Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0695900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:28796526:28797649:1 gene:Os01g0695900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:myb transcription factor 4, transcription factor MYB4, endosperm-specific gene 11, GLABRA1C, GLABRA 1C description:OSMYB4. (Os01t0695900-01)
Sequence	ATGAAGCGGAAGCGGCCGGCGGCGCTGCGCGGCGGGGAGGAGGCGGCGGCGGCGGCGCTG AAGCGTGGGCCGTGGACGCCCGAGGAGGACGAGGTGCTGGCGCGGTTCGTGGCGCGGGAG GGGTGCGACCGGTGGCGCACGCTGCCGCGGCGCGCGGGCCTGCTGCGCTGCGGCAAGAGC TGCCGCCTCCGGTGGATGAACTACCTCCGCCCCGACATCAAGCGCTGCCCCATCGCCGAC GACGAGGAGGACCTCATCCTCCGCCTCCACCGCCTCCTCGGCAACCGGTGGTCGCTGATC GCCGGGAGGTTGCCGGGGCGCACGGACAACGAGATCAAGAACTACTGGAACTCGCATCTC AGCAAGAAGCTCATCGCGCAGGGCATCGACCCGCGGACGCACAAGCCGCTGACGGCCGCC GCCGATCACTCCAACGCCGCCGCTGCCGTCGCCGCCACTTCTTACAAGAAGGCGGTGCCG GCCAAGCCGCCGAGGACGGCATCCTCGCCGGCCGCTGGCATTGAGTGCAGCGACGATCGT GCCCGACCGGCCGACGGTGGCGGTGACTTCGCAGCGATGGTGAGCGCCGCCGATGCCGAG GGATTCGAAGGAGGATTTGGCGATCAGTTCTGTGCCGAGGATGCAGTTCATGGTGGCTTC GACATGGGTTCCGCTTCCGCCATGGTGGGTGACGACGACTTCTCCTCGTTTCTTGATTCT CTGATCAACGACGAGCAGTTAGGCGATCTCTTCGTCGTCGAGGGCAACGATCACGAGCAT GGCAATGGTGAGATTGGTCATGGAGACGTCATGGAATCCAAACAGTAA

Peptide Sequence

PEP ID	Os01t0695900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:28796526:28797649:1 gene:Os01g0695900 transcript:Os01t0695900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:myb transcription factor 4, transcription factor MYB4, endosperm-specific gene 11, GLABRA1C, GLABRA 1C description:OSMYB4. (Os01t0695900-01)
Sequence	MKRKRPAALRGGEEAAAAALKRGPWTPEEDEVLARFVAREGCDRWRTLPRRAGLLRCGKS CRLRWMNYLRPDIKRCPIADDEEDLILRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSHL SKKLIAQGIDPRTHKPLTAAADHSNAAAAVAATSYKKAVPAKPPRTASSPAAGIECSDDR ARPADGGGDFAAMVSAADAEGFEGGFGDQFCAEDAVHGGFDMGSASAMVGDDDFSSFLDS LINDEQLGDLFVVEGNDHEHGNGEIGHGDVMESKQ

Transcript Sequence

Transcript ID	Os01t0695900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:28796526:28797649:1 gene:Os01g0695900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:myb transcription factor 4, transcription factor MYB4, endosperm-specific gene 11, GLABRA1C, GLABRA 1C description:OSMYB4. (Os01t0695900-01)
Sequence	AAGCTAGCTCGCGCGCAAATTAATCGCCGATCGATCCTACGATGAAGCGGAAGCGGCCGG CGGCGCTGCGCGGCGGGGAGGAGGCGGCGGCGGCGGCGCTGAAGCGTGGGCCGTGGACGC CCGAGGAGGACGAGGTGCTGGCGCGGTTCGTGGCGCGGGAGGGGTGCGACCGGTGGCGCA CGCTGCCGCGGCGCGCGGGCCTGCTGCGCTGCGGCAAGAGCTGCCGCCTCCGGTGGATGA ACTACCTCCGCCCCGACATCAAGCGCTGCCCCATCGCCGACGACGAGGAGGACCTCATCC TCCGCCTCCACCGCCTCCTCGGCAACCGGTGGTCGCTGATCGCCGGGAGGTTGCCGGGGC GCACGGACAACGAGATCAAGAACTACTGGAACTCGCATCTCAGCAAGAAGCTCATCGCGC AGGGCATCGACCCGCGGACGCACAAGCCGCTGACGGCCGCCGCCGATCACTCCAACGCCG CCGCTGCCGTCGCCGCCACTTCTTACAAGAAGGCGGTGCCGGCCAAGCCGCCGAGGACGG CATCCTCGCCGGCCGCTGGCATTGAGTGCAGCGACGATCGTGCCCGACCGGCCGACGGTG GCGGTGACTTCGCAGCGATGGTGAGCGCCGCCGATGCCGAGGGATTCGAAGGAGGATTTG GCGATCAGTTCTGTGCCGAGGATGCAGTTCATGGTGGCTTCGACATGGGTTCCGCTTCCG CCATGGTGGGTGACGACGACTTCTCCTCGTTTCTTGATTCTCTGATCAACGACGAGCAGT TAGGCGATCTCTTCGTCGTCGAGGGCAACGATCACGAGCATGGCAATGGTGAGATTGGTC ATGGAGACGTCATGGAATCCAAACAGTAATCTTTCGGGAGATTGATCAGGGAATAAGTTG ACCATGAGAAAACATGTAAGAACAGCTTGTCTGCTGAGTCATGACCGGTGATGTGTATGT GATGGAAGAAAACGTATGTACGACTTAATGCTTGCACCTATACTACTGCTGTGTGCATTA TTCGAGTGATC