Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0698300-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:28894263:28897172:1 gene:Os01g0698300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, BED-type predicted domain containing protein. (Os01t0698300-01);Similar to transposon protein. (Os01t0698300-02)
Sequence	AGCGAGAAGCTGAAGCTGCAGGATGCTCTGCTCAAGATCCCTTGCCGACTTAGTATCTCA GTTGATATGTGGCGATCGAATACACAGATGGACTTCTTGTGTTTGACCTGTCACTATATT GACCATGCCAATGATGAGTGGAAAGTTAGGAAAAAAATTCTGAACTTTGTGCATGTGGAG GCACCTTTTACAGATGATCAGATTGCTAGTCTCATTCTAGAGAAGTTGCGTGAGTGGGGT ATTGACAGGAAGCTAGCTGCCATTGTACTGGACAACTGCGCCTCTGGTGAGATTGTTGCT AGAGAGCTTCTCGTAGTTCTGCAGCCTAGGAGACTCCTCCTATTAAATGGGAATTTGTTC CAGGTGCGCTCTTGTGCGCACATTCTTAACCTCACAGTCCAAGAAAGCTTAGAACAGACA TCTGATATAATTACTAGAGTCCGTGAGATGATTCAGAATGTCAAGTTCTCACAAGAAAGG TTCGAAAAGTTTCAGGATACTGCAAAACTGTTGCAGATGGACCAAAAACTGCTAGTTCTT GATTCTCCTAATAACTGGCCGTCTACATACTTAATGTTTGATTCTGCATGTTACTATCAT GATGTTCTCATGCGCCTTGCAGAACAGGAAGCACATTATGGTGCTTTTCTCACTGCGAAG GAGTGGGCCGATGTGAAAGCCCTCACTGAAATACTTGATGCGCTCTATCATAAGATGGAG AAGTTTCCTGTGGAAAATCCGACTGCAAATCTCTATTTTAATGACATGTGTGAGGTGCAT GTTCTTTTGAATACCTGGCGTAATAGTCCATCTCCTGTTGTTGCACAAGTGGCTGACCGA ATGCTGACAAAATTTGAGGGGTACTGGGATCTTACTAGACCAGTAATGGCATTCGCATCT ATTCTGGATCCTCGATATAAGATGAAGTCTGTTGAGTACTTCTGTAGACTCATTTATGCT GCTGATCAATTTAGAGCAAAGACAACAATAGATGACATTCGGCAGAGTTTTACCAATTTG TGCAGTGAATATGAACAGTCAGGAAATTCATTCAAGAATCCATCTGCTCTCTTCTACTCT GCAACCAGTAATTCTTGCATGAGTTCGGTATACAGCAATGGTGATGATTTTAAGACCTTC TCCCGTATCACATTATCTGATGCTCGAAGGGGACTTGATCAATATATACAGGAGACGTCA TCAGGCCAATCCTTTAAGTCTGACTTAGACATGTACCTTGAGGAACCGGTCTATCGCCAA AAGGAAGGGCATTTAGATAATTTTGACATCCTGGGATGGTGGAAGTCCTTTGCAGCAAAG TATCCTGTCCTTTCTCAAATGGCTCGTGATATTTTAGCTGTCCCTGTATCTATCATCCCA TTGGACAGTGATGCTCGGACATTAAATGAGTATCTCAGTACCATGGACCCTTCAACAGTG CAGGGATTGGTATGTGCGCAAGATTGGTTGCGGGAAGATACAGAAGTTGCTAGTTCAGAC GGTCATGCAGATGACAAAGCGGCACGTGGTGATGAACTTATCGTGTTACCAAAATAG

Peptide Sequence

PEP ID	Os01t0698300-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:28894263:28897172:1 gene:Os01g0698300 transcript:Os01t0698300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, BED-type predicted domain containing protein. (Os01t0698300-01);Similar to transposon protein. (Os01t0698300-02)
Sequence	SEKLKLQDALLKIPCRLSISVDMWRSNTQMDFLCLTCHYIDHANDEWKVRKKILNFVHVE APFTDDQIASLILEKLREWGIDRKLAAIVLDNCASGEIVARELLVVLQPRRLLLLNGNLF QVRSCAHILNLTVQESLEQTSDIITRVREMIQNVKFSQERFEKFQDTAKLLQMDQKLLVL DSPNNWPSTYLMFDSACYYHDVLMRLAEQEAHYGAFLTAKEWADVKALTEILDALYHKME KFPVENPTANLYFNDMCEVHVLLNTWRNSPSPVVAQVADRMLTKFEGYWDLTRPVMAFAS ILDPRYKMKSVEYFCRLIYAADQFRAKTTIDDIRQSFTNLCSEYEQSGNSFKNPSALFYS ATSNSCMSSVYSNGDDFKTFSRITLSDARRGLDQYIQETSSGQSFKSDLDMYLEEPVYRQ KEGHLDNFDILGWWKSFAAKYPVLSQMARDILAVPVSIIPLDSDARTLNEYLSTMDPSTV QGLVCAQDWLREDTEVASSDGHADDKAARGDELIVLPK

