Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0687700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:28370919:28374507:-1 gene:Os01g0687700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF292, eukaryotic domain containing protein. (Os01t0687700-01)
Sequence

ATGTCGTCCCTCAACTCGCTCTTCAACCGCTCCACCTTCGGTACCAAATGCAAAACATGC
TTGAATTTAGTCATTTCGAGGATCAAGCTGCTGCGCAACAGGAGGGAGTTGCAGCTAATA
AATATGCGCAAAGAGATGGTTCAGTATCTTCAGACAGGCCAGGAATCGATAGCAAGGATT
CGGGTGGAGCACATTATTCGAGAGCAAAATATATTGGCTGCATATGAGATTGTTGAGCTT
TTCTGCGAATTTGTGCTGGCAAGGGTCCCTATTGTTGAGGTCCAAAAGGAATGCCCCTTC
GAACTACGGGAAGCAATAGCTAGTATAATATTTGCATCAGGGAGATGTTCAGACTTGCCT
GAGCTAATGCATCTCCGTACTTTGTTCACCACCAAATATGGCAAGGAATTTGTTGCTGCA
GCTATGGAATTGCGTCCTGACAGCGGTGTTAATCGTACAATAATCGAGAAGCTCTCAGTG
AAGGCCCCATCAGCTGAATCAAAGCTGAAGGTTCTGAAAGCTATTGCTCAAGAGTATGGC
CTTGAATGGGACTCATCGAATACTGAAGCAGAGCTTAACAAGAAATACGAAGATCTGCTG
GATGGATCAGGATCCTCAGCACGCCAGGGCCAGTTACCTATAATCGAGAACTCTCCAGTT
GCTTCCATTTCCAGAGATATGCCATCGTTGTCCATTTCACCTGTCGAGGACACTGGAAAA
TATCAAGCTGCTCCCCAGTCCCCAAGCTCACCTGCTGGGTCTGCAGTAATGCATGCGGCT
ACCAAGAGTAACATGGTGAGCCAGGAGCATCATCGCTCCCCTGCTGATGAGATATCGTGC
GCAACCCCAAGTTCGTCGGACGTTCTTGAAAAAGCCCGAGCTGCCATTGCTGCAGCCAAC
CGCGCCTCCGCCGCTGCCCGTGCAGCCGCGGACCTTGTAAAGGTCAAAATTACAAGCTAG

Peptide Sequence

PEP ID

Os01t0687700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:28370919:28374507:-1 gene:Os01g0687700 transcript:Os01t0687700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF292, eukaryotic domain containing protein. (Os01t0687700-01)
Sequence

MSSLNSLFNRSTFGTKCKTCLNLVISRIKLLRNRRELQLINMRKEMVQYLQTGQESIARI
RVEHIIREQNILAAYEIVELFCEFVLARVPIVEVQKECPFELREAIASIIFASGRCSDLP
ELMHLRTLFTTKYGKEFVAAAMELRPDSGVNRTIIEKLSVKAPSAESKLKVLKAIAQEYG
LEWDSSNTEAELNKKYEDLLDGSGSSARQGQLPIIENSPVASISRDMPSLSISPVEDTGK
YQAAPQSPSSPAGSAVMHAATKSNMVSQEHHRSPADEISCATPSSSDVLEKARAAIAAAN
RASAAARAAADLVKVKITS

Transcript Sequence

Transcript ID

Os01t0687700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:28370919:28374507:-1 gene:Os01g0687700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF292, eukaryotic domain containing protein. (Os01t0687700-01)
Sequence

GGTCCTTCCTTCCTCCCCTACCTCCCCTTTGCGCTTGACATCGCCGGGTGGATCAGCGGC
GGAGGCTGCCAGCGATGTCGTCCCTCAACTCGCTCTTCAACCGCTCCACCTTCGGTACCA
AATGCAAAACATGCTTGAATTTAGTCATTTCGAGGATCAAGCTGCTGCGCAACAGGAGGG
AGTTGCAGCTAATAAATATGCGCAAAGAGATGGTTCAGTATCTTCAGACAGGCCAGGAAT
CGATAGCAAGGATTCGGGTGGAGCACATTATTCGAGAGCAAAATATATTGGCTGCATATG
AGATTGTTGAGCTTTTCTGCGAATTTGTGCTGGCAAGGGTCCCTATTGTTGAGGTCCAAA
AGGAATGCCCCTTCGAACTACGGGAAGCAATAGCTAGTATAATATTTGCATCAGGGAGAT
GTTCAGACTTGCCTGAGCTAATGCATCTCCGTACTTTGTTCACCACCAAATATGGCAAGG
AATTTGTTGCTGCAGCTATGGAATTGCGTCCTGACAGCGGTGTTAATCGTACAATAATCG
AGAAGCTCTCAGTGAAGGCCCCATCAGCTGAATCAAAGCTGAAGGTTCTGAAAGCTATTG
CTCAAGAGTATGGCCTTGAATGGGACTCATCGAATACTGAAGCAGAGCTTAACAAGAAAT
ACGAAGATCTGCTGGATGGATCAGGATCCTCAGCACGCCAGGGCCAGTTACCTATAATCG
AGAACTCTCCAGTTGCTTCCATTTCCAGAGATATGCCATCGTTGTCCATTTCACCTGTCG
AGGACACTGGAAAATATCAAGCTGCTCCCCAGTCCCCAAGCTCACCTGCTGGGTCTGCAG
TAATGCATGCGGCTACCAAGAGTAACATGGTGAGCCAGGAGCATCATCGCTCCCCTGCTG
ATGAGATATCGTGCGCAACCCCAAGTTCGTCGGACGTTCTTGAAAAAGCCCGAGCTGCCA
TTGCTGCAGCCAACCGCGCCTCCGCCGCTGCCCGTGCAGCCGCGGACCTTGTAAAGGTCA
AAATTACAAGCTAGTGACGCACTGACGCCTGCTGTTGTGGCGAACCAAGGCAAGTTGCGT
GGTTTGAGATTGTGGCAACTCGGGTTTATTACTGACTATACACATGCTTAATTTGAATGA
CAAAGTGTGGCTTAAACAAACGAGAAAGTGTATTACTGTATACCACTCTCTTGGCATTTC
AACTGAGTTAGTGTGGCTTTTGCCTTTCTGTTC