Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0673800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:27677194:27681560:-1 gene:Os01g0673800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:guanine nucleotide exchange factor for Rop 6 description:Similar to ATP synthase protein I -related. (Os01t0673800-01);Similar to ATP synthase protein I -related. (Os01t0673800-02);Similar to predicted protein. (Os01t0673800-03)
Sequence	ATGTCGCTGCCCGCCCTCGCCGCCGGCCGCGCCGCCTCCGTGCGGCCGCCGCGCGCCTCG GCGGCCTCGGGGGAGGCGGCTGCTGCTGCGGCGGCGGATCAGCCGGCGGGGCGGAGGCCG GTGAAGGTGATACTGCCGAAGAAGAAGCCGCAGAAGTGGTCGACGGGGATGGCGCCCGGG GAGTACGGCGGCGGGCCGGCGACGCCCAAGCCGCGCAAGTACTGGATGGGGAAGGAGGAC CGCGACCCCGTGGGCAACACCGACGACTTCATCTGGAACAAGGACTTCCTCCCACACATG GAGCGCGTCATCGCCAACGGCGGCGCAGACACGCCCCCCACCATCACCCGCCTCACCCCG GTGGATGAGGACTCGGAATCAGGGTTCCTAAGCATCAACCGCGCAATGAGCCTCGACAGT GTGGATGTTGATCTGAGCAAGGAGCTTCAGGCGCCAACCAGGCCAATCTTGAAAACCCAG GTTGAGGCTGCCTGGAGGGGGCGGGCCATTGGAGCTGAGGCTGTCAACGGTGTTGCGTCT CCTAGATGGAGGCTAGTTCCGACTCGCCGGGAACAAGCAAAGTGGGACCGAGCAGCTAAG GCAGCAACTGGTGGCAGTGATGTCATACTAAGGGAATCAAAGTCAAGAGGGCAGCAAGGA GACCCTGAGGTATTGGCAGCTAAATCAAGGGAGCAATATCTAGAGTTGAAACAAAGATTG CAGTTGTTTACTTTAGGCATTGGTGGCATTGGTTTGGTCTCCGCCTATTTTTCCTACTCT CCTGAGATTGCTGCAAGCTTTGGTGCAGGGCTGATTGGATCTGTCCTGTATCTCCGCATG CTTGGGACCAGTGTGGATTCCTTAGCTGGTGGAACTGGAGAAACTGTGAAGAGTGCTGCT GCCCAACCAAGACTGCTTATTCCAGTGGCACTTGTGATGATGTATAACCGATGGAATGAG ATTTTAGTTCCAGATTATGGCTTCATGCACCTGGAATTGATACCCATGCTTGTTGGGTTT TTCACCTACAAGATTGCAACATTTGCTCAGGCAATTCAAGAATCTATACCTGCAGTTGGG AATCGTGAATCTTGA

Peptide Sequence

PEP ID	Os01t0673800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:27677194:27681560:-1 gene:Os01g0673800 transcript:Os01t0673800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:guanine nucleotide exchange factor for Rop 6 description:Similar to ATP synthase protein I -related. (Os01t0673800-01);Similar to ATP synthase protein I -related. (Os01t0673800-02);Similar to predicted protein. (Os01t0673800-03)
Sequence	MSLPALAAGRAASVRPPRASAASGEAAAAAAADQPAGRRPVKVILPKKKPQKWSTGMAPG EYGGGPATPKPRKYWMGKEDRDPVGNTDDFIWNKDFLPHMERVIANGGADTPPTITRLTP VDEDSESGFLSINRAMSLDSVDVDLSKELQAPTRPILKTQVEAAWRGRAIGAEAVNGVAS PRWRLVPTRREQAKWDRAAKAATGGSDVILRESKSRGQQGDPEVLAAKSREQYLELKQRL QLFTLGIGGIGLVSAYFSYSPEIAASFGAGLIGSVLYLRMLGTSVDSLAGGTGETVKSAA AQPRLLIPVALVMMYNRWNEILVPDYGFMHLELIPMLVGFFTYKIATFAQAIQESIPAVG NRES

