Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0681400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:28070715:28076428:-1 gene:Os01g0681400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 6A description:ATG6/Beclin-1 protein, Abiotic stresses (heat,cold and drought) and hormone (abscisic acid) response (Os01t0681400-01)
Sequence	ATGAAGGCCCCCGCCGCGGCCGCGGCCGCGGTCGGCAACAGGGCTGGTGGGGTGGATCCG TCGATTCCGCGGTTCAAGTGCCAGGAGTGCCACCGCGCGCTCGTCGTCGTCGGCGTGGAT TCCTTCGCCGATAAGCTCCCGGCTCAGGCCACCTCTGCGCATGCATCCTCTGTTCATGGA AGTATTATGGGAGCTAGCAGGATGGATAATTCTTATGTCGTGCTATCCAAGCAAAACAAA TCTCATGGCCATGGAATTCCCCCACGCCCACCAAGTGCAGCAGCCCCACATATCGAACCT AACCAGCCAACAAGAGCGATGGAGGGTTCATATATAGTGCTTCCACCTGCTGCTGCTTCC ATATACAAGACATCTACTTCTGAAGGAGGTGGTGCGCAGTTGCCACCACCAAGTATCAAT TCCAGTAGTTTGTTACCAGGAAATAGTTTTCACTCTAACGTGACTGTATTAAAACGGGCA TTTGAGATTGCTACGTCACAAACTCAGGTTGAGCAGCCAATGTGTCTGGACTGTATGAGG TTGCTCTCTGATAAGATGGATAAGGAGATTGAAGATGTTAATGCTGACATTAAAGCTTAT GAAGTCTGTCTTCAACATTTGGAGCAGGAATCCCACACTGTCCTCAGCGATGCTGGTTTT CAGAAGGAGAAACTGAAGATTGAAGAAGAAGAAAAGAAGCTTAACGCCGCTATTGAAGAA GCTGAAAAGCAATATTCAGAAATTAGTTCTGAGATGAAGGATCTTGAAATAAAATCTAAA GAATTTGAAGAATTGGAAGAAAGGTATTGGCATGAATTCAATAGCTTTCAGTTTCAGTTG ACATCTCACCAGGAAGAAAGAGATGCAATTTTGGCCAAAATAGAAGTTTCACAGGTTCAT TTGGAATTGCTGAAGCAAACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGA GTAATTGGAACAATAAACAACTTCCGACTCGGACGCCTTCCTAATGTACAGGTTGAATGG GATGAGATAAATGCTGCTTGGGGTCAGGCTGCTCTTCTTTTGCATACCATGGCTCAGTAC TTCACCCCAAAATTTGAGTACCGGATTAAGATTCACCCTATGGGTAGCTACCCAAGAGTC ACAGATATCCACAAAAATACATATGAACTGTTTGGTCCCGTGAATTTATTCTGGAGCACA CGTTTTGACAAAGCCATGACATGGTTTCTAACCTGCCTGCAAGATTTTGCTGAGTTCGCT ATTAGCTTGGATAAAGAGAACAATGTACCACCTGAGAAGTCATTAAAGCTCCCATACAAG ATTGATGGTGACAAGGTAGGGAGCCACACAATCTTCTTAAGTTTTAATAAAGTGGAGAAC TGGACGAAAGCACTAAAATACACGCTGTGCAACTTGAAGTGGGTCCTCTACTGGTTTATC GGCAATACGAGTTTCGCACCACCATCTGGATCTTTGTGTGCAGCGCAATCATCTAAGAGA TGA

Peptide Sequence

PEP ID	Os01t0681400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:28070715:28076428:-1 gene:Os01g0681400 transcript:Os01t0681400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 6A description:ATG6/Beclin-1 protein, Abiotic stresses (heat,cold and drought) and hormone (abscisic acid) response (Os01t0681400-01)
Sequence	MKAPAAAAAAVGNRAGGVDPSIPRFKCQECHRALVVVGVDSFADKLPAQATSAHASSVHG SIMGASRMDNSYVVLSKQNKSHGHGIPPRPPSAAAPHIEPNQPTRAMEGSYIVLPPAAAS IYKTSTSEGGGAQLPPPSINSSSLLPGNSFHSNVTVLKRAFEIATSQTQVEQPMCLDCMR LLSDKMDKEIEDVNADIKAYEVCLQHLEQESHTVLSDAGFQKEKLKIEEEEKKLNAAIEE AEKQYSEISSEMKDLEIKSKEFEELEERYWHEFNSFQFQLTSHQEERDAILAKIEVSQVH LELLKQTNVLNDAFYISHDGVIGTINNFRLGRLPNVQVEWDEINAAWGQAALLLHTMAQY FTPKFEYRIKIHPMGSYPRVTDIHKNTYELFGPVNLFWSTRFDKAMTWFLTCLQDFAEFA ISLDKENNVPPEKSLKLPYKIDGDKVGSHTIFLSFNKVENWTKALKYTLCNLKWVLYWFI GNTSFAPPSGSLCAAQSSKR

