Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0682500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:28126575:28130263:1 gene:Os01g0682500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein Kinase C630.09c. (Os01t0682500-01)
Sequence	ATGACGCCGCTCCACGCCGCCCCGCACCATGCCGCGGCCGCGGCCGCGGTCGTCTCCTCG CCCTCATCCGCGCCGCTCCTCCTCCGCGCCAAGCCTTACCACCCCAAGGCGGCGGCTTGC TCCTTCACCGTGACCGCCACCACTCCGTCGAGGAAAGCTTTCCTGTCGTGCCCGGATCAC GGCCAGGCGGCGGCGGGGGCGGCGCCGCCGCGCTCCGCCCCGGCGTCGTCGCCGGCGCTC ATCTCCTCCGTCCAGGACCTGTACGACTTCATCTGCAGCGGCCCGCTCGTGGACAGGATC GGGTACACCAAGGAGAAGATCGCCGGCTCCATCGACCGGTGGCTGCGCTGCGGTGTGCAG GTGGCCCGGCTGTTCCGCCTCAACGAGCTCCACCTCTCGGAGGCGGAGAAGGCCAGGATA TACCACTTCTACATCCCCGTCTTCCTCTGGTGCGAGGACCAGGTCACGGAGCACAGGGCC AAGTACAAGGACGGCGACGAGATCCCTCCATTAGTGATTGGGGTCAGCGCTCCCCAAGGC AGTGGAAAGACAACTCTTGTTTTCGCACTTGATTATCTTTTTCGGGTTGCTGGTAGGAAT GCCGCTACATTATCTATCGATGACTTCTACTTGACGGCAGCAGAACAGGGTAAATTGAGG GAAAGAAATCCTGGAAATGCTCTTTTGGAGCTTCGTGGAAATGCTGGAAGCCATGATCTC CCGTTCTCAGTTGAAACACTTGAATCGCTGCTTAAACTAACTAAAGAAGGTTTGAAGATG AAGCTTCCACGGTATGACAAGTCTGCTTTTGGTGGAAGAGGTGATCGGGCTGATCCTTCA ACATGGCCAGAGGTTGAAGGGCCCTTAGAGGTTGTTCTTTTTGAAGGATGGATGCTTGGA TTCAAACCTCTTCCAAATGAAGTTGTAAAAGCAGTGGACCCTCAGCTTGAGGTGGTTAAT AAGAACCTTGAGGCATACTACGATGCATGGGACAGGTTCATTGGGTCATGGATGGTCATA AAAATAAAGGAACCTAGTTGCGTGTACCAGTGGAGACTGCAGGCAGAGATAGCTATGAGA GCAGATGGGAAACCAGGAATGTCTGATGAGGAGGTCATGGATTTTGTGTCGCGCTACCTA CCAGCATACCACGCATATTTGCCCACTCTATATAAAGAGGGACCAAACGGCTCGAACCCA GACCACCTGCTGGTCGTTGACATAGACGAAAAGAGGAATCCTATGTGGGGTAGATGA

Peptide Sequence

PEP ID	Os01t0682500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:28126575:28130263:1 gene:Os01g0682500 transcript:Os01t0682500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein Kinase C630.09c. (Os01t0682500-01)
Sequence	MTPLHAAPHHAAAAAAVVSSPSSAPLLLRAKPYHPKAAACSFTVTATTPSRKAFLSCPDH GQAAAGAAPPRSAPASSPALISSVQDLYDFICSGPLVDRIGYTKEKIAGSIDRWLRCGVQ VARLFRLNELHLSEAEKARIYHFYIPVFLWCEDQVTEHRAKYKDGDEIPPLVIGVSAPQG SGKTTLVFALDYLFRVAGRNAATLSIDDFYLTAAEQGKLRERNPGNALLELRGNAGSHDL PFSVETLESLLKLTKEGLKMKLPRYDKSAFGGRGDRADPSTWPEVEGPLEVVLFEGWMLG FKPLPNEVVKAVDPQLEVVNKNLEAYYDAWDRFIGSWMVIKIKEPSCVYQWRLQAEIAMR ADGKPGMSDEEVMDFVSRYLPAYHAYLPTLYKEGPNGSNPDHLLVVDIDEKRNPMWGR

