Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0691600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:28545585:28553746:1 gene:Os01g0691600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Xeroderma pigmentosum (XP) complementation group of protein B2 description:Similar to DNA repair helicase XPB2 (EC 3.6.1.-) (XPB homolog 2) (ERCC3 homolog 2) (RAD25 homolog 2) (AtXPB2). (Os01t0691600-01);Similar to XPB1 (ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1); ATP-dependent helicase. (Os01t0691600-02)
Sequence	ATGGCCGGCGGCGACGGCGATCGCGCCCGCGCGCCGAAGCGGCACAAGTCCTCGGCGCCG TCGAGGTCGATTGACGAGACCGCCGAACTGGACTACACCGATGACGTCGATGACGACGTC CGCGATGCCGATAGGGAGGTGAAGAAGAGGGACTTCACCAAGCTAGAGCTGAAGCCGGAT CACGCGAACAGGCCGCTCTGGGCCTGCGCCGATGGCCGCATCTTCCTGGAGACGTTTTCG CCCCTATACAAACAAGCCTACGATTTCTTGATCGCTATTGCGGAGCCTGTTTGCAGGCCA GAATCCATGCACGAGTACAATCTAACACCCCACTCACTATATGCTGCGGTCTCAGTTGGG CTTGAGACTAGCACTATAATCAGTGTCATGAGCAAGCTCTCCAAGACTAAACTGCCTCGT GAAATAATTGATTTTATCCATGCATCAACTGCCAATTATGGTAAAGTGAAGCTTGTTCTG AAGAAGAATCGATATTTTGTGGAGTCTCCATTCCCTGAGGTTTTGAAGACGCTTCTGAAA GATGATATCATTTGCAGAGCACGGATATCTCCTGAGGATTCCGTTGGGGCACCTTCATTT ACTATTAGCAAAACAGCTGGTGAAATGGCTAGTGGCCATGAGGACTTATTAGATGGAATG GAACTGGCTGCTGCAACTGAAGACAAGGAAACACATTCTTTTGAAATTGATCCTTCTCAG GTTGAGAATGTGAAGCAGCGTTGCTTGCCAAATGCACTGAACTTCCCCATGCTGGAGGAG TACGATTTTAGAAACGACACAGTGAATCCAGATTTGGAGATGGAATTAAAGCCCCAGGCA CGCCCAAGGCCATATCAAGAAAAGAGCCTCAGCAAGATGTTTGGGAATGGCAGAGCAAGG TCAGGCATTATTGTGTTACCTTGTGGTGCTGGCAAGTCCTTGGTTGGTGTATCTGCTGCA TGTCGTATCAAGAAGAGTTGTCTATGTTTGGCCACAAATGCTGTATCAGTTGATCAATGG GCATTTCAGTTCAAGCTTTGGTCAACTATAAAAGATGAACATATCAGCCGTTTTACATCA GATAACAAGGAGAAATTCCGTGGAATGGCCGGTGTAGTTGTGACTACATATAACATGGTT GCATTTGGAGGTAAACGGTCTGAAGACTCTGAGAAGATAATTGAAGAAATTCGAAATAGG GAGTGGGGCTTGCTCCTAATGGATGAGGTCCATGTTGTTCCTGCACATATGTTCAGAAAG GTCATCAGCATTACAAAATCTCACTGCAAGCTTGGTCTTACTGCTACACTTGTGAGAGAG GATGAACGCATCACTGATTTAAATTTTCTTATTGGACCAAAGCTGTATGAAGCAAACTGG TTGGATTTAGTGAAAGGTGGATTTATTGCAAATGTGCAGTGTGCCGAAGTTTGGTGTCCC ATGACCAAAGAGTTCTTTGCTGAGTATTTGAAAAAAGAAAATTCAAAGAAGAAGCAGGTC CTCTATGCGATGAACCCAAACAAATTCAGAGCTTGCGAGTTTCTAATTCGATTCCATGAG CAACAACGTGGGGACAAGATAATTGTGTTTGCCGATAATCTATTTGCACTAACTAGCTAC GCAATGAAGCTCCGTAAACCAATGATTTATGGTTCCACAAGCCATGTTGAGAGGACGAGA ATTCTGCATCAATTCAAGAACAGCTCAGATGTGAATACAATTTTCCTTTCAAAGGTGCAG TAA