Transcript Sequence

Transcript ID	Os01t0681400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:28070715:28076428:-1 gene:Os01g0681400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 6A description:ATG6/Beclin-1 protein, Abiotic stresses (heat,cold and drought) and hormone (abscisic acid) response (Os01t0681400-01)
Sequence	AGTATTATGTTATTATCCCTGACAGGTGGGCTCCACGTGTCAGCGACTGTTTGCTCGTTG CTGTTTGCTCCCGCGACGACGAATCCGTGCCGACCTCGCTTCCCCGCCGGCCGCCATGAA ATTGGAGCTTCCGAGAGGAGAAAATCTCGAGAAGTAGAGAGAGAAAACCACAGCGTGAGC GAGCGTGGGCGTCCTTGATTCCGGCGACATGAAGGCCCCCGCCGCGGCCGCGGCCGCGGT CGGCAACAGGGCTGGTGGGGTGGATCCGTCGATTCCGCGGTTCAAGTGCCAGGAGTGCCA CCGCGCGCTCGTCGTCGTCGGCGTGGATTCCTTCGCCGATAAGCTCCCGGCTCAGGCCAC CTCTGCGCATGCATCCTCTGTTCATGGAAGTATTATGGGAGCTAGCAGGATGGATAATTC TTATGTCGTGCTATCCAAGCAAAACAAATCTCATGGCCATGGAATTCCCCCACGCCCACC AAGTGCAGCAGCCCCACATATCGAACCTAACCAGCCAACAAGAGCGATGGAGGGTTCATA TATAGTGCTTCCACCTGCTGCTGCTTCCATATACAAGACATCTACTTCTGAAGGAGGTGG TGCGCAGTTGCCACCACCAAGTATCAATTCCAGTAGTTTGTTACCAGGAAATAGTTTTCA CTCTAACGTGACTGTATTAAAACGGGCATTTGAGATTGCTACGTCACAAACTCAGGTTGA GCAGCCAATGTGTCTGGACTGTATGAGGTTGCTCTCTGATAAGATGGATAAGGAGATTGA AGATGTTAATGCTGACATTAAAGCTTATGAAGTCTGTCTTCAACATTTGGAGCAGGAATC CCACACTGTCCTCAGCGATGCTGGTTTTCAGAAGGAGAAACTGAAGATTGAAGAAGAAGA AAAGAAGCTTAACGCCGCTATTGAAGAAGCTGAAAAGCAATATTCAGAAATTAGTTCTGA GATGAAGGATCTTGAAATAAAATCTAAAGAATTTGAAGAATTGGAAGAAAGGTATTGGCA TGAATTCAATAGCTTTCAGTTTCAGTTGACATCTCACCAGGAAGAAAGAGATGCAATTTT GGCCAAAATAGAAGTTTCACAGGTTCATTTGGAATTGCTGAAGCAAACAAATGTTCTCAA TGATGCATTCTATATTTCACATGATGGAGTAATTGGAACAATAAACAACTTCCGACTCGG ACGCCTTCCTAATGTACAGGTTGAATGGGATGAGATAAATGCTGCTTGGGGTCAGGCTGC TCTTCTTTTGCATACCATGGCTCAGTACTTCACCCCAAAATTTGAGTACCGGATTAAGAT TCACCCTATGGGTAGCTACCCAAGAGTCACAGATATCCACAAAAATACATATGAACTGTT TGGTCCCGTGAATTTATTCTGGAGCACACGTTTTGACAAAGCCATGACATGGTTTCTAAC CTGCCTGCAAGATTTTGCTGAGTTCGCTATTAGCTTGGATAAAGAGAACAATGTACCACC TGAGAAGTCATTAAAGCTCCCATACAAGATTGATGGTGACAAGGTAGGGAGCCACACAAT CTTCTTAAGTTTTAATAAAGTGGAGAACTGGACGAAAGCACTAAAATACACGCTGTGCAA CTTGAAGTGGGTCCTCTACTGGTTTATCGGCAATACGAGTTTCGCACCACCATCTGGATC TTTGTGTGCAGCGCAATCATCTAAGAGATGATGATGTCACTGACCTATTAAGGTGGTGTT TGGATCCAGGGACTTAACTTTAGTCCCTATATTTAGACACTAATTTAGAGTATTAGATAT AGACTACTTACAAAACTAATTACATAAATGAAAGCTAATTCGCGAGACAAATTTTTAAGC CTAATTAATCCATAATTAGAGAATGTTTACTGTAGCATCACATAGGCTAATTATGGATTA ATTAGACTCAATAGATTCGTCTCGCGAATTAGTCTAAGATTATGAATGGGTTTTATTAAT AGTCTACGTTTAATATTTGTAATTAGTGTCCAAACATCCAATGTGATAAGGACTTGAAAG TTTTAGTCCCATCTAAACATGGTCTAAACTGATTGTAGCCGCACATTGAACAGATAGTAG CATTGACGTGACATATTC