Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0696000-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:28798884:28803859:1 gene:Os01g0696000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Calcium-activated outward-rectifying potassium channel 1 (AtKCO1). (Os01t0696000-01);Conserved hypothetical protein. (Os01t0696000-02)
Sequence

ATGGCCTTCGCCGTCGCGCCGCCGGTAGCGCCGCCTCCACCTTCTCCCGCGGCGGCATGG
GGGAGGCGCCGCGCGAGGGCAACTCCTCCGCGGTTCGCGCTGGCGGCATCTACCAGAGAC
GGCGACCCGGCCCCGCCGACGTTCGAGCGGCTGCGGGAGCAGCTCCTACAGCTCCACGCA
GAAGCCGACCTCACCCAATCCAAAGCAAATAGCACGAGGGTAAGGCTTGTGCGGTTGACT
GAGGCTGCTGAGAATCTTAAGAAAAGAGCTGCGGTCAGCATCCGAATGGGCAAAGAGAAT
GAGGCAGTGGATTTACTTGTGCAAAAGAAGAAGCTGACCAAAGCTCTTGAAAGCATAAAA
CAGCGCATTGAGGTGCTTGATAAGCTTTCCATGAAAATCAGTGAGGCAATTTCAGTGAAG
CAGAACATGTTAATTGAACATGCATTGCATCCAGGGATGTCTAATGGCAAAGAATCCAAT
GACAACATAAGAGTTTTCTCTAGTAAAGTTGGTGATGAGGCTGATGAGACTACTAGCTCT
CCTGCGAAATCATCTGAAAAGGCATTTGATCTGCAACATGTGGTGCATTCAGGCATGACT
GGCCAGTTGGAGCAAAGTGAACTTCAGACGTCCGATAGCTTCTCATTTTCCAGTGATCTT
GAATCACCAAACAGCATAACTAACCATTCTTCTTATGATGCTTTTCTAGACCATATTGGT
TTTCAGCTGGATTCATTAGAATGTGAAATTGAACAATATATCAGTTCCCAACTAGCAGAA
CAGGTGGACATTCAGAAGCCAATAAATGCCAAGTGGCAAAAATTGTCTGACGTATTGAAG
CTTGTAACTGAAACTAGAGAAAGGATTGCAAAGATTGTGGATAATACAGTAAAGGAGGCT
GGATCTGAGGACTGA

Peptide Sequence

PEP ID

Os01t0696000-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:28798884:28803859:1 gene:Os01g0696000 transcript:Os01t0696000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Calcium-activated outward-rectifying potassium channel 1 (AtKCO1). (Os01t0696000-01);Conserved hypothetical protein. (Os01t0696000-02)
Sequence

MAFAVAPPVAPPPPSPAAAWGRRRARATPPRFALAASTRDGDPAPPTFERLREQLLQLHA
EADLTQSKANSTRVRLVRLTEAAENLKKRAAVSIRMGKENEAVDLLVQKKKLTKALESIK
QRIEVLDKLSMKISEAISVKQNMLIEHALHPGMSNGKESNDNIRVFSSKVGDEADETTSS
PAKSSEKAFDLQHVVHSGMTGQLEQSELQTSDSFSFSSDLESPNSITNHSSYDAFLDHIG
FQLDSLECEIEQYISSQLAEQVDIQKPINAKWQKLSDVLKLVTETRERIAKIVDNTVKEA
GSED

Transcript Sequence

Transcript ID

Os01t0696000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:28798884:28803859:1 gene:Os01g0696000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Calcium-activated outward-rectifying potassium channel 1 (AtKCO1). (Os01t0696000-01);Conserved hypothetical protein. (Os01t0696000-02)
Sequence

