Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0680400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:28009051:28011750:1 gene:Os01g0680400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-fold domain containing protein. (Os01t0680400-01)
Sequence

ATGAAGGACCCGTTCGAGGCGGCGGTGGAGGAGCAGGAGTCGCCGCCGGAGTCGCCGGCG
GCGAACGAGGAGGACGCGGCCGGGGCGCCCGAGGGATACGACGGCGCCAGCGGGTCGCGC
GGGCCTCCGCTGCGGCTGCCTCCTTCGAGGGCCGCGCCATCGGGCTCCGGTGGTGCCGCC
GCGGCCGCGGCGAGGGGTAAGGTGGTGCGGGTCCAGAAGGAGCAGCAGGAGGAGGAGGAT
GACGAGGAGGACCACATGGAGGTCGACCTCGACAAGCTGCCCTCCGGCACCAGCGACCCC
GACAAGCTCGCCAAGATGAATGCCATACTGTCTCAATTTACAGAAGACCAGATGAACCGG
TATGAGTCATTCCGCAGATCTGGATTCCAGAAATCTAACATGAAAAAGCTATTGGCGAGC
ATTACTGGCAGTCAAAAGATTTCTCTACCAACAACAATTGTAGTATCAGGAATTGCAAAG
ATGTTTGTTGGTGAGCTTGTTGAAACAGCTAGAATAGTTATGACTGAGAGGAAAGATTCT
GGACCAGTAAGGCCTTGCCACATCAGAGAAGCCTACAGAAGATTGAAACTTGAAGGGAAG
ATCCCACGGCGGACTGTTCCCAGGCTCTTCCGTTAG

Peptide Sequence

PEP ID

Os01t0680400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:28009051:28011750:1 gene:Os01g0680400 transcript:Os01t0680400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-fold domain containing protein. (Os01t0680400-01)
Sequence

MKDPFEAAVEEQESPPESPAANEEDAAGAPEGYDGASGSRGPPLRLPPSRAAPSGSGGAA
AAAARGKVVRVQKEQQEEEDDEEDHMEVDLDKLPSGTSDPDKLAKMNAILSQFTEDQMNR
YESFRRSGFQKSNMKKLLASITGSQKISLPTTIVVSGIAKMFVGELVETARIVMTERKDS
GPVRPCHIREAYRRLKLEGKIPRRTVPRLFR

Transcript Sequence

Transcript ID

Os01t0680400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:28009051:28011750:1 gene:Os01g0680400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-fold domain containing protein. (Os01t0680400-01)
Sequence

GCGGCCATGAAGGACCCGTTCGAGGCGGCGGTGGAGGAGCAGGAGTCGCCGCCGGAGTCG
CCGGCGGCGAACGAGGAGGACGCGGCCGGGGCGCCCGAGGGATACGACGGCGCCAGCGGG
TCGCGCGGGCCTCCGCTGCGGCTGCCTCCTTCGAGGGCCGCGCCATCGGGCTCCGGTGGT
GCCGCCGCGGCCGCGGCGAGGGGTAAGGTGGTGCGGGTCCAGAAGGAGCAGCAGGAGGAG
GAGGATGACGAGGAGGACCACATGGAGGTCGACCTCGACAAGCTGCCCTCCGGCACCAGC
GACCCCGACAAGCTCGCCAAGATGAATGCCATACTGTCTCAATTTACAGAAGACCAGATG
AACCGGTATGAGTCATTCCGCAGATCTGGATTCCAGAAATCTAACATGAAAAAGCTATTG
GCGAGCATTACTGGCAGTCAAAAGATTTCTCTACCAACAACAATTGTAGTATCAGGAATT
GCAAAGATGTTTGTTGGTGAGCTTGTTGAAACAGCTAGAATAGTTATGACTGAGAGGAAA
GATTCTGGACCAGTAAGGCCTTGCCACATCAGAGAAGCCTACAGAAGATTGAAACTTGAA
GGGAAGATCCCACGGCGGACTGTTCCCAGGCTCTTCCGTTAGAATTGAAGCATCTCTGTT
GATCCCAGTCGACACTGAGATGGTCCTTTCTGCGGTCAGATGCGCGGAAAGAGAGAATGA
CATGAGATGTATTTCTTCAGCTTTGTGAAATTGTTACTGTGATTTCTGTCGCAGCAAGGG
AACCAGAGCAAACAGTACGTACAAGCTGAAGTACTACGGTACTACTAGCCGTGGAAAATT
CTATGTATAAAGTATTGGCCGTAGGCTGTGAATTTTCAGGCTTATG