Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0674700-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:27725579:27731480:1 gene:Os01g0674700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB2279 (EMBRYO DEFECTIVE 2279). (Os01t0674700-00)
Sequence	ATGGCGGCGCCGCCGCCGAGCGCGACGGTGGGGCTGATTCCCAACCTGGCGGGGCGCGGG GTCTTGCTCCCCGCCTCGGCGCCTGATTCGAGCGCGTGCCACGGGTTCGTGGTTCCGACG AGGAGGAGGAGGAGGGTCTCCGTGGCGCCGTTTGGTTGGGGTTTGGCGAGGAGAGGCCGG GTTTCTGACGCGAGAGCGGATGGTTTTGGTGCTATGTGCGCGGTGGCTGGCGGCGAGGCT GGTCCCGGTTCGTCCGAGTTGCGGCACGTCGAGAAGGAGCTGACGTTTAGCCCGACTTTC ACCGACTATGTGAAGATCATGGAGTCGGTGAAGTTGGACAGGAGCAAGAGTTTAGAGAGC ACAGAATCGGATGGAAGGAGCTCGAGGAGGAGGTTTACAGGCGATGGCGATGCACCGGTT GTTCGGCGAGGGGACGAGAGGTCAGGTGATGGAAGGAGTACATCTTTTGATAGGCAAAAG GGATCTCAGAGGAACAGAGGGGATGTGAATGAGAGGAGCATGGCGAATAATGATATTCAG AACAATAGTATTAGGTTAGTAGAGAAAAAAAAGCCAGGTGATGTTGAAAAGCGTCGGGGA AGACAGGGAAAGGTAGATGAATATGTACAGAGAAGAATTGTTCGAGGTGAGATTAGTGAA GATGAAGGTAATGTTGATAAAAATGAGCGCAAGCAGTTTACATTGCAGTTGAAGATGAAA GATACTAGAGGTAGTATGGTTGCTCATCAATCAGAGAGAAACATGCATGTTCAGTCAAAT GCACGGAAGGGTTTGCAAAGACAGTCGACTTCGATGGTAAGCCATATTTCTAGCCCTTCA AACAGCAGAATTATATTGGAGAACACCAAGTCTTTGGTAAAAAGGGGAAAGGAGAACTTT AGTAGCCCAGCAAGAAGCATATATGAGAACAATTTCAAATATCCCAGAGAAAGAAAATTT ACCAACTATGATGTCAATGCTGATGATAAATTTCAAAGATACCAGCAAACAACAGAAAAT TCAGGGAGAGGTGTTGTAGTGGGAAGGTTTGGAGAGGGTGATATTGATTATAACAAGGCT ACTGTAAGCAAAAGATATGGCAATAGGCAGGCAACGTCTGGGCATGATGGTCATCCAACG GTCAGCTTGAAGCGTGGAAAACCTGAAGCAATTCGAATGCAGAGAGGGGAAAATGTCCAA ACAGGGAAGTTTATTAGGAGAGATGCGAAAGCTATAGACTTGGACGATAGAGCTGCTTTC AAGACTTTTGAGGTATTCACTGATGTCAGAAACAGGCCACGGGTTCTTCAAATGGAACTG GAAGATAGAATTCAGAAATTGGCTAGTCGGCTGAATGCTACAGATGTAAATACTCCAGAG TGGAAATTCTCCAAAATGATTCATGATGCAAAAATCAAATTCTCTGACCACTCTATCCTA AGGGTCGTTCAAATACTGGGTCGATATGGAAACTGGAAACGGGTCTTGCAAGTTGTTGAA TGGCTTCAATCCCGTGAAAGATTCAAGTCCTACAAGAGCAGGTATATTTATACAACAGTG CTTGATGTTCTTGGGAAGGCAAAAAGACCTTTTGAGGCATTGAATGTATTTTACACCATG CTGGATCAATTGTCTTCTTATCCTGACATGGCTGCTTATCATTGTATTGCTGTGACTCTT