Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0680600-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:28012727:28013713:1 gene:Os01g0680600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0680600-01);Conserved hypothetical protein. (Os01t0680600-02)
Sequence

ATGGCTATGCCGCTGCCGCCGCCGCCGCCGCCTCGTCCTCCTCTTGGACGGGGACGGCTC
GTCGGAGTAGGACCAGCTCCAGCACCAGCAACGGCCTCCCAATCCAACCGCCCAGTGCCC
CCCCTGCAGCTGCCTCGCTGCCGCTGCCATCGCTCGGAGGGACCCTGGAGGACGACGGCG
GCGGCGAACGGGAGGAGGCGGTGGTGGTCCGACGAGGACATGGAGGAAGAGGACGACGAG
GAGGGATACGGATACGACGACGGCGGCGCGCCAGGCGGGTCAGCGCAGGAGCTGTTCGGC
GAGCCATGGTTTTCCAAGCTCTTCCGTGCGTACGGCTACGTGCTGCCGCTGCTGCTGGCG
TCCATGCTGGTGGCCACGGGGCCCAGAGCTTTCCTCATGGCCATGGCGCTGCCGCTCGCC
CAGTCCGCCATCTCCTGGGTCGTCTCCTTCTTCACCACCAGGAGTCGTCGGCAGCAGGAG
GAGGAGGAGTCGTACGGATACGACTACGATGACGATCCCGCCTTCCAACGCCGAGAGGAA
GACGACGACGACGGCGACTACTATGATGCCGGGGCATGGCAATGGCGGAGCAGGAGCCAC
CAGCAATCGACCGAATCCGGCTCCGGTTTTGGAGGATGGGATGACCTCCTCTACGACGAT
GAGGAGAAGAAGGAGCAGGAGAGCTCAGGGAAGAAGAGGACGCCACCGGAGCCCGACACG
GCGGCGGCTGCTGCCGCCTCCGATCTGGGACTGGGATTGCGGGCGAGGAGAGGTCCACGA
CGCAGCAATGGCGGCATGTCGCGAGGAAGAAGCAGCAGCAGCATGAGGTATAACCAGGCG
CCACTGCTGACGCGCCTTCTCGTGGCACTCTTCCCCTTCCTCGGCTCATGGTTCAGGATA
CTCTAA

Peptide Sequence

PEP ID

Os01t0680600-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:28012727:28013713:1 gene:Os01g0680600 transcript:Os01t0680600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0680600-01);Conserved hypothetical protein. (Os01t0680600-02)
Sequence

MAMPLPPPPPPRPPLGRGRLVGVGPAPAPATASQSNRPVPPLQLPRCRCHRSEGPWRTTA
AANGRRRWWSDEDMEEEDDEEGYGYDDGGAPGGSAQELFGEPWFSKLFRAYGYVLPLLLA
SMLVATGPRAFLMAMALPLAQSAISWVVSFFTTRSRRQQEEEESYGYDYDDDPAFQRREE
DDDDGDYYDAGAWQWRSRSHQQSTESGSGFGGWDDLLYDDEEKKEQESSGKKRTPPEPDT
AAAAAASDLGLGLRARRGPRRSNGGMSRGRSSSSMRYNQAPLLTRLLVALFPFLGSWFRI
L

Transcript Sequence

Transcript ID

Os01t0680600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:28012727:28013713:1 gene:Os01g0680600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0680600-01);Conserved hypothetical protein. (Os01t0680600-02)
Sequence

GTAAGCTAGGCAATGGCTATGCCGCTGCCGCCGCCGCCGCCGCCTCGTCCTCCTCTTGGA
CGGGGACGGCTCGTCGGAGTAGGACCAGCTCCAGCACCAGCAACGGCCTCCCAATCCAAC
CGCCCAGTGCCCCCCCTGCAGCTGCCTCGCTGCCGCTGCCATCGCTCGGAGGGACCCTGG
AGGACGACGGCGGCGGCGAACGGGAGGAGGCGGTGGTGGTCCGACGAGGACATGGAGGAA
GAGGACGACGAGGAGGGATACGGATACGACGACGGCGGCGCGCCAGGCGGGTCAGCGCAG
GAGCTGTTCGGCGAGCCATGGTTTTCCAAGCTCTTCCGTGCGTACGGCTACGTGCTGCCG
CTGCTGCTGGCGTCCATGCTGGTGGCCACGGGGCCCAGAGCTTTCCTCATGGCCATGGCG
CTGCCGCTCGCCCAGTCCGCCATCTCCTGGGTCGTCTCCTTCTTCACCACCAGGAGTCGT
CGGCAGCAGGAGGAGGAGGAGTCGTACGGATACGACTACGATGACGATCCCGCCTTCCAA
CGCCGAGAGGAAGACGACGACGACGGCGACTACTATGATGCCGGGGCATGGCAATGGCGG
AGCAGGAGCCACCAGCAATCGACCGAATCCGGCTCCGGTTTTGGAGGATGGGATGACCTC
CTCTACGACGATGAGGAGAAGAAGGAGCAGGAGAGCTCAGGGAAGAAGAGGACGCCACCG
GAGCCCGACACGGCGGCGGCTGCTGCCGCCTCCGATCTGGGACTGGGATTGCGGGCGAGG
AGAGGTCCACGACGCAGCAATGGCGGCATGTCGCGAGGAAGAAGCAGCAGCAGCATGAGG
TATAACCAGGCGCCACTGCTGACGCGCCTTCTCGTGGCACTCTTCCCCTTCCTCGGCTCA
TGGTTCAGGATACTCTAAATTTGAGAAGAAGAAGAAAAACTGAGAGATTTCAGCATTCAG
AATGGATTGATTCATCGTCAGTTCGTC