Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0676900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:27833978:27835938:1 gene:Os01g0676900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0676900-01)
Sequence

ATGAGTGGGAGCAACTTTGGAGACAGCATGGGATGGGGCAACAGCGGGAGGTCGTCGCCG
GCCGGCTCCTCCAGGAAGGGCAAGAGAGGCGGCGGCAGTGGCGGCGCGGATAAGCCGAAG
CAGCCGCAACGAGGGCTCGGGGTGGCGCAGCTGGAGAAGATCAGGTTACAGAGCGAAATG
GCCGAGTACTTCAACCCTCTTGGCCAGCCGGGAAGCTTGATCCACAGAACCGGCAGCCTT
AACTTGATGGCATATGGAGAACGAGGAGACGTACGATACGGTGAATTCCAAACTCCCATC
ATGAGATCACCAAGCAGCAGTACTATCTATGGTGCCCCACATTACACACATAATCCTAGC
ATCACATTGCCACTCTTTGAACCAGAGGAGTCTGCTCGCTTGAGGGGACACCATGACCGA
AGCCGATCGGCAGATTCGACAAGTATGAACTCTGACGATCCGCAAGATGTGGACCTCGAG
CTCAAGCTATGA

Peptide Sequence

PEP ID

Os01t0676900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:27833978:27835938:1 gene:Os01g0676900 transcript:Os01t0676900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0676900-01)
Sequence

MSGSNFGDSMGWGNSGRSSPAGSSRKGKRGGGSGGADKPKQPQRGLGVAQLEKIRLQSEM
AEYFNPLGQPGSLIHRTGSLNLMAYGERGDVRYGEFQTPIMRSPSSSTIYGAPHYTHNPS
ITLPLFEPEESARLRGHHDRSRSADSTSMNSDDPQDVDLELKL

Transcript Sequence

Transcript ID

Os01t0676900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:27833978:27835938:1 gene:Os01g0676900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0676900-01)
Sequence

TCCTGGCAAGCTAGCTAGGTCTTCTTCTTCTTGGACATGAGTGGGAGCAACTTTGGAGAC
AGCATGGGATGGGGCAACAGCGGGAGGTCGTCGCCGGCCGGCTCCTCCAGGAAGGGCAAG
AGAGGCGGCGGCAGTGGCGGCGCGGATAAGCCGAAGCAGCCGCAACGAGGGCTCGGGGTG
GCGCAGCTGGAGAAGATCAGGTTACAGAGCGAAATGGCCGAGTACTTCAACCCTCTTGGC
CAGCCGGGAAGCTTGATCCACAGAACCGGCAGCCTTAACTTGATGGCATATGGAGAACGA
GGAGACGTACGATACGGTGAATTCCAAACTCCCATCATGAGATCACCAAGCAGCAGTACT
ATCTATGGTGCCCCACATTACACACATAATCCTAGCATCACATTGCCACTCTTTGAACCA
GAGGAGTCTGCTCGCTTGAGGGGACACCATGACCGAAGCCGATCGGCAGATTCGACAAGT
ATGAACTCTGACGATCCGCAAGATGTGGACCTCGAGCTCAAGCTATGATATATCCTAAGA
TGTTTCTTCCTCCCCAGCTTCCTCTCTCTCTCTTCCCTGCCACCATCTGCTGCGAGGGAT
AGTTAATTTCTTAATTTTAGTCTTGATGGTTTTTTTCCTTGTGGTGCAATAAGTTTCTTA
ATTGGTGCCACTAGCTAGAACCAAAAGATTTGCCATCTTCTGTGCTGTAATGCGCACAAG
AAGAAAGGAATAGTGATGCACATTTTTTTTAAACAAGACGTTATGGGTATGGGAATCTCT
GCTG