Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0680700-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:28017070:28021413:-1 gene:Os01g0680700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1639 family protein. (Os01t0680700-01);Hypothetical conserved gene. (Os01t0680700-02);Hypothetical conserved gene. (Os01t0680700-03)
Sequence

ATGCGTGGCTCCCTGGAGGTCCACGCGATTGGCAGACACGCCGCGTCGCCGTGCGCCCTG
AGACTGAAAGCCCTCCCGGCATTGGACATGATGAGGTACCAAAGGCTTAGCCCGGACTGC
CTCCCGCTAGCCAACGGCGGCGGCGGAGGAAGCGGTAGCGTGACACGGAAGCCGGCGTCG
AGATCCTGCAAGGACGACGATGGCGGCATGGCCGTCGCCGCGGACAGCTCCCGCCTCTCG
TCGTACCTCCCGTCGTCACAGCTCGATTCCAAGCCGCTGCGCGCTCGGGCGCCGCAGCCG
TCGTCCTCGTCGGCCGCCGCCTGGAGCCCGGCGCGCGACCACGCGCACGCCCACCACAAC
CACCACCACCACCACCACCCGTCCGACTCCTCCGACACGGCCTCGCCGAGCTCCAACGGC
GCGGGCACCGGTGGCGACGTGCTGCTGCAGTGGGGGCACAACAAGCGGTCCCGCTGCCGG
CGCGACGCGTCCTCCTCGGCCAACGCGGCTCCCTCCTCCTCGCAGCGCCGCCAGACCGCC
TCCGCCGCCGGCAAGATCCTGCGCCGCTCGTCGGCGCCGGCGGAGAAGCTCATGCCGCCG
CCGCCCCCATCCACCACCACCGGGTCGTACACGCGCGGGTCCAACCTGAGGTCCGCTTCG
TCCTTCCCGACGCGGTCCGCCGCCGCCGCCGCCGTCGGAGACGCACACCACCACAGGTCC
GCCGTGGAGGAGCGATCAGGCGGCGGGTACAAGCGGTCGCCGGACAAGGCGCACAAGTCC
GCCCTGGACGCGGCGCTGCACATGGATTCCAAGAACAACCACCATCACCACCACCACGAC
TCGTCGGTGACCGCAAACGGCGGCGCCGGCGCCGGCGAGAAGATCGGCTCCGAGCGGTTT
GAGCTGCCCCGGATCTACATCTCGCTGTCGCGCAAGGAGAAGGAGGACGACTTCTTGATC
ATGAAGGGCACCAAGCTGCCTCAGAGGCCCAAGAAGAGGGCCAAGAACGTGGACAAGACC
CTCCAAGTATGCCAATCTTTGCTCCGCAAACCGGCCTGA

Peptide Sequence

PEP ID

Os01t0680700-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:28017070:28021413:-1 gene:Os01g0680700 transcript:Os01t0680700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1639 family protein. (Os01t0680700-01);Hypothetical conserved gene. (Os01t0680700-02);Hypothetical conserved gene. (Os01t0680700-03)
Sequence

MRGSLEVHAIGRHAASPCALRLKALPALDMMRYQRLSPDCLPLANGGGGGSGSVTRKPAS
RSCKDDDGGMAVAADSSRLSSYLPSSQLDSKPLRARAPQPSSSSAAAWSPARDHAHAHHN
HHHHHHPSDSSDTASPSSNGAGTGGDVLLQWGHNKRSRCRRDASSSANAAPSSSQRRQTA
SAAGKILRRSSAPAEKLMPPPPPSTTTGSYTRGSNLRSASSFPTRSAAAAAVGDAHHHRS
AVEERSGGGYKRSPDKAHKSALDAALHMDSKNNHHHHHHDSSVTANGGAGAGEKIGSERF
ELPRIYISLSRKEKEDDFLIMKGTKLPQRPKKRAKNVDKTLQVCQSLLRKPA

Transcript Sequence

Transcript ID

Os01t0680700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:28017070:28021413:-1 gene:Os01g0680700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1639 family protein. (Os01t0680700-01);Hypothetical conserved gene. (Os01t0680700-02);Hypothetical conserved gene. (Os01t0680700-03)
Sequence

