Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0681000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:28033034:28051826:-1 gene:Os01g0681000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0089 domain containing protein. (Os01t0681000-01)
Sequence	ATGGATCATCTCGGCGGCATCAGGCTGCGGAGGCCGGTGCTGTCGATTGACAACGCGGAG CCCGCGGGGGAGACGGGGATGAGCGAGACGAAGAAGAAGGCGGCGGCGGTGGCGGAGGAG GAGGAGGAGTTGCTGGAGGAGCCGGTGAGCCCGGCGGGGCGGCTGTTCCGGGAGCCGCAC TTCAGCTGCTACATCGTGTGCACGTTGGGCGTCGCCGAGCCGGTCGACCTGCCCGCCGTC CGCGCCGGCATCGAGGCCACCCTCGCGCGCCACCCGCGCTTCTGCAGCATCCAGGTGTTG GACGAGCTGGATAAGAGCGCGAAGCCTATGTGGGTCCGGACCAAGGTGAACCTGGACGAC CACATCATCGTCCCGGACCTGGGCCCCACCGACACGTCGGCCGACCCGGAGAAGGCCGTG GAGGACTACGTGTCGTCGCTCTCCACGCCGTCCATGCCCATGGACCGCTCCCGCCCGCTC TGGGAGCTCCACGTCCTCGGCTTCCCCACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGC ATGCACCACTCCCTCGGCGACGGCGTCTCGTTGCTCTCCCTCCTCATCGCCTGCACCCGC CGCGCCGACGACCCGGACGCGATCCCGGCGCTCCCGTCCTCCGCCGCCGGCCGCCGCCGC CGCGAGGGCCCGCTGCACGCGCTGCCGCCCCGCCCGCCGCTCGCCGCGGGCGCGCTCGCG CTCGCCGCGTGGGCGCTGTCCTACCTCGTGCTCGCGTGGCACACGGTGGTGGACGTGGTC TGCTTCACCCTCACGGCGGCGTCGCTCATGGGCGACGCCCGCACGGTGCTCAAGGGCGAC GAGGGCGCCGAGTTCCGGCCCAGGCGCTTCGTGAATCGCACGATCAGCCTCGACGACGTC AAGAACATCAAGAACGCCGTGGGATGCACTGTAAATGATGTGCTGGTTGGACTGAGTTCT GCAGCATTGTCCCGGTATTATTTCCGGAGAACAGGTGAAAGTGAAGGAAAGAAGAACATC AAGGTGCGAACTGCTCTCATGGTCAACTTAAGGCCGACTCCTGGGCTACATGAACTGGCA AAAATGATGGAGTCTGGCAAGAACAACGGCGTGAAATGGGGGAATCGGTTTGGCTACATG ATACTGCCATTCCACCTAGCCAAGCACGATGACCCTCTGGAGTACGTCCGGAAAGCGACC AAGGTTACCCGCAGGAAGAAGAGCTCCATGGAGGCGATCTTCACCTACTGGAGCGCCGAC ATGGTAGTCAAACTTTTTGGCATCAAGGCGGCAGCTTCTCTCTGCTACGGAATGTTCTCG AACACCACACTGTCTTTCTCCAACCTGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGC AACCCGATCGTGTACATCTCCCCAACCAGCTATGGCCACCCGCATGCCTTGACAATGCAT TGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCA GATGCTCATGAGCTACTGGATGACTTCACCGAGTCCATGAGGCTCATCCGGGAGGCAGCT TCAAGAGGGACAGACAAAGCACAGGATGGTCCTTAA

Peptide Sequence

PEP ID	Os01t0681000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:28033034:28051826:-1 gene:Os01g0681000 transcript:Os01t0681000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0089 domain containing protein. (Os01t0681000-01)
Sequence	MDHLGGIRLRRPVLSIDNAEPAGETGMSETKKKAAAVAEEEEELLEEPVSPAGRLFREPH FSCYIVCTLGVAEPVDLPAVRAGIEATLARHPRFCSIQVLDELDKSAKPMWVRTKVNLDD HIIVPDLGPTDTSADPEKAVEDYVSSLSTPSMPMDRSRPLWELHVLGFPTAEAAATVALR MHHSLGDGVSLLSLLIACTRRADDPDAIPALPSSAAGRRRREGPLHALPPRPPLAAGALA LAAWALSYLVLAWHTVVDVVCFTLTAASLMGDARTVLKGDEGAEFRPRRFVNRTISLDDV KNIKNAVGCTVNDVLVGLSSAALSRYYFRRTGESEGKKNIKVRTALMVNLRPTPGLHELA KMMESGKNNGVKWGNRFGYMILPFHLAKHDDPLEYVRKATKVTRRKKSSMEAIFTYWSAD MVVKLFGIKAAASLCYGMFSNTTLSFSNLAGPSEQILFCGNPIVYISPTSYGHPHALTMH WQSYMNTIKLALAVDETQFPDAHELLDDFTESMRLIREAASRGTDKAQDGP