Transcript Sequence

Transcript ID	Os01t0682500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:28126575:28130263:1 gene:Os01g0682500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein Kinase C630.09c. (Os01t0682500-01)
Sequence	ACGTCCTCCTCCTCCCCAGCAGTCCCACCCGCGCACGCACGTCGATCCGGGAGAGAGAGA GAGAGCGCGATGACGCCGCTCCACGCCGCCCCGCACCATGCCGCGGCCGCGGCCGCGGTC GTCTCCTCGCCCTCATCCGCGCCGCTCCTCCTCCGCGCCAAGCCTTACCACCCCAAGGCG GCGGCTTGCTCCTTCACCGTGACCGCCACCACTCCGTCGAGGAAAGCTTTCCTGTCGTGC CCGGATCACGGCCAGGCGGCGGCGGGGGCGGCGCCGCCGCGCTCCGCCCCGGCGTCGTCG CCGGCGCTCATCTCCTCCGTCCAGGACCTGTACGACTTCATCTGCAGCGGCCCGCTCGTG GACAGGATCGGGTACACCAAGGAGAAGATCGCCGGCTCCATCGACCGGTGGCTGCGCTGC GGTGTGCAGGTGGCCCGGCTGTTCCGCCTCAACGAGCTCCACCTCTCGGAGGCGGAGAAG GCCAGGATATACCACTTCTACATCCCCGTCTTCCTCTGGTGCGAGGACCAGGTCACGGAG CACAGGGCCAAGTACAAGGACGGCGACGAGATCCCTCCATTAGTGATTGGGGTCAGCGCT CCCCAAGGCAGTGGAAAGACAACTCTTGTTTTCGCACTTGATTATCTTTTTCGGGTTGCT GGTAGGAATGCCGCTACATTATCTATCGATGACTTCTACTTGACGGCAGCAGAACAGGGT AAATTGAGGGAAAGAAATCCTGGAAATGCTCTTTTGGAGCTTCGTGGAAATGCTGGAAGC CATGATCTCCCGTTCTCAGTTGAAACACTTGAATCGCTGCTTAAACTAACTAAAGAAGGT TTGAAGATGAAGCTTCCACGGTATGACAAGTCTGCTTTTGGTGGAAGAGGTGATCGGGCT GATCCTTCAACATGGCCAGAGGTTGAAGGGCCCTTAGAGGTTGTTCTTTTTGAAGGATGG ATGCTTGGATTCAAACCTCTTCCAAATGAAGTTGTAAAAGCAGTGGACCCTCAGCTTGAG GTGGTTAATAAGAACCTTGAGGCATACTACGATGCATGGGACAGGTTCATTGGGTCATGG ATGGTCATAAAAATAAAGGAACCTAGTTGCGTGTACCAGTGGAGACTGCAGGCAGAGATA GCTATGAGAGCAGATGGGAAACCAGGAATGTCTGATGAGGAGGTCATGGATTTTGTGTCG CGCTACCTACCAGCATACCACGCATATTTGCCCACTCTATATAAAGAGGGACCAAACGGC TCGAACCCAGACCACCTGCTGGTCGTTGACATAGACGAAAAGAGGAATCCTATGTGGGGT AGATGAGCCCTGAATGTACATTGCTGAAAGAAAATGGATCTTCTGACCCAATGGTGGAGT TTGGGATATCTGATCTTTCTGAGACCACATATTCCAAGCAAGCACCACTGGCCTCTTGTT TCTTGTGGCTTGAACAAGTACTAAACGTGTAAAACTTTGATGTATACGAAATCTTGCTAT TACTTATAAGGAAATCGGAATCCCAATTC