Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0675000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:27742228:27745141:1 gene:Os01g0675000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop nucleotide exchanger, PRONE domain containing protein. (Os01t0675000-01)
Sequence

ATGGTGCGGCGGCACCTGCTGCGCGGACACAGCCTGGACAGGTTCCTGCCGATCAGGAGC
CTCATCATGTCGTCCAGCTCTTCCTTCTCGTCGTCGTCTCCGTCGCCGCCGCCGCCGTCG
TCGTCGTCGTCACGGGGAAGCAGCAGCGGCAGGTGGTGCGGCGTCAGCGTGGCCGAGGAG
GACGAGGACGATGCCGCCGTCTCCGCGACGACGACCCCGCCACTGCCGCCGCTGCAGAAG
CGGGTGCTGTCGAGGAGCCACGGGTCCAAGGCCAAGCCGCTGGGCGGCTCCGTCGACCAC
CTGCCGCCGGTGGTGCCGCCATCGTCGAAGAACGTCCGTGACAGTGGACCGCCTTCAGAG
ATTGATCTGGTGAAGGAGAAGTTCGCCAAGCTGCTGCTCGGCGAGGACATGTCCGGCACC
GGCAAAGGTGTCTCCTCCGCTCTTGCTCTCTCCAACGCCATCACAAATCTCGCAGCTTCG
GTATTCGGGGAGCAGCGCCGGCTCGAGCCCATGTCTGCCGACCGGAGAGCTCGATGGAAC
AAGGAGATCGACTGGCTGCTGTCGGTCACCGACCACATCGTCGAGTTCGTCCCTTCGCAA
CAGGCGTCCACGGATGGAACCAGCATGGAGGTGATGGGTACCCAGCAGCGCAGAGATCTT
CTCATCAATATCCCGGCATTGCGAAAACTCGACGCCATGCTCCTTGAGTATCTTGACAAT
TTCAAAGATGAACAAGAATTCTGGTACGTAAAAAAAGACGCAGATGAGGGTGAAAAGGGC
GATGCGCCAAGACAGGGCGACAAGTGGTGGATCCCTACAGTTCGAGTCCCTCCCGAGGGT
CTGCCAGATGCGTCGAAAAAATGGATTCTGCACCAGAAAGACCTTGTAGGGCAGGTGCTG
AAGGCAGCCATGGCTATCAATGCTGATGTTCTTACAGAGATGGAGATCCCGGGAGAGTAC
ATTGAAACTCTGCCTAAGAATGGAAGGTCTAGTCTTGGAGACTCGATATACAAAATTATA
ACTGATGATCATTTCGATCCCAATGAGCTCTTAAGTTCTGTAGACTTGTCGACAGAGCAC
AAGATCGTCGATCTCAAAGACCGAATTGAGGCCTCCGTTGTAATTTGGCAGAGGAAAATT
TCCAATAAGCTTTCCTGGGGCCCCGGTGTTAGCTTGGAGAAGCGAGAGCAGTTTGAAGAG
CGGGCGCAAACTGTCCTACTCATCCTCAAGCACCAGTTCCCTGGGGTTCCTCAGTCATCA
CTTGACATCAGCAAGATACAATACAACAAGGATGTTGGGTATGCCATCTTGGAGAGCTAC
TCCAGGACTCTTGAGAGCTTAGCCTTTGCAGTTTTATCTCGGATCGAGGATGTTCTTCAC
GCTGATGCCATTGCTAGAGACCCAAAGCGCACGAAATCAAGGAGAAGGCCCAGTCTAGTT
GACATCCCCGAGATCATTGACAATGCACTGGAGGAAGAGGAGACTGTGAACAGCATAGAT
GCCAATTCACAAGTGACCAACAACTCTATTCACTGGCAAGAGCAAGAACACGAGGACAAA
GGCGCGAGGCTGAGGAAAGTCCACCGCATGGTCACAAAGAAACTTTTGCACATTGAGAAA
GTTGATAATTTGGGGGGTGGGTTGAAAAGCTTTTCTCATAGGTAG

Peptide Sequence

PEP ID

Os01t0675000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:27742228:27745141:1 gene:Os01g0675000 transcript:Os01t0675000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop nucleotide exchanger, PRONE domain containing protein. (Os01t0675000-01)
Sequence

MVRRHLLRGHSLDRFLPIRSLIMSSSSSFSSSSPSPPPPSSSSSRGSSSGRWCGVSVAEE
DEDDAAVSATTTPPLPPLQKRVLSRSHGSKAKPLGGSVDHLPPVVPPSSKNVRDSGPPSE
IDLVKEKFAKLLLGEDMSGTGKGVSSALALSNAITNLAASVFGEQRRLEPMSADRRARWN
KEIDWLLSVTDHIVEFVPSQQASTDGTSMEVMGTQQRRDLLINIPALRKLDAMLLEYLDN
FKDEQEFWYVKKDADEGEKGDAPRQGDKWWIPTVRVPPEGLPDASKKWILHQKDLVGQVL
KAAMAINADVLTEMEIPGEYIETLPKNGRSSLGDSIYKIITDDHFDPNELLSSVDLSTEH
KIVDLKDRIEASVVIWQRKISNKLSWGPGVSLEKREQFEERAQTVLLILKHQFPGVPQSS
LDISKIQYNKDVGYAILESYSRTLESLAFAVLSRIEDVLHADAIARDPKRTKSRRRPSLV
DIPEIIDNALEEEETVNSIDANSQVTNNSIHWQEQEHEDKGARLRKVHRMVTKKLLHIEK
VDNLGGGLKSFSHR