GGCCAATCTGGTCTTGTAAAAGAGCTATTTGATGTGATTGACCGCATGCGTTCTCCTCCT AAGAAGTTTAAGCTAAGTCCTATTCAGAATTGGGATCCTAGGTTGGAACCAGACCTCATT GTGTACAATGCGGTTCTGAATGCCTGTGTGCAACAAAAGCAATGGGAAGGAGCATTCTGG GTTCTGCAACAGTTGAAAGAGAAGAACATCCGCCCTACAAATACAACATATGGTCTTGTA ATGGAGGTAATGCTTGTTTGTGGCAAGTACAACTTGGTGTACGAGTTCTTCAATAAGGTG GAGAAAACGTCAATACCCGGCACTTTGAACTATAAAGTTCTCATTAATGCTCTTTGGAGA GAAGGGAAGATTGATGAAGCAGTCATGGCTGTCAAGGGTATGGAAAGTCGTGGAATAGTT GGTTCTGCCAGTCTTTATTATGACCTTGCTAGGTGCCTTTGCAGTGGAGGCCGGTGCAAA GAGGCACTTCTCCAGGTCGAGAAGATTTGCAAGGTTGCAAACAAACCACTGGTTGTTACC TACACAGGACTGATCCAAACCTGTATAGACAATGGAAGCATGGAAAATGCTAAATACATA TTTGACGAAATGTGCAAATACTGCTCACCTAATAACATAACATGCAACATCATGCTGAAG TCATACACTGAACATGGAATGTTTGAGGATGCAAAAGATCTATTGGAGAATATTCTCAGT GGCAGGATAAGGAGTAAAGTGGAATCGAGTCAAAAGGCAATTGCAGACAAGTTTACTTTC AATATTTTCATGGAGGCCTGTGCTGAAGCAAAGAGGTGGAATGATTTTGAGTATGCATTT CGCAAAATGTTATCTAGTGGCTACCACTTTGACGAACGAAGGCACCTTCGTATGGTGCTT GATGCATATAGGAACGGGAAGGAGCAGTTATTGGAAGATGTATGGGACTACATGTGCCAA TATGGCCGAGTTCCGCCTGCCCCCATGATAATGGAAAGATTTTGCCTGAAACTGAGACAA GGGGACACAGTGGCGGCGATGTCCTGCATCAATACCTTTCAGGAGAGCAAGATACGCAAT GTTTCATCCATGTCCTGGTTCAATCTGCTGAACCGTAATGGGGATCGCTTGAAGGAGGAT ATTATTATCAAGCTACTTCATGAACTCAACAACCTTGTAAGCTCAAGTGGTCACTCTGAT TCTTTGTATCAAAATATTATAAGTAGCTGTACAGAATTCCTTTCTGTTTCCACCTCTGTA GAAAAGGCGTCTTCTGATCAGCAGATGCTTCCCTGTACGTCATAG

Peptide Sequence

PEP ID	Os01t0674700-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:27725579:27731480:1 gene:Os01g0674700 transcript:Os01t0674700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB2279 (EMBRYO DEFECTIVE 2279). (Os01t0674700-00)
Sequence	MAAPPPSATVGLIPNLAGRGVLLPASAPDSSACHGFVVPTRRRRRVSVAPFGWGLARRGR VSDARADGFGAMCAVAGGEAGPGSSELRHVEKELTFSPTFTDYVKIMESVKLDRSKSLES TESDGRSSRRRFTGDGDAPVVRRGDERSGDGRSTSFDRQKGSQRNRGDVNERSMANNDIQ NNSIRLVEKKKPGDVEKRRGRQGKVDEYVQRRIVRGEISEDEGNVDKNERKQFTLQLKMK DTRGSMVAHQSERNMHVQSNARKGLQRQSTSMVSHISSPSNSRIILENTKSLVKRGKENF SSPARSIYENNFKYPRERKFTNYDVNADDKFQRYQQTTENSGRGVVVGRFGEGDIDYNKA