Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0681200-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:28061809:28067060:-1 gene:Os01g0681200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-01);Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-02)
Sequence	ATGGCGGCCTCGACGATGAAGCACCTCGTGCAGGTCGGGGAGGCGCGGGAGGCGGCGGAG GAGGACGGAGGGGCGCCCTCGGCCGGGCCGGCGTACCGCTGCGCCTACGGCGGGGGCGCC GCCTCGCCGCCCGCCGTGCCGGGGCTCGAGTGCTGCTGGGACATATTCCGGATGACGGTG GAGAGGTGCCCGGACAACAAGATGTTGGGCCGCCGAGAAATCGTCGACGGCAAGGCTGGC AAGTACACGTGGATAACTTACAAGGAAGCGTACGACACCGTGATCAAGGTGGGCGCGTCC ATCCGGAGCCTTGGAGTCGGCAAGGGTGGACGCTGTGGTATTTACGGAGCCAACTGCCCT GAGTGGGTTATCAGTATGCAGGCCTGCAATGCCCATGGCATATACTGTGTTCCGTTGTAT GACACGCTAGGTGCTGGGGCTGTAGAATTTATACTGTGCCATGCTGAGGTAGAAATTGCT TTTATAGAGGAAAAGAAGATAGGAGAGGTGCTCAAGACATTTCCAAATGCAACAAAGTAT TTGAAGACAATTGTGAGCTTTGGAAAGGTCAATCCTGAACAAAAGGAAAAGGTTGAACAA AACGGAGTGTCCATCTACTCGTGGGAAGAGTTTTTGCAGTTGGGAGGTGAAGAAAAGTAT GAACTTCCTACAAAGCAAAAGGATGATATCTGTACAATAATGTACACCAGTGGAACAACT GGTGACCCTAAGGGAGTTTTAATCTCCAACAGGAGCATTATTACTATTATTTCAGCAGTA GATGGGTTCCTTGCAAACTCAAAAGAGCAGCTTCGTGAAGATGATGTTTACATTTCTTAT CTTCCTCTTGCCCATATCTTTGACCGTGTACTTGAGGAAGTGTTCATTCACCATGGTGCA TCAATTGGATTTTGGCGTGGAGATGTCAAACTCTTGGTTGAAGACATTGGAGAACTCAAG CCAACAATTTTCTGCGCTGTTCCACGTGTACTAGACAGAATTTATGGAGGACTGCAAGAT AAAGTTTCGACTGGTGGTTTCCTGAAGAAGACACTGTTTAATGTTGCTTACAAATACAAA CAAGGGAATATGGTGAAAGGAAGCAAGCATGAAGAAGCTGCTGCCATGTTCGATAAACTA GTCTTCACCAAGGTTAAACGAGGATTAGGTGGCAGAGTACGACTTATTTTGTCTGGTGCA GCTCCCCTGTCTAATCATGTTGAAGAGTACCTGCGTGTGGTAACTTGCTCCCTTGTTCTT CAGGGCTATGGTCTTACTGAGACCTGTGCTGGGTCCTTCGTTTCCCTTCCAAACAACATG TCGATGCTGGGAACTGTAGGCCCTCCAGTCCCCTATGTCGAAGTACACCTCGAGTCTGTT CCTGAAATGGGATATGATGCATTGTCAAAAGAATCACCTCGTGGGGAGATTTGCATCAGA GGGGACACCTTGTTCTCAGGGTACCACAAACGAGAAGACCTCACCAAGGAAGTTTTAGTC GATGGATGGTTTCACACAGGAGACATTGGTGAGTGGCAGTCTGATGGAAGCATGAAGATC ATTGATCGCAAGAAGAACATCTTCAAGCTCTCCCAAGGAGAATATGTCGCTGTGGAGAAT TTGGAGAACATATTCGGTCAAGCTCCTGGTGTTGATTCGATTTGGGTGTACGGGAATAGC