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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0675100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:27745830:27747887:-1 gene:Os01g0675100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PRXIIC description:Similar to peroxiredoxin. (Os01t0675100-01)
Sequence

ATGGCCCCGGTTGCCGTGGGCGACACCCTCCCCGACGGCCAGCTGGGGTGGTTCGACGGG
GAGGACAAGCTGCAGCAGGTCTCCGTCCACGGCCTCGCCGCCGGCAAGAAGGTCGTCCTC
TTCGGCGTCCCCGGTGCCTTCACCCCGACCTGCAGCAATCAGCATGTGCCAGGATTCATA
AATCAGGCTGAGCAGCTCAAAGCCAAGGGTGTAGACGACATCTTGCTTGTCAGTGTTAAC
GACCCCTTTGTCATGAAGGCGTGGGCAAAGTCATACCCTGAGAATAAGCATGTGAAATTC
CTTGCCGATGGTTTGGGAACATACACCAAGGCACTTGGTCTTGAGCTTGACCTTTCGGAG
AAAGGGCTTGGTATTCGTTCGAGACGGTTTGCTCTCCTTGCTGACAACCTCAAGGTTACT
GTTGCAAACATTGAGGAAGGTGGCCAATTCACAATCTCTGGTGCTGAGGAGATCCTCAAG
GCACTGTAA

Peptide Sequence

PEP ID

Os01t0675100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:27745830:27747887:-1 gene:Os01g0675100 transcript:Os01t0675100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PRXIIC description:Similar to peroxiredoxin. (Os01t0675100-01)
Sequence

MAPVAVGDTLPDGQLGWFDGEDKLQQVSVHGLAAGKKVVLFGVPGAFTPTCSNQHVPGFI
NQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSE
KGLGIRSRRFALLADNLKVTVANIEEGGQFTISGAEEILKAL

Transcript Sequence

Transcript ID

Os01t0675100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:27745830:27747887:-1 gene:Os01g0675100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PRXIIC description:Similar to peroxiredoxin. (Os01t0675100-01)
Sequence

ATCTCCCTTCCCTGTCGATTACCTTCTCTCCTTCCTCTGTTCCTCCTCTCCTCCACACAT
CCAGGCAGGCAACACAAGAATCATCCGGGAGAGCGACATGGCCCCGGTTGCCGTGGGCGA
CACCCTCCCCGACGGCCAGCTGGGGTGGTTCGACGGGGAGGACAAGCTGCAGCAGGTCTC
CGTCCACGGCCTCGCCGCCGGCAAGAAGGTCGTCCTCTTCGGCGTCCCCGGTGCCTTCAC
CCCGACCTGCAGCAATCAGCATGTGCCAGGATTCATAAATCAGGCTGAGCAGCTCAAAGC
CAAGGGTGTAGACGACATCTTGCTTGTCAGTGTTAACGACCCCTTTGTCATGAAGGCGTG
GGCAAAGTCATACCCTGAGAATAAGCATGTGAAATTCCTTGCCGATGGTTTGGGAACATA
CACCAAGGCACTTGGTCTTGAGCTTGACCTTTCGGAGAAAGGGCTTGGTATTCGTTCGAG
ACGGTTTGCTCTCCTTGCTGACAACCTCAAGGTTACTGTTGCAAACATTGAGGAAGGTGG
CCAATTCACAATCTCTGGTGCTGAGGAGATCCTCAAGGCACTGTAAGAGCTTCAGCTCTT
AGGAACGGCAGCGATCACTTGGACCTATCGTGTCAATCTTGTTTAAATTTGTCTGCAAAA
TACTTGTGCGAATAAAATTGTCGATGAGCTGCCTAGTTGTGAGGACTTTATGATAATGTT
TGAATCTGTATCCACTGTTGAATCAAGTAGTAATGTTCAGTGCTCATGTT