Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0684900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:28235071:28238631:-1 gene:Os01g0684900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os01t0684900-01)
Sequence	ATGGCCGCGGCCGCGAGGGAGGAGCAGCCGCTGCTGCTGCGGCGGGAGGAGGGGGAGGAG GAGGGTGAGGAGGTTGGGTGGAGGAGGAGGTGGGGGAGCGAGGCCGGGAAGCTGGCGTAC CTGGCGCTGCCGATGGTGGCGGTGAGCCTGACGAACTACGCGGTGCAGGTGTTCTCCAAC ATGATGGTCGGCCACCTCCCCGGCGTCCTCCCGCTCTCCTCCGCCGCCATCGCCACCTCC CTCGCCTCCGTCACCGGCTTCAGCCTCCTCATTGGAATGGCAAGTGCACTGGAAACTCTC TGTGGCCAAGCTTATGGGGCAAAACAATACCATACTCTGGGAGTGCACACCTACAGAGCC ATACTCACTCTTCTGGTGGTGTGCATTCCTCTATCACTTCTATGGGTTTTCATGGGCAAA ATCCTGGTACTCATTGGTCAAGATCCTTTGATCTCGCATGGAGCTGGGAGATACATCGTC TGGCTGATTCCAGGGCTTTTCGCAAACGCGTTGATTCAGCCTATCACGAAGTTCCTTCAG TCCCAGAGCTTGATAATGCCCATGCTCGTTGCATCCGTTGCAACCCTGGTGTTCCACATC CCTCTGTGCTGGTTGATGGTGTTTAAGACCGGCTTGGGGTATACTGGAGCTGCCTTGTCG ATAAGCATATCATACTGGTTGAATGTGGCCATGCTTGTGGCTTATATCTTGCTGTCAAGC TCTTGCAAGGAAACACGCACACCTCCAACAATCGAGGCCTTCAAGGGATTGGATGGGTTC TTACGTCTAGCATTGCCATCTGCGCTTATGATTTGTCTTGAGTGGTGGTCATTTGAGCTA CTTATTCTTATGTCAGGACTTTTACCCAACCCCGAGCTACAAACCTCAGTGCTTTCAATT TGTCTCACAAGTATAACTTTACTTTTTACCATTCCTTATGGGCTTGGAGCTGGTGGAAGC ACACGAGTAGCAAACGAACTGGGTGCTGGGAACCCTGAAGGAGCTCGTTCAGCTGTCTAT GTTGTGCTGTCAGTTGCAGTGACAGAGGCACTTATAGTATGTGGAACTCTGTTAGCATCA CGGCGACTCCTGGGTCGTGCATACAGCAGTGAGGAGGAGGTCATCTCTTTCGTCGCGATG ATGGTTCCATTGGTTTGCATCACTGTGGTTACTGATGGTCTACAAGGAGTTATGTCAGGT ATTGCTCGAGGTTGTGGATGGCAACATTTGGGCGCGTACGTCAACCTCGGCTCATTCTAT TTGCTCGGAATTCCAATGGCGATCCTTCTTGGCTTTGTGCTACATATGGGAGCAAAAGGA CTTTGGATGGGCATTGTCTGTGGTTCAATATCACAGATCACCCTTCTATCTGCTATCACA TTTTTCACCAACTGGCAAAAGATGGCTGAAAATGCTAGGGAGAGAGTGTTCAGTGAGAAG CCAACGGAGCCCTCCAGGTATCATCTAGTGGAGTAG

Peptide Sequence

PEP ID	Os01t0684900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:28235071:28238631:-1 gene:Os01g0684900 transcript:Os01t0684900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os01t0684900-01)
Sequence	MAAAAREEQPLLLRREEGEEEGEEVGWRRRWGSEAGKLAYLALPMVAVSLTNYAVQVFSN MMVGHLPGVLPLSSAAIATSLASVTGFSLLIGMASALETLCGQAYGAKQYHTLGVHTYRA ILTLLVVCIPLSLLWVFMGKILVLIGQDPLISHGAGRYIVWLIPGLFANALIQPITKFLQ SQSLIMPMLVASVATLVFHIPLCWLMVFKTGLGYTGAALSISISYWLNVAMLVAYILLSS SCKETRTPPTIEAFKGLDGFLRLALPSALMICLEWWSFELLILMSGLLPNPELQTSVLSI CLTSITLLFTIPYGLGAGGSTRVANELGAGNPEGARSAVYVVLSVAVTEALIVCGTLLAS RRLLGRAYSSEEEVISFVAMMVPLVCITVVTDGLQGVMSGIARGCGWQHLGAYVNLGSFY LLGIPMAILLGFVLHMGAKGLWMGIVCGSISQITLLSAITFFTNWQKMAENARERVFSEK PTEPSRYHLVE