Transcript Sequence

Transcript ID	Os01t0681000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:28033034:28051826:-1 gene:Os01g0681000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0089 domain containing protein. (Os01t0681000-01)
Sequence	AGCCCTGGTCAAGAGTCTTCCCGGCGGCAAGACTCGTACGAATTCAATTCCCCTGCCAAG CCAAGACCGGCACCCACGGCCCCTAGGCTAGAAAAAGAGGAAAGGGCGCGCGCACGCGCG CTTGCGCTTAGCTGAAAAGAAGGCTGAAGCGATATGGATCATCTCGGCGGCATCAGGCTG CGGAGGCCGGTGCTGTCGATTGACAACGCGGAGCCCGCGGGGGAGACGGGGATGAGCGAG ACGAAGAAGAAGGCGGCGGCGGTGGCGGAGGAGGAGGAGGAGTTGCTGGAGGAGCCGGTG AGCCCGGCGGGGCGGCTGTTCCGGGAGCCGCACTTCAGCTGCTACATCGTGTGCACGTTG GGCGTCGCCGAGCCGGTCGACCTGCCCGCCGTCCGCGCCGGCATCGAGGCCACCCTCGCG CGCCACCCGCGCTTCTGCAGCATCCAGGTGTTGGACGAGCTGGATAAGAGCGCGAAGCCT ATGTGGGTCCGGACCAAGGTGAACCTGGACGACCACATCATCGTCCCGGACCTGGGCCCC ACCGACACGTCGGCCGACCCGGAGAAGGCCGTGGAGGACTACGTGTCGTCGCTCTCCACG CCGTCCATGCCCATGGACCGCTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGGCTTCCCC ACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGCATGCACCACTCCCTCGGCGACGGCGTC TCGTTGCTCTCCCTCCTCATCGCCTGCACCCGCCGCGCCGACGACCCGGACGCGATCCCG GCGCTCCCGTCCTCCGCCGCCGGCCGCCGCCGCCGCGAGGGCCCGCTGCACGCGCTGCCG CCCCGCCCGCCGCTCGCCGCGGGCGCGCTCGCGCTCGCCGCGTGGGCGCTGTCCTACCTC GTGCTCGCGTGGCACACGGTGGTGGACGTGGTCTGCTTCACCCTCACGGCGGCGTCGCTC ATGGGCGACGCCCGCACGGTGCTCAAGGGCGACGAGGGCGCCGAGTTCCGGCCCAGGCGC TTCGTGAATCGCACGATCAGCCTCGACGACGTCAAGAACATCAAGAACGCCGTGGGATGC ACTGTAAATGATGTGCTGGTTGGACTGAGTTCTGCAGCATTGTCCCGGTATTATTTCCGG AGAACAGGTGAAAGTGAAGGAAAGAAGAACATCAAGGTGCGAACTGCTCTCATGGTCAAC TTAAGGCCGACTCCTGGGCTACATGAACTGGCAAAAATGATGGAGTCTGGCAAGAACAAC GGCGTGAAATGGGGGAATCGGTTTGGCTACATGATACTGCCATTCCACCTAGCCAAGCAC GATGACCCTCTGGAGTACGTCCGGAAAGCGACCAAGGTTACCCGCAGGAAGAAGAGCTCC ATGGAGGCGATCTTCACCTACTGGAGCGCCGACATGGTAGTCAAACTTTTTGGCATCAAG GCGGCAGCTTCTCTCTGCTACGGAATGTTCTCGAACACCACACTGTCTTTCTCCAACCTG GCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACC AGCTATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAG CTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGCTACTGGATGACTTC ACCGAGTCCATGAGGCTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCACAGGAT GGTCCTTAAGTGTACAAATGTCGAATATATGCAAAAGAAAATTGCTGAAGATGATTGATG TATTGTAATTCTGAGTTCAATTCTTTGTAAAGGATAGAAGGATCTATACCAAATCAAAGT ATGGAAGGAAGAAGAAGAATTAGATCTTAAGGGGAAAAGGAAGAAGAGTATACAGAAACA GGTATTCTCATACTATTAGTTATACAGAAATTACACATCCACTGTCTGC