Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0702000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:29072787:29076338:-1 gene:Os01g0702000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsBBD1 description:Protein of unknown function DUF151 domain containing protein. (Os01t0702000-01)
Sequence

ATGGAGATCATCAACGGGCCGGTTCTCCCGCGCTATGCTGCTCCGGCGACCGGCGCCCTG
ACCTCCGACGCGAAGATCAGCGGGCAGCTGCTTAGGCGCGTGCACCTGAGGAGACGAGCC
TGTGGGTTGCAGGGAGACCACTACCGGGCGGCGCGCAGGTTCTTCGGTTTCCCGTCCGAG
CGGCATGCGCGAAGCGGCTGGGTCTGGCCTGTTTGTTGCAGTTACGGCTCGTCTTCCGAC
GGGGACGGCGCCGCTGCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGC
GTGATGGAGGCTGTTGAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGAT
GGCAAAAACCTTAGATGTGTCCAAAACAACCCGCGGGTATTAAGATTGCGGGATTCTGCA
CCTCACCATGCTATTGTTCTGAAGATGGAAGATGGAAGTGATCTTTTGCTTCCAATTATC
GTCATGGAAACACCAAGTATTATGTTGCTGGCTGCCCTTCGGAACATTCGAATTCCAAGG
CCAACTATTTATAATGTGGTAAAGGAGATGACCGAAAGGATGGGATATGCGGTACGTTTG
GTGCGGATTACAGAAATGGTCCATGATGCATACTATTCTCGATTGTATCTTGCTAAGATT
GGCAATGAAGAGGAGACTATTAGCTTAGATCTCAAGCCATCAGATGCCATCAACATTGCT
TTCCGGTGTAAGGTTCCTATACAAGTGAATAGGCGTATAGCGTATAACAATGGATTGAAA
GTTGTACAACCAACACCATCTGAGAGCTATGTAAGCTCAGACCAATTCCAATACACAAGA
CTTGACAGGCCTGACGATCAACCTTGCTTTGAGGCCCAAGAGTTTGATTTGGTCCGCAAT
ATGCTGGTCGCTGCTGTTGAGGAACGCTACAAAGATGCTGCTCAATACAGAGATCAGCTT
TTCATGTTCCGGGCAAAGAAAAAGAACATGATTTAA

Peptide Sequence

PEP ID

Os01t0702000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:29072787:29076338:-1 gene:Os01g0702000 transcript:Os01t0702000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsBBD1 description:Protein of unknown function DUF151 domain containing protein. (Os01t0702000-01)
Sequence

MEIINGPVLPRYAAPATGALTSDAKISGQLLRRVHLRRRACGLQGDHYRAARRFFGFPSE
RHARSGWVWPVCCSYGSSSDGDGAAAADYDASGEEFVNSSVMEAVELRSVSDGFVIKMRD
GKNLRCVQNNPRVLRLRDSAPHHAIVLKMEDGSDLLLPIIVMETPSIMLLAALRNIRIPR
PTIYNVVKEMTERMGYAVRLVRITEMVHDAYYSRLYLAKIGNEEETISLDLKPSDAINIA
FRCKVPIQVNRRIAYNNGLKVVQPTPSESYVSSDQFQYTRLDRPDDQPCFEAQEFDLVRN
MLVAAVEERYKDAAQYRDQLFMFRAKKKNMI

Transcript Sequence

Transcript ID

Os01t0702000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29072787:29076338:-1 gene:Os01g0702000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsBBD1 description:Protein of unknown function DUF151 domain containing protein. (Os01t0702000-01)
Sequence

AACATTTGGCTAAAAAATTTTCGAGCCAAAAACTTTACCAAAATCCTCCGAAATTCCTGC
GTCTTTCAGCTCGGATCAGGCATTCAGGCCCTTCTCCCCGCCAGGATCGGTGGATGGAGA
TCATCAACGGGCCGGTTCTCCCGCGCTATGCTGCTCCGGCGACCGGCGCCCTGACCTCCG
ACGCGAAGATCAGCGGGCAGCTGCTTAGGCGCGTGCACCTGAGGAGACGAGCCTGTGGGT
TGCAGGGAGACCACTACCGGGCGGCGCGCAGGTTCTTCGGTTTCCCGTCCGAGCGGCATG
CGCGAAGCGGCTGGGTCTGGCCTGTTTGTTGCAGTTACGGCTCGTCTTCCGACGGGGACG
GCGCCGCTGCCGCGGATTACGACGCCAGCGGCGAGGAGTTCGTCAACTCCAGCGTGATGG
AGGCTGTTGAGCTCAGAAGTGTATCTGATGGATTTGTGATTAAAATGCGTGATGGCAAAA
ACCTTAGATGTGTCCAAAACAACCCGCGGGTATTAAGATTGCGGGATTCTGCACCTCACC
ATGCTATTGTTCTGAAGATGGAAGATGGAAGTGATCTTTTGCTTCCAATTATCGTCATGG
AAACACCAAGTATTATGTTGCTGGCTGCCCTTCGGAACATTCGAATTCCAAGGCCAACTA
TTTATAATGTGGTAAAGGAGATGACCGAAAGGATGGGATATGCGGTACGTTTGGTGCGGA
TTACAGAAATGGTCCATGATGCATACTATTCTCGATTGTATCTTGCTAAGATTGGCAATG
AAGAGGAGACTATTAGCTTAGATCTCAAGCCATCAGATGCCATCAACATTGCTTTCCGGT
GTAAGGTTCCTATACAAGTGAATAGGCGTATAGCGTATAACAATGGATTGAAAGTTGTAC
AACCAACACCATCTGAGAGCTATGTAAGCTCAGACCAATTCCAATACACAAGACTTGACA
GGCCTGACGATCAACCTTGCTTTGAGGCCCAAGAGTTTGATTTGGTCCGCAATATGCTGG
TCGCTGCTGTTGAGGAACGCTACAAAGATGCTGCTCAATACAGAGATCAGCTTTTCATGT
TCCGGGCAAAGAAAAAGAACATGATTTAACAGTTCCTGAAGGGAGGTGTACATACTAGTC
CCGCCTGAAGTGCATAAAGCCAAACATCAAGAAGAACTTTGTAAATACTTACAGAAGAAC
CTATACATAGATACATATACATACTAGAACATGATTTTGGGTGCTTTCAATTCGTGGTGG
CGTTGGTAGTAAAATTGACTCAAAAGGTGCCCATGTTTGTCACTCACGATTGATTTTAGC
AAAACGTTAAGCAAATTGCTTTACACG