Transcript Sequence

Transcript ID	Os01t0684900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:28235071:28238631:-1 gene:Os01g0684900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os01t0684900-01)
Sequence	AGCGGCCCGAGACAAACACTCGCCCCGATAACTGGAGGCCGCGCGCGCGCGCACGGCCGC ACACCCCCCTCCTCCCTCCACTGCTCCGCCCCCGCGCACGCAACAACGGCGACACCGCCG CCAAGGCCCACGCGAGCACGCGCCGCCGCACGCGGCCGGAGAGGGAGAGGAAGCGATGGC CGCGGCCGCGAGGGAGGAGCAGCCGCTGCTGCTGCGGCGGGAGGAGGGGGAGGAGGAGGG TGAGGAGGTTGGGTGGAGGAGGAGGTGGGGGAGCGAGGCCGGGAAGCTGGCGTACCTGGC GCTGCCGATGGTGGCGGTGAGCCTGACGAACTACGCGGTGCAGGTGTTCTCCAACATGAT GGTCGGCCACCTCCCCGGCGTCCTCCCGCTCTCCTCCGCCGCCATCGCCACCTCCCTCGC CTCCGTCACCGGCTTCAGCCTCCTCATTGGAATGGCAAGTGCACTGGAAACTCTCTGTGG CCAAGCTTATGGGGCAAAACAATACCATACTCTGGGAGTGCACACCTACAGAGCCATACT CACTCTTCTGGTGGTGTGCATTCCTCTATCACTTCTATGGGTTTTCATGGGCAAAATCCT GGTACTCATTGGTCAAGATCCTTTGATCTCGCATGGAGCTGGGAGATACATCGTCTGGCT GATTCCAGGGCTTTTCGCAAACGCGTTGATTCAGCCTATCACGAAGTTCCTTCAGTCCCA GAGCTTGATAATGCCCATGCTCGTTGCATCCGTTGCAACCCTGGTGTTCCACATCCCTCT GTGCTGGTTGATGGTGTTTAAGACCGGCTTGGGGTATACTGGAGCTGCCTTGTCGATAAG CATATCATACTGGTTGAATGTGGCCATGCTTGTGGCTTATATCTTGCTGTCAAGCTCTTG CAAGGAAACACGCACACCTCCAACAATCGAGGCCTTCAAGGGATTGGATGGGTTCTTACG TCTAGCATTGCCATCTGCGCTTATGATTTGTCTTGAGTGGTGGTCATTTGAGCTACTTAT TCTTATGTCAGGACTTTTACCCAACCCCGAGCTACAAACCTCAGTGCTTTCAATTTGTCT CACAAGTATAACTTTACTTTTTACCATTCCTTATGGGCTTGGAGCTGGTGGAAGCACACG AGTAGCAAACGAACTGGGTGCTGGGAACCCTGAAGGAGCTCGTTCAGCTGTCTATGTTGT GCTGTCAGTTGCAGTGACAGAGGCACTTATAGTATGTGGAACTCTGTTAGCATCACGGCG ACTCCTGGGTCGTGCATACAGCAGTGAGGAGGAGGTCATCTCTTTCGTCGCGATGATGGT TCCATTGGTTTGCATCACTGTGGTTACTGATGGTCTACAAGGAGTTATGTCAGGTATTGC TCGAGGTTGTGGATGGCAACATTTGGGCGCGTACGTCAACCTCGGCTCATTCTATTTGCT CGGAATTCCAATGGCGATCCTTCTTGGCTTTGTGCTACATATGGGAGCAAAAGGACTTTG GATGGGCATTGTCTGTGGTTCAATATCACAGATCACCCTTCTATCTGCTATCACATTTTT CACCAACTGGCAAAAGATGGCTGAAAATGCTAGGGAGAGAGTGTTCAGTGAGAAGCCAAC GGAGCCCTCCAGGTATCATCTAGTGGAGTAGTTCTACTCCAATTTTTGCTGGGGGCAGTG GGGTAAATCTCATCCCTCGGACGGTTGGACTTGCTCGCGAGAGTGACCATGCAGAGAAGG CATCAATAAACCACCCTTTTTTGTGTGTTTCATCACAGCACGAAATGAGCCAATCTTTCC TGAATTGGTTCATTTTTCACGTGTAGTTTTGCCCACAGGATAGGCAGGGTTGACAGTCGA GGGTTGCATCCCACGGAAAACGTTTGGCTAGGAAAAAAGGGGTCCTTTTGTGGATAGTAA CAGAAATCTCAAGCTGTTTGGTTTTCTATTGTACTACCTCCTTTTTATATTTAGTTAAAG TCACCGTTGATCTGC