TTCGAATCATGCTTGGTTGCAGTGGTCAACCCGAACAAGCAAGCTCTGGAACGATGGGCA GAGTCAAACGGGGTAACTGGAGACTTTGCTACCATGTGTGAAGATCCTAAAGCAAAAGAA TTTATCTTGGGAGAATTAACCAAGACTGGTAAAGAAAAGAAGCTCAAAGGCTTTGAGCTC ATCAGGGCTGTTCATCTGGAGCCAGTGCCATTCGATATGGATCGTGACCTAATTACCCCA ACTTACAAGAAGAAGCGGCCACAGCTGCTCAAATATTACCAGAACGTCATCGACAGCATG TATAAGAACATGAAGTAG

Peptide Sequence

PEP ID	Os01t0681200-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:28061809:28067060:-1 gene:Os01g0681200 transcript:Os01t0681200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-01);Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-02)
Sequence	MAASTMKHLVQVGEAREAAEEDGGAPSAGPAYRCAYGGGAASPPAVPGLECCWDIFRMTV ERCPDNKMLGRREIVDGKAGKYTWITYKEAYDTVIKVGASIRSLGVGKGGRCGIYGANCP EWVISMQACNAHGIYCVPLYDTLGAGAVEFILCHAEVEIAFIEEKKIGEVLKTFPNATKY LKTIVSFGKVNPEQKEKVEQNGVSIYSWEEFLQLGGEEKYELPTKQKDDICTIMYTSGTT GDPKGVLISNRSIITIISAVDGFLANSKEQLREDDVYISYLPLAHIFDRVLEEVFIHHGA SIGFWRGDVKLLVEDIGELKPTIFCAVPRVLDRIYGGLQDKVSTGGFLKKTLFNVAYKYK QGNMVKGSKHEEAAAMFDKLVFTKVKRGLGGRVRLILSGAAPLSNHVEEYLRVVTCSLVL QGYGLTETCAGSFVSLPNNMSMLGTVGPPVPYVEVHLESVPEMGYDALSKESPRGEICIR GDTLFSGYHKREDLTKEVLVDGWFHTGDIGEWQSDGSMKIIDRKKNIFKLSQGEYVAVEN LENIFGQAPGVDSIWVYGNSFESCLVAVVNPNKQALERWAESNGVTGDFATMCEDPKAKE FILGELTKTGKEKKLKGFELIRAVHLEPVPFDMDRDLITPTYKKKRPQLLKYYQNVIDSM YKNMK

Transcript Sequence

Transcript ID	Os01t0681200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:28061809:28067060:-1 gene:Os01g0681200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-01);Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-02)
Sequence	ATCTGCTTCTTCTTCTTCTTCCTCTGCTGCTGCCGCGTTGCGTACGGTCGTGGGAGGAAA CAGGGAGAGGGAGATGGCGGCCTCGACGATGAAGCACCTCGTGCAGGTCGGGGAGGCGCG GGAGGCGGCGGAGGAGGACGGAGGGGCGCCCTCGGCCGGGCCGGCGTACCGCTGCGCCTA CGGCGGGGGCGCCGCCTCGCCGCCCGCCGTGCCGGGGCTCGAGTGCTGCTGGGACATATT CCGGATGACGGTGGAGAGGTGCCCGGACAACAAGATGTTGGGCCGCCGAGAAATCGTCGA CGGCAAGGCTGGCAAGTACACGTGGATAACTTACAAGGAAGCGTACGACACCGTGATCAA GGTGGGCGCGTCCATCCGGAGCCTTGGAGTCGGCAAGGGTGGACGCTGTGGTATTTACGG