TVSKRYGNRQATSGHDGHPTVSLKRGKPEAIRMQRGENVQTGKFIRRDAKAIDLDDRAAF KTFEVFTDVRNRPRVLQMELEDRIQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSIL RVVQILGRYGNWKRVLQVVEWLQSRERFKSYKSRYIYTTVLDVLGKAKRPFEALNVFYTM LDQLSSYPDMAAYHCIAVTLGQSGLVKELFDVIDRMRSPPKKFKLSPIQNWDPRLEPDLI VYNAVLNACVQQKQWEGAFWVLQQLKEKNIRPTNTTYGLVMEVMLVCGKYNLVYEFFNKV EKTSIPGTLNYKVLINALWREGKIDEAVMAVKGMESRGIVGSASLYYDLARCLCSGGRCK EALLQVEKICKVANKPLVVTYTGLIQTCIDNGSMENAKYIFDEMCKYCSPNNITCNIMLK SYTEHGMFEDAKDLLENILSGRIRSKVESSQKAIADKFTFNIFMEACAEAKRWNDFEYAF RKMLSSGYHFDERRHLRMVLDAYRNGKEQLLEDVWDYMCQYGRVPPAPMIMERFCLKLRQ GDTVAAMSCINTFQESKIRNVSSMSWFNLLNRNGDRLKEDIIIKLLHELNNLVSSSGHSD SLYQNIISSCTEFLSVSTSVEKASSDQQMLPCTS

Transcript Sequence

Transcript ID	Os01t0674700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:27725579:27731480:1 gene:Os01g0674700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB2279 (EMBRYO DEFECTIVE 2279). (Os01t0674700-00)
Sequence	GTGATGGCGGCGCCGCCGCCGAGCGCGACGGTGGGGCTGATTCCCAACCTGGCGGGGCGC GGGGTCTTGCTCCCCGCCTCGGCGCCTGATTCGAGCGCGTGCCACGGGTTCGTGGTTCCG ACGAGGAGGAGGAGGAGGGTCTCCGTGGCGCCGTTTGGTTGGGGTTTGGCGAGGAGAGGC CGGGTTTCTGACGCGAGAGCGGATGGTTTTGGTGCTATGTGCGCGGTGGCTGGCGGCGAG GCTGGTCCCGGTTCGTCCGAGTTGCGGCACGTCGAGAAGGAGCTGACGTTTAGCCCGACT TTCACCGACTATGTGAAGATCATGGAGTCGGTGAAGTTGGACAGGAGCAAGAGTTTAGAG AGCACAGAATCGGATGGAAGGAGCTCGAGGAGGAGGTTTACAGGCGATGGCGATGCACCG GTTGTTCGGCGAGGGGACGAGAGGTCAGGTGATGGAAGGAGTACATCTTTTGATAGGCAA AAGGGATCTCAGAGGAACAGAGGGGATGTGAATGAGAGGAGCATGGCGAATAATGATATT CAGAACAATAGTATTAGGTTAGTAGAGAAAAAAAAGCCAGGTGATGTTGAAAAGCGTCGG GGAAGACAGGGAAAGGTAGATGAATATGTACAGAGAAGAATTGTTCGAGGTGAGATTAGT GAAGATGAAGGTAATGTTGATAAAAATGAGCGCAAGCAGTTTACATTGCAGTTGAAGATG AAAGATACTAGAGGTAGTATGGTTGCTCATCAATCAGAGAGAAACATGCATGTTCAGTCA AATGCACGGAAGGGTTTGCAAAGACAGTCGACTTCGATGGTAAGCCATATTTCTAGCCCT TCAAACAGCAGAATTATATTGGAGAACACCAAGTCTTTGGTAAAAAGGGGAAAGGAGAAC TTTAGTAGCCCAGCAAGAAGCATATATGAGAACAATTTCAAATATCCCAGAGAAAGAAAA TTTACCAACTATGATGTCAATGCTGATGATAAATTTCAAAGATACCAGCAAACAACAGAA