ATCGCCATTGCTGCCCTCCTCTCCGTCTTCCTCCTCCCTCCTCTGTCGCCTGTTCTTCTT
CTTCTCACGATTTTTTTCCCCTGTAAATTTCCCGGCGGCTTCTCGCATCTCGTTCATCGT
CGTCGTCTGCTCGCGACTTGACGGACGAGGAGGAGGAAGAAGGGAGCGATTGGTTTGGAC
GGTAAGAAAGGGAGGGACGCGCGGGCGGCCGGAGCCGGTGGCCGACGGCCATTTTTTCAT
GCGTGGCTCCCTGGAGGTCCACGCGATTGGCAGACACGCCGCGTCGCCGTGCGCCCTGAG
ACTGAAAGCCCTCCCGGCATTGGACATGATGAGGTACCAAAGGCTTAGCCCGGACTGCCT
CCCGCTAGCCAACGGCGGCGGCGGAGGAAGCGGTAGCGTGACACGGAAGCCGGCGTCGAG
ATCCTGCAAGGACGACGATGGCGGCATGGCCGTCGCCGCGGACAGCTCCCGCCTCTCGTC
GTACCTCCCGTCGTCACAGCTCGATTCCAAGCCGCTGCGCGCTCGGGCGCCGCAGCCGTC
GTCCTCGTCGGCCGCCGCCTGGAGCCCGGCGCGCGACCACGCGCACGCCCACCACAACCA
CCACCACCACCACCACCCGTCCGACTCCTCCGACACGGCCTCGCCGAGCTCCAACGGCGC
GGGCACCGGTGGCGACGTGCTGCTGCAGTGGGGGCACAACAAGCGGTCCCGCTGCCGGCG
CGACGCGTCCTCCTCGGCCAACGCGGCTCCCTCCTCCTCGCAGCGCCGCCAGACCGCCTC
CGCCGCCGGCAAGATCCTGCGCCGCTCGTCGGCGCCGGCGGAGAAGCTCATGCCGCCGCC
GCCCCCATCCACCACCACCGGGTCGTACACGCGCGGGTCCAACCTGAGGTCCGCTTCGTC
CTTCCCGACGCGGTCCGCCGCCGCCGCCGCCGTCGGAGACGCACACCACCACAGGTCCGC
CGTGGAGGAGCGATCAGGCGGCGGGTACAAGCGGTCGCCGGACAAGGCGCACAAGTCCGC
CCTGGACGCGGCGCTGCACATGGATTCCAAGAACAACCACCATCACCACCACCACGACTC
GTCGGTGACCGCAAACGGCGGCGCCGGCGCCGGCGAGAAGATCGGCTCCGAGCGGTTTGA
GCTGCCCCGGATCTACATCTCGCTGTCGCGCAAGGAGAAGGAGGACGACTTCTTGATCAT
GAAGGGCACCAAGCTGCCTCAGAGGCCCAAGAAGAGGGCCAAGAACGTGGACAAGACCCT
CCAAGTATGCCAATCTTTGCTCCGCAAACCGGCCTGATCTTATCTGCTCCGATCCATTCT
TGCATCTGTTCTGATCACAGAGCTAACATGTGTCTCGTGTTGCCCCCGATGTGATGTGCA
GTATGTATTCCCTGGGATGTGGCTTTCAGACTTGACGAGAGGACGGTATGAGGTGCGAGA
GAAGAAATGTGTGAAGAAGGTATACTCCACTCTGCACCTGGCATTTTCAGTTCATGCATT
CTGTGTATTTTTACAGACAAGAAGAGGAAAATTACCTAGATTTAGGGCATCAGTGACCCA
GATTGGTTGGGTCTAATGCAAAAATAAAGCCGAAGAGTAGGTGAATTACTTGCCCTTTTC
TTTTAGTTTGGCCCCTTCTCCCTCACATGGGGCCCATGACTCGTGATGCTCCGTGTCCTC
ATTGATGACGGCACGGCACTGATTTATTTGGCTCAGCTTTATTGCTGTGGACGTGGAGAT
GCAAGCGAACGATCATTCTATTGCCCTTACCTAAAGGAGTCTTCTTGTTCTACGTTTAGT
TGGATCCATTCGTTCATCTTTCTACATTTGTCATGTGCTTTCCCAGGCAAATCTCATTCA
AGAACACTACAGTCACAACTCACAACAAACCAGAGTGTGCCACATGTCATAGCAGAAAGA
ACAAAAAAAAGTCTTGGCCTCTTTCAGTATGGGGCCCAGCTGTCAGCCTCTTATCGTCCT
TAGCTAAGCATGAGAAAGAACTGTAGCATTATTACTACTTAGGTGGTGTTAGTTCAGTGC
TTAGCTGCGGGTGCGAGATTGTTGACAACTTGATTATTCCGGACCTTGAAGGCTTGAATG
CAAGTCGTCGTCGCTGACAAGTAGGGAAGGGCCAACGTGGAGACATGTATCTGTGTCTTT
TGTTAGGACCACATGATAATGTCTGGATAGAGCTTGGAATCATAACCATCGAAAAAGAGA
AGAAAAAGAAATGGTACAAAGGGTTGGAAAAGAAATTGTGGTGCTGTCTTTTGATCTACT
AGTCTGTTTTTCACCTTTTCCGTGATAGGGTCTTCAACTCATTCCCTTTGTTATTAGGAG
CATTCAAGCATGCTGTAGTTTAATGAGCTCCTGTAACATACTAACATGCATATATTTTCC
AATAGTAACAAGGCCAGCTCGAATCTTGT