Peptide Sequence

PEP ID	Os01t0691600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:28545585:28553746:1 gene:Os01g0691600 transcript:Os01t0691600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Xeroderma pigmentosum (XP) complementation group of protein B2 description:Similar to DNA repair helicase XPB2 (EC 3.6.1.-) (XPB homolog 2) (ERCC3 homolog 2) (RAD25 homolog 2) (AtXPB2). (Os01t0691600-01);Similar to XPB1 (ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1); ATP-dependent helicase. (Os01t0691600-02)
Sequence	MAGGDGDRARAPKRHKSSAPSRSIDETAELDYTDDVDDDVRDADREVKKRDFTKLELKPD HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG LETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLLK DDIICRARISPEDSVGAPSFTISKTAGEMASGHEDLLDGMELAAATEDKETHSFEIDPSQ VENVKQRCLPNALNFPMLEEYDFRNDTVNPDLEMELKPQARPRPYQEKSLSKMFGNGRAR SGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDEHISRFTS DNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFRK VISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP MTKEFFAEYLKKENSKKKQVLYAMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTSY AMKLRKPMIYGSTSHVERTRILHQFKNSSDVNTIFLSKVQ

Transcript Sequence

Transcript ID	Os01t0691600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:28545585:28553746:1 gene:Os01g0691600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Xeroderma pigmentosum (XP) complementation group of protein B2 description:Similar to DNA repair helicase XPB2 (EC 3.6.1.-) (XPB homolog 2) (ERCC3 homolog 2) (RAD25 homolog 2) (AtXPB2). (Os01t0691600-01);Similar to XPB1 (ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1); ATP-dependent helicase. (Os01t0691600-02)
Sequence	GGCGACGAGAAGACGAAACTGCCCCGTGCGCCGCCAACATCTCCCCTCTCCGGCTACCGC CGCCACCGCGCCGCCGCGCTCCTCGCTCCTCGCTCCAGGGCTTCCGGCCATGGCCGGCGG CGACGGCGATCGCGCCCGCGCGCCGAAGCGGCACAAGTCCTCGGCGCCGTCGAGGTCGAT TGACGAGACCGCCGAACTGGACTACACCGATGACGTCGATGACGACGTCCGCGATGCCGA TAGGGAGGTGAAGAAGAGGGACTTCACCAAGCTAGAGCTGAAGCCGGATCACGCGAACAG GCCGCTCTGGGCCTGCGCCGATGGCCGCATCTTCCTGGAGACGTTTTCGCCCCTATACAA ACAAGCCTACGATTTCTTGATCGCTATTGCGGAGCCTGTTTGCAGGCCAGAATCCATGCA CGAGTACAATCTAACACCCCACTCACTATATGCTGCGGTCTCAGTTGGGCTTGAGACTAG CACTATAATCAGTGTCATGAGCAAGCTCTCCAAGACTAAACTGCCTCGTGAAATAATTGA TTTTATCCATGCATCAACTGCCAATTATGGTAAAGTGAAGCTTGTTCTGAAGAAGAATCG ATATTTTGTGGAGTCTCCATTCCCTGAGGTTTTGAAGACGCTTCTGAAAGATGATATCAT