AATTCAGGGAGAGGTGTTGTAGTGGGAAGGTTTGGAGAGGGTGATATTGATTATAACAAG GCTACTGTAAGCAAAAGATATGGCAATAGGCAGGCAACGTCTGGGCATGATGGTCATCCA ACGGTCAGCTTGAAGCGTGGAAAACCTGAAGCAATTCGAATGCAGAGAGGGGAAAATGTC CAAACAGGGAAGTTTATTAGGAGAGATGCGAAAGCTATAGACTTGGACGATAGAGCTGCT TTCAAGACTTTTGAGGTATTCACTGATGTCAGAAACAGGCCACGGGTTCTTCAAATGGAA CTGGAAGATAGAATTCAGAAATTGGCTAGTCGGCTGAATGCTACAGATGTAAATACTCCA GAGTGGAAATTCTCCAAAATGATTCATGATGCAAAAATCAAATTCTCTGACCACTCTATC CTAAGGGTCGTTCAAATACTGGGTCGATATGGAAACTGGAAACGGGTCTTGCAAGTTGTT GAATGGCTTCAATCCCGTGAAAGATTCAAGTCCTACAAGAGCAGGTATATTTATACAACA GTGCTTGATGTTCTTGGGAAGGCAAAAAGACCTTTTGAGGCATTGAATGTATTTTACACC ATGCTGGATCAATTGTCTTCTTATCCTGACATGGCTGCTTATCATTGTATTGCTGTGACT CTTGGCCAATCTGGTCTTGTAAAAGAGCTATTTGATGTGATTGACCGCATGCGTTCTCCT CCTAAGAAGTTTAAGCTAAGTCCTATTCAGAATTGGGATCCTAGGTTGGAACCAGACCTC ATTGTGTACAATGCGGTTCTGAATGCCTGTGTGCAACAAAAGCAATGGGAAGGAGCATTC TGGGTTCTGCAACAGTTGAAAGAGAAGAACATCCGCCCTACAAATACAACATATGGTCTT GTAATGGAGGTAATGCTTGTTTGTGGCAAGTACAACTTGGTGTACGAGTTCTTCAATAAG GTGGAGAAAACGTCAATACCCGGCACTTTGAACTATAAAGTTCTCATTAATGCTCTTTGG AGAGAAGGGAAGATTGATGAAGCAGTCATGGCTGTCAAGGGTATGGAAAGTCGTGGAATA GTTGGTTCTGCCAGTCTTTATTATGACCTTGCTAGGTGCCTTTGCAGTGGAGGCCGGTGC AAAGAGGCACTTCTCCAGGTCGAGAAGATTTGCAAGGTTGCAAACAAACCACTGGTTGTT ACCTACACAGGACTGATCCAAACCTGTATAGACAATGGAAGCATGGAAAATGCTAAATAC ATATTTGACGAAATGTGCAAATACTGCTCACCTAATAACATAACATGCAACATCATGCTG AAGTCATACACTGAACATGGAATGTTTGAGGATGCAAAAGATCTATTGGAGAATATTCTC AGTGGCAGGATAAGGAGTAAAGTGGAATCGAGTCAAAAGGCAATTGCAGACAAGTTTACT TTCAATATTTTCATGGAGGCCTGTGCTGAAGCAAAGAGGTGGAATGATTTTGAGTATGCA TTTCGCAAAATGTTATCTAGTGGCTACCACTTTGACGAACGAAGGCACCTTCGTATGGTG CTTGATGCATATAGGAACGGGAAGGAGCAGTTATTGGAAGATGTATGGGACTACATGTGC CAATATGGCCGAGTTCCGCCTGCCCCCATGATAATGGAAAGATTTTGCCTGAAACTGAGA CAAGGGGACACAGTGGCGGCGATGTCCTGCATCAATACCTTTCAGGAGAGCAAGATACGC AATGTTTCATCCATGTCCTGGTTCAATCTGCTGAACCGTAATGGGGATCGCTTGAAGGAG GATATTATTATCAAGCTACTTCATGAACTCAACAACCTTGTAAGCTCAAGTGGTCACTCT GATTCTTTGTATCAAAATATTATAAGTAGCTGTACAGAATTCCTTTCTGTTTCCACCTCT GTAGAAAAGGCGTCTTCTGATCAGCAGATGCTTCCCTGTACGTCATAG