Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0681600-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:28080407:28083298:1 gene:Os01g0681600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0681600-01);Similar to Splicing factor 3A subunit 3 (Spliceosome associated protein 61) (SAP 61) (SF3a60). (Os01t0681600-02)
Sequence	ATGGCCGAGGCCAACCAGTACCAGATCCTGGTGCGGCTCCTCGACGGCCGCACACGCTGC CTCCGCTTCTCGACGACGACCGTCTCCGGCGCGGCGCTCCTCGACGCCGTCTCGGCGCTC TCCCGCGTCCCCGCCGCGTCCCTCCGCCTCGTCACCGGCCGCCTCGACGTCTCGCCGTCC TCCGTCCTCGCCTCCTCCGCCGACGGCCGATTCCCCTCCGCATCCGCGCTCCTTCGCCTC CGCGGAGGCAAGGGCGGGTTTGGCTCGCTCCTCCGTGGCGCCGCCTCCAAGGCCGGCCAG AAGAAGACCAGCAACTTCGACGCCTGCCGCGATATCAACGGCCGCCGCCTGCGCCACGTT AACGCCGAGCGCCGCCTCGAGGAGTGGAAGGCCGAGGCCGCAGATCGCCAGCTCGAGAAG CTCGCGGAGGATTTCATCAAGAAGAAGGCTAAGGAAGCGGGTCGCGGTGGTGTGAAGGCG GCCGAGGTGGACAAATACCTCGAGAAGTACCGCAAGGATGCCGAGAGTTGCGTTAATGCG GTTGAGGAGTCTGTGCGCGCCTCTCTTGGGAAGAGGAAGACCGTGCCCAAGCCACGCGGT GGGGAAGATGCCAAGAAGCTTAAGATTTGGCTGGGCAAGAAGAAGGTACAAGAGGATGAG AGTGATAGCGATAGTGACAGTGAAATGGATGATGATGAGGGTGCAGATACAAAATCCATA ATTCTTGATGATGGGAATTCCTCGCATGGATCCAAAAGTGAGGACGAGAAGGTTGATCTG GGTTCAATTACTGAATCACCTTCAGAAGGAGAGACCTCAGGTGAGAAGTCTGGACGCTCT GAATCAGAGGAGAATGGAAACGGTGTTCAGGAGTCCAGGGAACCTACAATTAGGTCAGAA GGTGAATGCGGTGATTTTATATCAGATGGTGTGGTGGAGCATGAGATTGGAGTGGTGGAT GAGCACACACCTGAGAATGGTGTTAGTGCTCTTTCAGAAGAAGTGTTGAAACCAGATGTA AAAGCAGAGGATAACACTGCTTCTGCTTCAGCCACATCACATCTTAATGACCTAGAGGCG CCTCCAGTAGAAGAACCTGCCAATGGAAATATATCTCCTCTTTCACAGGAACCACTGGAC CTGACAATTTACAGTTCAGCTGCAGAATTGGAGGTACTTGGCATGGAGAGACTCAAGCTA GAGTTGCAGAATCGTGGACTAAAATGTGGTGGCACCTTACAAGAGCGTGCTGCCAGGCTT TTCCTTCTGAAAACAACACCTCTGGAGAAGCTACCAAAGAAGCTGTTCGCAAAGCCCAGT GGTGGGGGAAAGTGA

Peptide Sequence

PEP ID	Os01t0681600-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:28080407:28083298:1 gene:Os01g0681600 transcript:Os01t0681600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0681600-01);Similar to Splicing factor 3A subunit 3 (Spliceosome associated protein 61) (SAP 61) (SF3a60). (Os01t0681600-02)
Sequence	MAEANQYQILVRLLDGRTRCLRFSTTTVSGAALLDAVSALSRVPAASLRLVTGRLDVSPS SVLASSADGRFPSASALLRLRGGKGGFGSLLRGAASKAGQKKTSNFDACRDINGRRLRHV NAERRLEEWKAEAADRQLEKLAEDFIKKKAKEAGRGGVKAAEVDKYLEKYRKDAESCVNA VEESVRASLGKRKTVPKPRGGEDAKKLKIWLGKKKVQEDESDSDSDSEMDDDEGADTKSI ILDDGNSSHGSKSEDEKVDLGSITESPSEGETSGEKSGRSESEENGNGVQESREPTIRSE GECGDFISDGVVEHEIGVVDEHTPENGVSALSEEVLKPDVKAEDNTASASATSHLNDLEA PPVEEPANGNISPLSQEPLDLTIYSSAAELEVLGMERLKLELQNRGLKCGGTLQERAARL FLLKTTPLEKLPKKLFAKPSGGGK