TTGCAGAGCACGGATATCTCCTGAGGATTCCGTTGGGGCACCTTCATTTACTATTAGCAA AACAGCTGGTGAAATGGCTAGTGGCCATGAGGACTTATTAGATGGAATGGAACTGGCTGC TGCAACTGAAGACAAGGAAACACATTCTTTTGAAATTGATCCTTCTCAGGTTGAGAATGT GAAGCAGCGTTGCTTGCCAAATGCACTGAACTTCCCCATGCTGGAGGAGTACGATTTTAG AAACGACACAGTGAATCCAGATTTGGAGATGGAATTAAAGCCCCAGGCACGCCCAAGGCC ATATCAAGAAAAGAGCCTCAGCAAGATGTTTGGGAATGGCAGAGCAAGGTCAGGCATTAT TGTGTTACCTTGTGGTGCTGGCAAGTCCTTGGTTGGTGTATCTGCTGCATGTCGTATCAA GAAGAGTTGTCTATGTTTGGCCACAAATGCTGTATCAGTTGATCAATGGGCATTTCAGTT CAAGCTTTGGTCAACTATAAAAGATGAACATATCAGCCGTTTTACATCAGATAACAAGGA GAAATTCCGTGGAATGGCCGGTGTAGTTGTGACTACATATAACATGGTTGCATTTGGAGG TAAACGGTCTGAAGACTCTGAGAAGATAATTGAAGAAATTCGAAATAGGGAGTGGGGCTT GCTCCTAATGGATGAGGTCCATGTTGTTCCTGCACATATGTTCAGAAAGGTCATCAGCAT TACAAAATCTCACTGCAAGCTTGGTCTTACTGCTACACTTGTGAGAGAGGATGAACGCAT CACTGATTTAAATTTTCTTATTGGACCAAAGCTGTATGAAGCAAACTGGTTGGATTTAGT GAAAGGTGGATTTATTGCAAATGTGCAGTGTGCCGAAGTTTGGTGTCCCATGACCAAAGA GTTCTTTGCTGAGTATTTGAAAAAAGAAAATTCAAAGAAGAAGCAGGTCCTCTATGCGAT GAACCCAAACAAATTCAGAGCTTGCGAGTTTCTAATTCGATTCCATGAGCAACAACGTGG GGACAAGATAATTGTGTTTGCCGATAATCTATTTGCACTAACTAGCTACGCAATGAAGCT CCGTAAACCAATGATTTATGGTTCCACAAGCCATGTTGAGAGGACGAGAATTCTGCATCA ATTCAAGAACAGCTCAGATGTGAATACAATTTTCCTTTCAAAGGTGCAGTAACTGATATT CTGATTCAAAACATACTTTTGTAAATTCAACCATCATCATCTTAACTGCATATCTACTGT CACTTAGGTGGGTGATAACTCGATTGATATTCCAGAAGCAAATGTGATCATACAAATTTC ATCTCATGCTGGTTCACGGCGTCAAGAAGCTCAACGGTTGGGACGTATTCTCAGGGCAAA GGGTAAGCATCAAGACAGGATGGCTGGTGGAAAAGAAGAATACAATGCGTTCTTCTACTC TCTTGTATCGACTGACACTCAGGAGATGTACTACTCAACTAAAAGGCAACAATTTCTTAT TGACCAGGGATATAGCTTCAAGGTGATCACCAGCTTGCCGCCACCTGAAGAATTACCTAA CCTGAAATATTACACACTTAATGATCAGCTTGAACTTTTGGCACAAGTAGGTGTTTTCTG TACCTGTTGTTTGTAAGCTGCTACTTCTTTATTTCTAATTGTGCAAGCTTGCTTGTAAAC TCACTTCGCCACTTAAACCAGTTGCTGAGTGCAAGGGATGACATGATTGGCATTGAGCAC TTGGAAGAGGATTCTGATGGCAAGGCTCTTATGAAAGCACGGCGATCTGCTGGATCAATG AGTGCCTTTTCTGGATCGGGGGGAATGGTCTACATGGAGTACAGCACTGGTAAGGGGAAG GCTGGAGCTTCCAAGAAACCGAAGGACCCTTCAAAGAGGCATTACCTGTTTAAGAAGCGT TATCAATGATCTTGATAACCGGCGTTGTTTCCTTCCTTTGCCTATCTCATCTGCAAAAAT ACTGAATACGAGTTATGGTTAAGGAATTCCAATGATTAACGTGGAGTGGGGGAGGTTCCC ATTAGCGCATCGACCAGCATTTTTGTTAACTTGCCGAGATATTTGCATCAACATCCAACG GCAATAAGCACTTATTTGGTCGCACGCCCTTGTGTTTGCTAATGAGAAAAAACTTGGCAT TTGCCTTGGTCCTGAAGATGTAAATACTGTTGATGCAAATACTTCTGTAAGGCTTATATG ACATCTAGTTATTTTCCGGACGTGAACGC