AGCCAACTGCCCTGAGTGGGTTATCAGTATGCAGGCCTGCAATGCCCATGGCATATACTG TGTTCCGTTGTATGACACGCTAGGTGCTGGGGCTGTAGAATTTATACTGTGCCATGCTGA GGTAGAAATTGCTTTTATAGAGGAAAAGAAGATAGGAGAGGTGCTCAAGACATTTCCAAA TGCAACAAAGTATTTGAAGACAATTGTGAGCTTTGGAAAGGTCAATCCTGAACAAAAGGA AAAGGTTGAACAAAACGGAGTGTCCATCTACTCGTGGGAAGAGTTTTTGCAGTTGGGAGG TGAAGAAAAGTATGAACTTCCTACAAAGCAAAAGGATGATATCTGTACAATAATGTACAC CAGTGGAACAACTGGTGACCCTAAGGGAGTTTTAATCTCCAACAGGAGCATTATTACTAT TATTTCAGCAGTAGATGGGTTCCTTGCAAACTCAAAAGAGCAGCTTCGTGAAGATGATGT TTACATTTCTTATCTTCCTCTTGCCCATATCTTTGACCGTGTACTTGAGGAAGTGTTCAT TCACCATGGTGCATCAATTGGATTTTGGCGTGGAGATGTCAAACTCTTGGTTGAAGACAT TGGAGAACTCAAGCCAACAATTTTCTGCGCTGTTCCACGTGTACTAGACAGAATTTATGG AGGACTGCAAGATAAAGTTTCGACTGGTGGTTTCCTGAAGAAGACACTGTTTAATGTTGC TTACAAATACAAACAAGGGAATATGGTGAAAGGAAGCAAGCATGAAGAAGCTGCTGCCAT GTTCGATAAACTAGTCTTCACCAAGGTTAAACGAGGATTAGGTGGCAGAGTACGACTTAT TTTGTCTGGTGCAGCTCCCCTGTCTAATCATGTTGAAGAGTACCTGCGTGTGGTAACTTG CTCCCTTGTTCTTCAGGGCTATGGTCTTACTGAGACCTGTGCTGGGTCCTTCGTTTCCCT TCCAAACAACATGTCGATGCTGGGAACTGTAGGCCCTCCAGTCCCCTATGTCGAAGTACA CCTCGAGTCTGTTCCTGAAATGGGATATGATGCATTGTCAAAAGAATCACCTCGTGGGGA GATTTGCATCAGAGGGGACACCTTGTTCTCAGGGTACCACAAACGAGAAGACCTCACCAA GGAAGTTTTAGTCGATGGATGGTTTCACACAGGAGACATTGGTGAGTGGCAGTCTGATGG AAGCATGAAGATCATTGATCGCAAGAAGAACATCTTCAAGCTCTCCCAAGGAGAATATGT CGCTGTGGAGAATTTGGAGAACATATTCGGTCAAGCTCCTGGTGTTGATTCGATTTGGGT GTACGGGAATAGCTTCGAATCATGCTTGGTTGCAGTGGTCAACCCGAACAAGCAAGCTCT GGAACGATGGGCAGAGTCAAACGGGGTAACTGGAGACTTTGCTACCATGTGTGAAGATCC TAAAGCAAAAGAATTTATCTTGGGAGAATTAACCAAGACTGGTAAAGAAAAGAAGCTCAA AGGCTTTGAGCTCATCAGGGCTGTTCATCTGGAGCCAGTGCCATTCGATATGGATCGTGA CCTAATTACCCCAACTTACAAGAAGAAGCGGCCACAGCTGCTCAAATATTACCAGAACGT CATCGACAGCATGTATAAGAACATGAAGTAGGACTGGACTCATGGCGGTACGGTGGACCA AAACTTCACTTAGTAGTTTCGATGCGAACGGAAAGAAAGAATTTGGTGATAGTTAGGCTT ATTTTATTTCCATTTTCTCCTAAATTTGGACGTGTAATAGTTAGTCTTACATAGCCGTGC TAGCATGAGCGACCTCATATATTACCGTGTCAATTCTTGCATTTTCTTTGCACTGATAGA AAAGAGTGAACAGATACAAAACTGTTGCTGGCGAGTTTCTACTGTGTGAATTTACATTCT TTTATGGTAACAAGGACACATACTTTACTCC