Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0683100-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:28137679:28143339:1 gene:Os01g0683100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:katanin P60, Katanin catalytic subunit P60 description:Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3) (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1). (Os01t0683100-01);Similar to LUE1 protein. (Os01t0683100-02)
Sequence	CCAAATCGTAGACCAACACGAGGTCAATCTAGTACAAGAAAATCCTCCCAAGATGGAGCT TGGGCCCGGGGTCCATCAAAGACTGGAACACCTAGTCGTGGTGCAAAACCTAATGGAAGT AAAGGAAACTCTGGGGCAAGATCATCCACTGCCTCTAGCACTGGTGGGAGGAAAGGGAAG TCAAGTTCAAGCAAGGCTGATTCAGTGAGTAGCGATGCTGAAGAAGGCAAGTCCAAGAAG GGGCAATATGAAGGACCAGATATGGACTTGGCTGCCATGCTTGAAAGGGATGTCCTGGAT TCTACCCCAGGTGTTAGATGGGATGATGTCGCAGGTCTTAGTGAGGCCAAAAGACTTCTT GAAGAAGCAGTTGTACTTCCTCTCTGGATGCCTGAATATTTCCAGGGTATTCGCCGACCT TGGAAAGGGGTTCTAATGTTTGGTCCACCTGGTACTGGAAAGACTCTTTTAGCGAAGGCA GTAGCTACAGAATGTGGCACAACATTTTTCAATGTTTCTTCAGCAACTCTGGCTTCTAAA TGGCGGGGAGAGAGTGAGCGCATGGTCCGCTGTTTATTTGATCTTGCAAGGTTCTATGCT CCAAGTACAATCTTCATTGATGAAATTGACTCCCTCTGCACATCTCGTGGAGCTTCTGGT GAGCATGAGTCATCAAGGAGGGTGAAGTCTGAACTTCTAGTTCAAATAGACGGTGTAAAT AATAGTTCTACCACTGAAGATGGTCAACCAAAAATAGTTATGGTTCTGGCAGCTACCAAC TTTCCATGGGATATTGATGAAGCACTGAGACGGAGGCTGGAGAAGCGTATTTATATTCCA CTTCCAAATTTTGAAAGCAGAAAGGCACTCATCAATATTAACCTTAAAACTGTTGAGGTT GCTACCGATGTTGACATAGATGAAGTTGCACGGAGGACAGAAGGCTATAGTGGTGACGAC CTTACAAATGTTTGCCGTGATGCTTCAATGAATGGCATGAGACGAAAGATTGCAGGCAAG ACCCGCGATGAGATTAAGAACATGTCAAAAGATGAGATCTCAAAAGACCCAGTGGCCATG TGTGACTTTGAGGAAGCTCTGGCCAAGGTTCAGAAGAGTGTATCACCCGCTGATATAGAA AAGCACGAGAAGTGGCAGGCCGAGTTTGGGTCCGCTTGA

Peptide Sequence

PEP ID	Os01t0683100-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:28137679:28143339:1 gene:Os01g0683100 transcript:Os01t0683100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:katanin P60, Katanin catalytic subunit P60 description:Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3) (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1). (Os01t0683100-01);Similar to LUE1 protein. (Os01t0683100-02)
Sequence	PNRRPTRGQSSTRKSSQDGAWARGPSKTGTPSRGAKPNGSKGNSGARSSTASSTGGRKGK SSSSKADSVSSDAEEGKSKKGQYEGPDMDLAAMLERDVLDSTPGVRWDDVAGLSEAKRLL EEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASK WRGESERMVRCLFDLARFYAPSTIFIDEIDSLCTSRGASGEHESSRRVKSELLVQIDGVN NSSTTEDGQPKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKALININLKTVEV ATDVDIDEVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDEISKDPVAM CDFEEALAKVQKSVSPADIEKHEKWQAEFGSA

Transcript Sequence

Transcript ID	Os01t0683100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:28137679:28143339:1 gene:Os01g0683100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:katanin P60, Katanin catalytic subunit P60 description:Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3) (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1). (Os01t0683100-01);Similar to LUE1 protein. (Os01t0683100-02)
Sequence	CACCAAATCGTAGACCAACACGAGGTCAATCTAGTACAAGAAAATCCTCCCAAGATGGAG CTTGGGCCCGGGGTCCATCAAAGACTGGAACACCTAGTCGTGGTGCAAAACCTAATGGAA GTAAAGGAAACTCTGGGGCAAGATCATCCACTGCCTCTAGCACTGGTGGGAGGAAAGGGA AGTCAAGTTCAAGCAAGGCTGATTCAGTGAGTAGCGATGCTGAAGAAGGCAAGTCCAAGA AGGGGCAATATGAAGGACCAGATATGGACTTGGCTGCCATGCTTGAAAGGGATGTCCTGG ATTCTACCCCAGGTGTTAGATGGGATGATGTCGCAGGTCTTAGTGAGGCCAAAAGACTTC TTGAAGAAGCAGTTGTACTTCCTCTCTGGATGCCTGAATATTTCCAGGGTATTCGCCGAC CTTGGAAAGGGGTTCTAATGTTTGGTCCACCTGGTACTGGAAAGACTCTTTTAGCGAAGG CAGTAGCTACAGAATGTGGCACAACATTTTTCAATGTTTCTTCAGCAACTCTGGCTTCTA AATGGCGGGGAGAGAGTGAGCGCATGGTCCGCTGTTTATTTGATCTTGCAAGGTTCTATG CTCCAAGTACAATCTTCATTGATGAAATTGACTCCCTCTGCACATCTCGTGGAGCTTCTG GTGAGCATGAGTCATCAAGGAGGGTGAAGTCTGAACTTCTAGTTCAAATAGACGGTGTAA ATAATAGTTCTACCACTGAAGATGGTCAACCAAAAATAGTTATGGTTCTGGCAGCTACCA ACTTTCCATGGGATATTGATGAAGCACTGAGACGGAGGCTGGAGAAGCGTATTTATATTC CACTTCCAAATTTTGAAAGCAGAAAGGCACTCATCAATATTAACCTTAAAACTGTTGAGG TTGCTACCGATGTTGACATAGATGAAGTTGCACGGAGGACAGAAGGCTATAGTGGTGACG ACCTTACAAATGTTTGCCGTGATGCTTCAATGAATGGCATGAGACGAAAGATTGCAGGCA AGACCCGCGATGAGATTAAGAACATGTCAAAAGATGAGATCTCAAAAGACCCAGTGGCCA TGTGTGACTTTGAGGAAGCTCTGGCCAAGGTTCAGAAGAGTGTATCACCCGCTGATATAG AAAAGCACGAGAAGTGGCAGGCCGAGTTTGGGTCCGCTTGAAATCTCCATTCTGTTCCCG TTCAAATTTCTCAGATCATTGTTTCTCCTTGGTTGCTTGTGTTCGCAAGTATTTCATTCA TTTGTACCGCTGTTATGTTGTTTCAACGGCCTTATGTTGATCGGTTGTATTGCCTGCGCC GGTGTTGTATCATAGAGACAAACCAGACAGTAAACTAGGAAGTGAGAGGTCTCTGCCCGT GGAACTGCTTTGTTGATTTAGTTTCAGTGTCACTGGCACTGCCGAAGCCAAAGGTTGCGT CACTCTGTAACCATTTCGAACAGTTGATATCCAGCTTCCATGTTTCGCACGGGCAGTTGC GACGTGCGCGTTTT