Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0676200-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:27801444:27802403:1 gene:Os01g0676200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0676200-01);Conserved hypothetical protein. (Os01t0676200-02)
Sequence

ATGGCCGCCTCCTTCCTCCGCCCTCTCCTCCCCCCGAAACCCTTCCTCTCCGCCACTCCT
AAACCCCACATCCCCGCCGCTACCCCCAGTGCCATCGTGCGCTGCACCGCGGCGCCCAAG
CCGGCCACCGGCTCTATCGCCAAGCCCAGCCAAGAAGAGGCCAACAACAACCAGGAGCAA
GAACCCAACGCCGCCGCCGCCGCCACTCCGGACGAGGCCGGCGCCAACCCGCACCGCATC
CCCGACGACGAGACCCCGCCGTCTGCGACGGCGACCACGTCGTTCGCCGTGGCGCGGCGC
GTGCCGTCGGCCATCTCCCCCGACCGCCGGCGCCGGACGGCGCTGACGCAGGGGGAGCCG
CCGAACTACGAGATCGGGTGGAAGCGCACCAAGAAGCTGCCGCTGGAGAAGCCCAAGGGG
TGGGCCATCGCGGACTTCATGGAGAAGCTGGAGGGGCTGATGGCGCGCGGGCGGTACGGG
TCCGGGGAGCTGCTGGGCACAGTGGCCGGCGTGGTGACGGAGCGCGCGCGGGAGGAGGCC
GAGATCCTGGTGGCGGAGGGCGGCGTGGAGGAGCGCGTCGCGACGGAGCTCTTCCGCGTG
CTCCGGCTGGTGGAGATGGACGTCGCGATGGTCAAGGCCGCCGTCAAGGAGGAGACCGTC
AAGGAGCGCGTCGAGATGGCGCGCGCGCGCTGCCGCCAGGCCATCCTCGTCGCGCTCTCG
CTGTGA

Peptide Sequence

PEP ID

Os01t0676200-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:27801444:27802403:1 gene:Os01g0676200 transcript:Os01t0676200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0676200-01);Conserved hypothetical protein. (Os01t0676200-02)
Sequence

MAASFLRPLLPPKPFLSATPKPHIPAATPSAIVRCTAAPKPATGSIAKPSQEEANNNQEQ
EPNAAAAATPDEAGANPHRIPDDETPPSATATTSFAVARRVPSAISPDRRRRTALTQGEP
PNYEIGWKRTKKLPLEKPKGWAIADFMEKLEGLMARGRYGSGELLGTVAGVVTERAREEA
EILVAEGGVEERVATELFRVLRLVEMDVAMVKAAVKEETVKERVEMARARCRQAILVALS
L

Transcript Sequence

Transcript ID

Os01t0676200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:27801444:27802403:1 gene:Os01g0676200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0676200-01);Conserved hypothetical protein. (Os01t0676200-02)
Sequence

ATCTCTATCACTCGCTCTTCCGACCACGCCTCATCCGCCATGGCCGCCTCCTTCCTCCGC
CCTCTCCTCCCCCCGAAACCCTTCCTCTCCGCCACTCCTAAACCCCACATCCCCGCCGCT
ACCCCCAGTGCCATCGTGCGCTGCACCGCGGCGCCCAAGCCGGCCACCGGCTCTATCGCC
AAGCCCAGCCAAGAAGAGGCCAACAACAACCAGGAGCAAGAACCCAACGCCGCCGCCGCC
GCCACTCCGGACGAGGCCGGCGCCAACCCGCACCGCATCCCCGACGACGAGACCCCGCCG
TCTGCGACGGCGACCACGTCGTTCGCCGTGGCGCGGCGCGTGCCGTCGGCCATCTCCCCC
GACCGCCGGCGCCGGACGGCGCTGACGCAGGGGGAGCCGCCGAACTACGAGATCGGGTGG
AAGCGCACCAAGAAGCTGCCGCTGGAGAAGCCCAAGGGGTGGGCCATCGCGGACTTCATG
GAGAAGCTGGAGGGGCTGATGGCGCGCGGGCGGTACGGGTCCGGGGAGCTGCTGGGCACA
GTGGCCGGCGTGGTGACGGAGCGCGCGCGGGAGGAGGCCGAGATCCTGGTGGCGGAGGGC
GGCGTGGAGGAGCGCGTCGCGACGGAGCTCTTCCGCGTGCTCCGGCTGGTGGAGATGGAC
GTCGCGATGGTCAAGGCCGCCGTCAAGGAGGAGACCGTCAAGGAGCGCGTCGAGATGGCG
CGCGCGCGCTGCCGCCAGGCCATCCTCGTCGCGCTCTCGCTGTGACGACGGACGCACCGC
GTGGTGCCCAACTGTAATTCTGATTCCTTCACTGATTTCTCGCATAGCCACTATACACAG
TTGCAACTGGTCATCAGGTTTTTCGTGTATGTATACCTGAATTTTCAGTAGCATTTGCAA
TCAAACACTGAAACCATGTATACGAGAAATGGATGGGATAGCCAACTACGTGCACTTATT