Transcript Sequence

Transcript ID	Os01t0698300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:28894263:28897172:1 gene:Os01g0698300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, BED-type predicted domain containing protein. (Os01t0698300-01);Similar to transposon protein. (Os01t0698300-02)
Sequence	AAGCGAGAAGCTGAAGCTGCAGGATGCTCTGCTCAAGATCCCTTGCCGACTTAGTATCTC AGTTGATATGTGGCGATCGAATACACAGATGGACTTCTTGTGTTTGACCTGTCACTATAT TGACCATGCCAATGATGAGTGGAAAGTTAGGAAAAAAATTCTGAACTTTGTGCATGTGGA GGCACCTTTTACAGATGATCAGATTGCTAGTCTCATTCTAGAGAAGTTGCGTGAGTGGGG TATTGACAGGAAGCTAGCTGCCATTGTACTGGACAACTGCGCCTCTGGTGAGATTGTTGC TAGAGAGCTTCTCGTAGTTCTGCAGCCTAGGAGACTCCTCCTATTAAATGGGAATTTGTT CCAGGTGCGCTCTTGTGCGCACATTCTTAACCTCACAGTCCAAGAAAGCTTAGAACAGAC ATCTGATATAATTACTAGAGTCCGTGAGATGATTCAGAATGTCAAGTTCTCACAAGAAAG GTTCGAAAAGTTTCAGGATACTGCAAAACTGTTGCAGATGGACCAAAAACTGCTAGTTCT TGATTCTCCTAATAACTGGCCGTCTACATACTTAATGTTTGATTCTGCATGTTACTATCA TGATGTTCTCATGCGCCTTGCAGAACAGGAAGCACATTATGGTGCTTTTCTCACTGCGAA GGAGTGGGCCGATGTGAAAGCCCTCACTGAAATACTTGATGCGCTCTATCATAAGATGGA GAAGTTTCCTGTGGAAAATCCGACTGCAAATCTCTATTTTAATGACATGTGTGAGGTGCA TGTTCTTTTGAATACCTGGCGTAATAGTCCATCTCCTGTTGTTGCACAAGTGGCTGACCG AATGCTGACAAAATTTGAGGGGTACTGGGATCTTACTAGACCAGTAATGGCATTCGCATC TATTCTGGATCCTCGATATAAGATGAAGTCTGTTGAGTACTTCTGTAGACTCATTTATGC TGCTGATCAATTTAGAGCAAAGACAACAATAGATGACATTCGGCAGAGTTTTACCAATTT GTGCAGTGAATATGAACAGTCAGGAAATTCATTCAAGAATCCATCTGCTCTCTTCTACTC TGCAACCAGTAATTCTTGCATGAGTTCGGTATACAGCAATGGTGATGATTTTAAGACCTT CTCCCGTATCACATTATCTGATGCTCGAAGGGGACTTGATCAATATATACAGGAGACGTC ATCAGGCCAATCCTTTAAGTCTGACTTAGACATGTACCTTGAGGAACCGGTCTATCGCCA AAAGGAAGGGCATTTAGATAATTTTGACATCCTGGGATGGTGGAAGTCCTTTGCAGCAAA GTATCCTGTCCTTTCTCAAATGGCTCGTGATATTTTAGCTGTCCCTGTATCTATCATCCC ATTGGACAGTGATGCTCGGACATTAAATGAGTATCTCAGTACCATGGACCCTTCAACAGT GCAGGGATTGGTATGTGCGCAAGATTGGTTGCGGGAAGATACAGAAGTTGCTAGTTCAGA CGGTCATGCAGATGACAAAGCGGCACGTGGTGATGAACTTATCGTGTTACCAAAATAGTT GAGACTTCTGATTGATGGCTCCTGAGTCCTGAGGAGACCAAGGAGGCGAGGACGCAAGTA ACTGCATTATTTATGTTCAACAGTCCAATTTCCAGGCTTCCAGCTACACCCCTGTAAATG TATCGTTCTAGTTCTAGATCTGTTTGTACAATGAAGTCGTAGGTACCTCCAAGAAGGTAG TATCAATTTAGGCAATTGACTCTGCATTAATGACTTAATGTGTATTATGCTGCTAAGCTA AGTTATCTCCATCGTAGCTAAGTTATCTCC