Transcript Sequence

Transcript ID	Os01t0681600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:28080407:28083298:1 gene:Os01g0681600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0681600-01);Similar to Splicing factor 3A subunit 3 (Spliceosome associated protein 61) (SAP 61) (SF3a60). (Os01t0681600-02)
Sequence	GGGAAAGTTTGACCCCCTCTTTTCTCTCCGATTCTGCGAGGCGACATCGGCGGCGAGAGG CGGGCTAGGGTTTCGAGCACCGCCACCGCGCGCCATGGCCGAGGCCAACCAGTACCAGAT CCTGGTGCGGCTCCTCGACGGCCGCACACGCTGCCTCCGCTTCTCGACGACGACCGTCTC CGGCGCGGCGCTCCTCGACGCCGTCTCGGCGCTCTCCCGCGTCCCCGCCGCGTCCCTCCG CCTCGTCACCGGCCGCCTCGACGTCTCGCCGTCCTCCGTCCTCGCCTCCTCCGCCGACGG CCGATTCCCCTCCGCATCCGCGCTCCTTCGCCTCCGCGGAGGCAAGGGCGGGTTTGGCTC GCTCCTCCGTGGCGCCGCCTCCAAGGCCGGCCAGAAGAAGACCAGCAACTTCGACGCCTG CCGCGATATCAACGGCCGCCGCCTGCGCCACGTTAACGCCGAGCGCCGCCTCGAGGAGTG GAAGGCCGAGGCCGCAGATCGCCAGCTCGAGAAGCTCGCGGAGGATTTCATCAAGAAGAA GGCTAAGGAAGCGGGTCGCGGTGGTGTGAAGGCGGCCGAGGTGGACAAATACCTCGAGAA GTACCGCAAGGATGCCGAGAGTTGCGTTAATGCGGTTGAGGAGTCTGTGCGCGCCTCTCT TGGGAAGAGGAAGACCGTGCCCAAGCCACGCGGTGGGGAAGATGCCAAGAAGCTTAAGAT TTGGCTGGGCAAGAAGAAGGTACAAGAGGATGAGAGTGATAGCGATAGTGACAGTGAAAT GGATGATGATGAGGGTGCAGATACAAAATCCATAATTCTTGATGATGGGAATTCCTCGCA TGGATCCAAAAGTGAGGACGAGAAGGTTGATCTGGGTTCAATTACTGAATCACCTTCAGA AGGAGAGACCTCAGGTGAGAAGTCTGGACGCTCTGAATCAGAGGAGAATGGAAACGGTGT TCAGGAGTCCAGGGAACCTACAATTAGGTCAGAAGGTGAATGCGGTGATTTTATATCAGA TGGTGTGGTGGAGCATGAGATTGGAGTGGTGGATGAGCACACACCTGAGAATGGTGTTAG TGCTCTTTCAGAAGAAGTGTTGAAACCAGATGTAAAAGCAGAGGATAACACTGCTTCTGC TTCAGCCACATCACATCTTAATGACCTAGAGGCGCCTCCAGTAGAAGAACCTGCCAATGG AAATATATCTCCTCTTTCACAGGAACCACTGGACCTGACAATTTACAGTTCAGCTGCAGA ATTGGAGGTACTTGGCATGGAGAGACTCAAGCTAGAGTTGCAGAATCGTGGACTAAAATG TGGTGGCACCTTACAAGAGCGTGCTGCCAGGCTTTTCCTTCTGAAAACAACACCTCTGGA GAAGCTACCAAAGAAGCTGTTCGCAAAGCCCAGTGGTGGGGGAAAGTGAGAACTAGTGCA TATAACAGCTAAAATGACGAAATGCAAATCTATATGTGATGTTCTTTTATAATTTGAAAT TGTTGTAATGTGATGATAAACTTTTGTCTTGACGCTGAAAATTAATGAGCTATGACGTGC CAGTATGCACATGTTGTAATGTCT