Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0678600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:27922318:27924335:1 gene:Os01g0678600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S20 family protein. (Os01t0678600-01);Similar to ribosomal protein rpS20. (Os01t0678600-02);Similar to ribosomal protein rpS20. (Os01t0678600-03)
Sequence	ATGGCGACCGCCACCTCCACGCTCTTCTCCCTCTCCTCCCTCTCCGCCTCTCTCCCTTCC CCCGCGCAGCCAGCCCCGGCGTCTCTCTCCCTCCGCGCCGTCTCCCCGCGGGCCCGCCTG TCCGCCTCCTACGCCGCCTTCCCCATCGGTGGGATCGGGGCATGGGCGGCGGCGACGCCG GCGTCGTCGGGGAGGTGGAGGAGGAGGGGACTGGAGGTGGTGTGCGAGGCGGCCAAGACC GGCACCGCGACCGGGAGGCGCCCGGACTCGGTCAAGAAGAGGGAGCGGCAGAACGACCGG CACCGCATCCGCAACCATGCACGCAAGGCCGAGATGCGCACCAGGATGAAGAAGGTTTTG AAAGCCCTTGAAAAGCTGAGAAAGAAAGCTGATGCCACACCTGAAGATATCATTCAAATA GAGAAATGGATTTCTGAGGCATACAAAGCCATTGACAAGACAGTGAAGGTTGGCGCCATG CACAGGAATACTGGTAACCATCGCAAGTCCCTTCTTGCGAGGAGGAAGAAGGCCATCGAG ATACTCCGTGGTTGGTATGTTCCAAACGCTGAACCTGCTGCTACCAGCTAG

Peptide Sequence

PEP ID	Os01t0678600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:27922318:27924335:1 gene:Os01g0678600 transcript:Os01t0678600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S20 family protein. (Os01t0678600-01);Similar to ribosomal protein rpS20. (Os01t0678600-02);Similar to ribosomal protein rpS20. (Os01t0678600-03)
Sequence	MATATSTLFSLSSLSASLPSPAQPAPASLSLRAVSPRARLSASYAAFPIGGIGAWAAATP ASSGRWRRRGLEVVCEAAKTGTATGRRPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVL KALEKLRKKADATPEDIIQIEKWISEAYKAIDKTVKVGAMHRNTGNHRKSLLARRKKAIE ILRGWYVPNAEPAATS

Transcript Sequence

Transcript ID	Os01t0678600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:27922318:27924335:1 gene:Os01g0678600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S20 family protein. (Os01t0678600-01);Similar to ribosomal protein rpS20. (Os01t0678600-02);Similar to ribosomal protein rpS20. (Os01t0678600-03)
Sequence	GGTGCTCCTCGAGCTCACTCCGCACCGCAGCCATGGCGACCGCCACCTCCACGCTCTTCT CCCTCTCCTCCCTCTCCGCCTCTCTCCCTTCCCCCGCGCAGCCAGCCCCGGCGTCTCTCT CCCTCCGCGCCGTCTCCCCGCGGGCCCGCCTGTCCGCCTCCTACGCCGCCTTCCCCATCG GTGGGATCGGGGCATGGGCGGCGGCGACGCCGGCGTCGTCGGGGAGGTGGAGGAGGAGGG GACTGGAGGTGGTGTGCGAGGCGGCCAAGACCGGCACCGCGACCGGGAGGCGCCCGGACT CGGTCAAGAAGAGGGAGCGGCAGAACGACCGGCACCGCATCCGCAACCATGCACGCAAGG CCGAGATGCGCACCAGGATGAAGAAGGTTTTGAAAGCCCTTGAAAAGCTGAGAAAGAAAG CTGATGCCACACCTGAAGATATCATTCAAATAGAGAAATGGATTTCTGAGGCATACAAAG CCATTGACAAGACAGTGAAGGTTGGCGCCATGCACAGGAATACTGGTAACCATCGCAAGT CCCTTCTTGCGAGGAGGAAGAAGGCCATCGAGATACTCCGTGGTTGGTATGTTCCAAACG CTGAACCTGCTGCTACCAGCTAGTCTATTGACAAATCGTCTTCAGGAATTCGCAGCAGAT TCATTGTCAACACGTCTTGCCAATTTTGGACATGCATATGTTGTTTAAGGAATTAAATAG CTTTGTTATATTCTCTCCATTCCAAGCGATGTGTATACCTTTGGTCCATGTTATGTGTTC ATGTTCTTGCTCTGGAAGCCTTGAAACAGAACTGGGCCAATACTTTTCTCCCACTTCTGT TATCCTTCACATCAGTGTTGTAAAATGACAAGCTGAAATATTTTTTTTCTATGGTAAGGA TGTTTTCAAAG