Transcript Sequence

Transcript ID

Os01t0675000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:27742228:27745141:1 gene:Os01g0675000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop nucleotide exchanger, PRONE domain containing protein. (Os01t0675000-01)
Sequence

GCGCATGCCCCGTTTTTTGCGTGCGTGTGGTTTCCAACTTTGGCTCGCCCCTCCGGGCGC
AAACACCACAACACCTCGCGCCCATGCGAGGACGCAGCCATCCATCCATCCACCCAGCCC
CCACACTCCTTCGGCGCGCGCGTCCGTCCTCGATCGCGCGCGCGTCGACGAGCTAAGCCG
GCCCGGGAAACCCAAGGCCCCTCTCCCTTCCTCAAGCGCGCCGGCGGGCCTCGCCGGCGC
GCGACATTGAGCTCAACCCCCCCGTCGTAGTCGCACGTCGAGCGCCACCACCACCGCCAG
CGCGTCGCATCGTACGTCCTCCACGCGCGGCGCCGTGCTAGGCAACCTCCTCTGCTGATC
GCCCGCCTCCTCATGAGCGTGTGACCTGCTGTCGAATGGTGCGGCGGCACCTGCTGCGCG
GACACAGCCTGGACAGGTTCCTGCCGATCAGGAGCCTCATCATGTCGTCCAGCTCTTCCT
TCTCGTCGTCGTCTCCGTCGCCGCCGCCGCCGTCGTCGTCGTCGTCACGGGGAAGCAGCA
GCGGCAGGTGGTGCGGCGTCAGCGTGGCCGAGGAGGACGAGGACGATGCCGCCGTCTCCG
CGACGACGACCCCGCCACTGCCGCCGCTGCAGAAGCGGGTGCTGTCGAGGAGCCACGGGT
CCAAGGCCAAGCCGCTGGGCGGCTCCGTCGACCACCTGCCGCCGGTGGTGCCGCCATCGT
CGAAGAACGTCCGTGACAGTGGACCGCCTTCAGAGATTGATCTGGTGAAGGAGAAGTTCG
CCAAGCTGCTGCTCGGCGAGGACATGTCCGGCACCGGCAAAGGTGTCTCCTCCGCTCTTG
CTCTCTCCAACGCCATCACAAATCTCGCAGCTTCGGTATTCGGGGAGCAGCGCCGGCTCG
AGCCCATGTCTGCCGACCGGAGAGCTCGATGGAACAAGGAGATCGACTGGCTGCTGTCGG
TCACCGACCACATCGTCGAGTTCGTCCCTTCGCAACAGGCGTCCACGGATGGAACCAGCA
TGGAGGTGATGGGTACCCAGCAGCGCAGAGATCTTCTCATCAATATCCCGGCATTGCGAA
AACTCGACGCCATGCTCCTTGAGTATCTTGACAATTTCAAAGATGAACAAGAATTCTGGT
ACGTAAAAAAAGACGCAGATGAGGGTGAAAAGGGCGATGCGCCAAGACAGGGCGACAAGT
GGTGGATCCCTACAGTTCGAGTCCCTCCCGAGGGTCTGCCAGATGCGTCGAAAAAATGGA
TTCTGCACCAGAAAGACCTTGTAGGGCAGGTGCTGAAGGCAGCCATGGCTATCAATGCTG
ATGTTCTTACAGAGATGGAGATCCCGGGAGAGTACATTGAAACTCTGCCTAAGAATGGAA
GGTCTAGTCTTGGAGACTCGATATACAAAATTATAACTGATGATCATTTCGATCCCAATG
AGCTCTTAAGTTCTGTAGACTTGTCGACAGAGCACAAGATCGTCGATCTCAAAGACCGAA
TTGAGGCCTCCGTTGTAATTTGGCAGAGGAAAATTTCCAATAAGCTTTCCTGGGGCCCCG
GTGTTAGCTTGGAGAAGCGAGAGCAGTTTGAAGAGCGGGCGCAAACTGTCCTACTCATCC
TCAAGCACCAGTTCCCTGGGGTTCCTCAGTCATCACTTGACATCAGCAAGATACAATACA
ACAAGGATGTTGGGTATGCCATCTTGGAGAGCTACTCCAGGACTCTTGAGAGCTTAGCCT
TTGCAGTTTTATCTCGGATCGAGGATGTTCTTCACGCTGATGCCATTGCTAGAGACCCAA
AGCGCACGAAATCAAGGAGAAGGCCCAGTCTAGTTGACATCCCCGAGATCATTGACAATG
CACTGGAGGAAGAGGAGACTGTGAACAGCATAGATGCCAATTCACAAGTGACCAACAACT
CTATTCACTGGCAAGAGCAAGAACACGAGGACAAAGGCGCGAGGCTGAGGAAAGTCCACC
GCATGGTCACAAAGAAACTTTTGCACATTGAGAAAGTTGATAATTTGGGGGGTGGGTTGA
AAAGCTTTTCTCATAGGTAGCTGTAGCCTGAAAAAATGGTCAGACAGCTGCATGCTTGGT
TGTGCTACCGGGGGGAGCACCTGTAAATAGCTCAAACTTCAGAGAGGCTGGATGGGTTGT
ATTGGCGATTTGGCGGTGTAATCTGCTCATCTCAGTTGAGATGAAATCAGTATGCATATT
TCACGGCCTCATTTTGGTTGG