CCAAGCCCATCTGGACGCTCACCGGAGATGGCCTTCGCCGTCGCGCCGCCGGTAGCGCCG
CCTCCACCTTCTCCCGCGGCGGCATGGGGGAGGCGCCGCGCGAGGGCAACTCCTCCGCGG
TTCGCGCTGGCGGCATCTACCAGAGACGGCGACCCGGCCCCGCCGACGTTCGAGCGGCTG
CGGGAGCAGCTCCTACAGCTCCACGCAGAAGCCGACCTCACCCAATCCAAAGCAAATAGC
ACGAGGGTAAGGCTTGTGCGGTTGACTGAGGCTGCTGAGAATCTTAAGAAAAGAGCTGCG
GTCAGCATCCGAATGGGCAAAGAGAATGAGGCAGTGGATTTACTTGTGCAAAAGAAGAAG
CTGACCAAAGCTCTTGAAAGCATAAAACAGCGCATTGAGGTGCTTGATAAGCTTTCCATG
AAAATCAGTGAGGCAATTTCAGTGAAGCAGAACATGTTAATTGAACATGCATTGCATCCA
GGGATGTCTAATGGCAAAGAATCCAATGACAACATAAGAGTTTTCTCTAGTAAAGTTGGT
GATGAGGCTGATGAGACTACTAGCTCTCCTGCGAAATCATCTGAAAAGGCATTTGATCTG
CAACATGTGGTGCATTCAGGCATGACTGGCCAGTTGGAGCAAAGTGAACTTCAGACGTCC
GATAGCTTCTCATTTTCCAGTGATCTTGAATCACCAAACAGCATAACTAACCATTCTTCT
TATGATGCTTTTCTAGACCATATTGGTTTTCAGCTGGATTCATTAGAATGTGAAATTGAA
CAATATATCAGTTCCCAACTAGCAGAACAGGTGGACATTCAGAAGCCAATAAATGCCAAG
TGGCAAAAATTGTCTGACGTATTGAAGCTTGTAACTGAAACTAGAGAAAGGATTGCAAAG
ATTGTGGATAATACAGTAAAGGAGGCTGGATCTGAGGACTGAGGTCATAGCGAAGTATAT
AAAGCAATGTATTGATGACATCAAACCCTGTTTCTTTTATTTGTAACATGGTATATGGTT
TCATGGAAAATTTGTGCAATACCTTACAGAAGCATCATGGTCTAGGTCTGCAGCCAGTGG
CTCATTGTCCATTTTCTTCTGGAGGATCCATTTTGTAGTTTTTCGGTTCCTTCTATCCAT
CCTTAGATCTGTTAGGAACAGGAAGGCCTTGGCAACTGCCAAAGTGCTCACTAACAAACA
CACTGTTGCAGAGAGCCTTCCTGCTGGTGTTGAGAAGCCATAATCCCCATATCCAACTGT
TGTCACAGAAATGACTGATAAATAGAAGCTATCAATCCAATTTAGACCCTCCACCTCATG
CACTATGATTGTACAAATTGAGATGGTGCCTACAACAACCCCTAACGCAAGTAGTACTTT
CATCCTCCCTCTTGATCTTTTCTTTTCAGCATCAATCATATAGGTGTCAAATACCCTATT
AAGCTTGTTATCATCCATTGTGCTAAGTAAGACTGTTCTCTGCTTGTCAAGTACATTTGT
CAACAGCTCATTTAGCACAATGTCAACAAAGCGAACACCGATTAGTAGAAACAAGCATGT
GAACACCTTTGTGAAGGTAGTGCAAGGGACTATGTCACCGTATCCTATGGTGCACAAGCT
TATGATGGTGAAGTAAAGGCCATCAACTAACTTCAGTGTGGACCTCCCCTTGAAGCCTTC
AACATTTGTGATGTATACAAGGACTCCTATTGAGATGTACAAGATGACGCTAACGATAGC
CTGCCTTGCAAATGATGGTACGTGTTGTGCAGCATGGCTTTGCTCATTGAACTCATCTGC
ACAGGGAGTTTCTTTGATTGATGTGAACATAGAAGGAGAAGAATGCACCCGCTGGAAATT
TTGTGCGGTAACTATATTGCCATTTCCGCTAGTATGTAACGGATGATTGGGAGTATTGGG
GTTACCTTTGCTATTTGTACTTGGGTGAAAGGAAGTCACGAACCTGTTTGGGACATCGGA
GGATTTTCTTCTGTCTTGTCTTGAAGAGTATACTTGATCACGGTGGACTACAGGCAGCAG
GTGCTCTTCCATGGTAGACATGTTAGATCTTGGATTCATCAGCTCACAGCTTGCAGTTCT
CAGGACTGTACTCATCAATTTATATCCATGGCAGTTCTGCTGTGATCTCGGTGATGGAAT
TGGTAACCACGAGATGGTCGTCAATCAAGGATGTACACTTACCTGCTCTTTCTGGGTTGA
AAGGAGTGTATCAAATCTCAAAACATATCTTTCTTATTTATTGCAACATTTATATCACGT
AGTTTCCAGTATATTGCATAGTAGCTGATACAAGAGGCAATTGATGAAAGGGAAGGAAAA
GACGGATATCAAGATTAACAATGGCTTGTTAGCATTCTGATTTTGCAAGTTGGCCTTCCC
TTCTCTGGGATGATCCATTGACATAAAGGCAATGCCATATTCTCCAGGACTCTGTTCTAC
AACAGGGGTTGCCTTTTTCTGGATGGGAACATGTCAGTTTCTTGCGGCTATGAGATCTTA
TTGCCGGTGAGGGAGGTAAATGCTGCGCCGACGGAAAGGTTCTCAAGCTGGGGATCCCTG
TTTCCGTGTCATCTATGTATCTTCGAGCTGTCTTTTTCTGACGGATCTTGACTGGAGTAT
CTTGTCCCTGATGATCAGTCTCTGCGTGACACTCTGAAGAAAAGGCTGTGCAGATGAAAA
CTGTAAGACCTTGCCTAGAGGCTAGAATATAACCGAGCACTGGAGTATTTTAGAGAACCG
GGCAAGCAAGCATTCTTCAGCCTTCCAGCTTCCTGGCATAAATGTTGATGAATTTGTCGC
CATGAATATCTATTAGCCCCTAACAAACTTATCTAGCTTGATCATCTATCTCGTTGATTA
AGACACAGTTTCCACCTGGGGACCGTGTGATCGACGGAGTCCTGAAATTTGTTACTGAAG
CAGTCAAGCAGAGGATGTAATACTGTGCTGTAACCAGATCTTCACGTTGTTCGCTAGACC
GGCAAACCGGCATTACTACATATGGTCTGATTGGAATTTG