Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0675500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:27757765:27760333:-1 gene:Os01g0675500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRREGULAR XYLEM 9L, glycosyltransferase family GT43 member F description:Similar to Glycoprotein-specific UDP-glucuronyltransferase-like protein. (Os01t0675500-01);Similar to galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1. (Os01t0675500-02)
Sequence	AGCGAGCCACAGGTTGAAGAGGGCCCACCAGTTCCTGCAATGTTGGATGACGAGGCGGAC TTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGATTCTGGCATTGTTGTGAGGAAG CACCTGATAATTATTACAACAACCTCTGTTCGACCACACCAGGCATATTACTTAAATCGT TTGGCTCATGTATTAAAAGATGTCCCGCCTCCTCTTCTGTGGATAGTGGCAGAGTGGCCA TATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTCTGGGATCATGTACAGACATCTT ATCTGCAATCGGAATACTACAAATATAAGGAAGATTGTTGTCTGCCAAAAGAATAATGCA ATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGTGCATTTCGCTGATGAAGAGAGA GCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAATAAGGCGTTTTGGTACATGGCCA GTAGCAATACATGTTGGGACAAAGTACAGAGTGGTTCTAGAAGGCCCCGTTTGTAAGGGT AATCAAGTCACTGGATGGCATACAAATCAGAGAAGGGGTGTATCACGTCGATTTCCAATT GGTTTCTCTGGATTTGCTTTTAACAGCACTATACTTTGGGATCCTCAGAGATGGAACAGC CCCACTTTAGAGTCTATTATAGTCCATTCAGGTGGCAGAGGTGGCTTGCAGTTAAACACG CCCTTTCAAGATCTGGTAAGCTCGGTTAACTTATTACACAATTATTGA

Peptide Sequence

PEP ID	Os01t0675500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:27757765:27760333:-1 gene:Os01g0675500 transcript:Os01t0675500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRREGULAR XYLEM 9L, glycosyltransferase family GT43 member F description:Similar to Glycoprotein-specific UDP-glucuronyltransferase-like protein. (Os01t0675500-01);Similar to galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1. (Os01t0675500-02)
Sequence	SEPQVEEGPPVPAMLDDEADFVEASPIVHSVNDSGIVVRKHLIIITTTSVRPHQAYYLNR LAHVLKDVPPPLLWIVAEWPYQSRETAEILRSSGIMYRHLICNRNTTNIRKIVVCQKNNA IFHIKKHRLDGIVHFADEERAYSADLFEEMRKIRRFGTWPVAIHVGTKYRVVLEGPVCKG NQVTGWHTNQRRGVSRRFPIGFSGFAFNSTILWDPQRWNSPTLESIIVHSGGRGGLQLNT PFQDLVSSVNLLHNY

Transcript Sequence

Transcript ID	Os01t0675500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:27757765:27760333:-1 gene:Os01g0675500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRREGULAR XYLEM 9L, glycosyltransferase family GT43 member F description:Similar to Glycoprotein-specific UDP-glucuronyltransferase-like protein. (Os01t0675500-01);Similar to galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1. (Os01t0675500-02)
Sequence	AGCGAGCCACAGGTTGAAGAGGGCCCACCAGTTCCTGCAATGTTGGATGACGAGGCGGAC TTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGATTCTGGCATTGTTGTGAGGAAG CACCTGATAATTATTACAACAACCTCTGTTCGACCACACCAGGCATATTACTTAAATCGT TTGGCTCATGTATTAAAAGATGTCCCGCCTCCTCTTCTGTGGATAGTGGCAGAGTGGCCA TATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTCTGGGATCATGTACAGACATCTT ATCTGCAATCGGAATACTACAAATATAAGGAAGATTGTTGTCTGCCAAAAGAATAATGCA ATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGTGCATTTCGCTGATGAAGAGAGA GCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAATAAGGCGTTTTGGTACATGGCCA GTAGCAATACATGTTGGGACAAAGTACAGAGTGGTTCTAGAAGGCCCCGTTTGTAAGGGT AATCAAGTCACTGGATGGCATACAAATCAGAGAAGGGGTGTATCACGTCGATTTCCAATT GGTTTCTCTGGATTTGCTTTTAACAGCACTATACTTTGGGATCCTCAGAGATGGAACAGC CCCACTTTAGAGTCTATTATAGTCCATTCAGGTGGCAGAGGTGGCTTGCAGTTAAACACG CCCTTTCAAGATCTGGTAAGCTCGGTTAACTTATTACACAATTATTGAGGTGAGGCAAAT GCAACCACTGTGGTACCAGTTAGATCAAGTACATAAGACAAAGTGCTGTGAAGAACTAGT AACACATGGCAATTCCTTGAGTCAAGATTTATCGAGAAGCTTGTTGAGGACGAGAGTCAA ATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGTCTGGAATTTCGAACTGGAACCT CCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTGTGCCA ATAACATAACTGTCCTGCTGCTCCTCTTTTTGTTTGCCATCCTAGTGTGAATGATGCCTT CCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCTCTGCCAAGATCTGGTCCAAATA ATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGACAAAAGAAAGTTTTTCTCTCTG TTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATTCATCCAGCTAGATATAGCCATG TACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATACATACATATCACCTCACAGATG TGAATGTTCCCCTCCATTGGAACTGTTGAAGAGCAAAGCAGATACTCTCTTTGATATACA TGAACAAAGGTTAAATCAAAACCATAGATTGTACACACAATGGTGTGCTTGGTCCT