Transcript Sequence

Transcript ID	Os01t0673800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:27677194:27681560:-1 gene:Os01g0673800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:guanine nucleotide exchange factor for Rop 6 description:Similar to ATP synthase protein I -related. (Os01t0673800-01);Similar to ATP synthase protein I -related. (Os01t0673800-02);Similar to predicted protein. (Os01t0673800-03)
Sequence	ACGAGGTGTGTCTCTCTCCCGTTCACCCGTCCGTATCCTTCCCGGATCACTCTCTCCACT CTCCGCTCCCCACCGCGCGAGAGATATTTTCGCGCGCCATGTCGCTGCCCGCCCTCGCCG CCGGCCGCGCCGCCTCCGTGCGGCCGCCGCGCGCCTCGGCGGCCTCGGGGGAGGCGGCTG CTGCTGCGGCGGCGGATCAGCCGGCGGGGCGGAGGCCGGTGAAGGTGATACTGCCGAAGA AGAAGCCGCAGAAGTGGTCGACGGGGATGGCGCCCGGGGAGTACGGCGGCGGGCCGGCGA CGCCCAAGCCGCGCAAGTACTGGATGGGGAAGGAGGACCGCGACCCCGTGGGCAACACCG ACGACTTCATCTGGAACAAGGACTTCCTCCCACACATGGAGCGCGTCATCGCCAACGGCG GCGCAGACACGCCCCCCACCATCACCCGCCTCACCCCGGTGGATGAGGACTCGGAATCAG GGTTCCTAAGCATCAACCGCGCAATGAGCCTCGACAGTGTGGATGTTGATCTGAGCAAGG AGCTTCAGGCGCCAACCAGGCCAATCTTGAAAACCCAGGTTGAGGCTGCCTGGAGGGGGC GGGCCATTGGAGCTGAGGCTGTCAACGGTGTTGCGTCTCCTAGATGGAGGCTAGTTCCGA CTCGCCGGGAACAAGCAAAGTGGGACCGAGCAGCTAAGGCAGCAACTGGTGGCAGTGATG TCATACTAAGGGAATCAAAGTCAAGAGGGCAGCAAGGAGACCCTGAGGTATTGGCAGCTA AATCAAGGGAGCAATATCTAGAGTTGAAACAAAGATTGCAGTTGTTTACTTTAGGCATTG GTGGCATTGGTTTGGTCTCCGCCTATTTTTCCTACTCTCCTGAGATTGCTGCAAGCTTTG GTGCAGGGCTGATTGGATCTGTCCTGTATCTCCGCATGCTTGGGACCAGTGTGGATTCCT TAGCTGGTGGAACTGGAGAAACTGTGAAGAGTGCTGCTGCCCAACCAAGACTGCTTATTC CAGTGGCACTTGTGATGATGTATAACCGATGGAATGAGATTTTAGTTCCAGATTATGGCT TCATGCACCTGGAATTGATACCCATGCTTGTTGGGTTTTTCACCTACAAGATTGCAACAT TTGCTCAGGCAATTCAAGAATCTATACCTGCAGTTGGGAATCGTGAATCTTGAACATAGT TCTGGTGAATAGAATTAAAGGTAGTTGCCCTGAGGAAGATAGGTCACGGAGATACTGAGG CCAAGGTTTTATAAGAATCTGATCTGGGGATGTTACCAAGATAAGATGCACACTCAGTCA TTGAGGAGCGAGAATTCTCCATGACATCTGTTACACTCTCATTTGTTCAAAAAGATGATT GGCAAGAGGTCAAGTACACACACCTACCCCGTACATTCCATTTATTGCACGCCTACGGAC TACAGCAACTCTCAGCATTGTCACAGGTACCACATGAACACATGATCTATTGAATGACTT ATGGAGTAATTAACTGTGAATGGTGCAGAGCCAAAACATGGGCAACCAAAAGAACTCAAG AAGACGAAGATTTCAATAAATCACGGCTCAATCTGCCACTCTGATTCATCATCTCATTGC CTCGAGGCCTGCTGCTGCTGCTAGTAGTAGTAGTACATTCATTTGAACTGCCTACCAATT TTGAAAGCACCCAAATTTCCAAATTTCCTTTTCTTATCTCTTTCGTTGCTGGCCTCATCC ATTTGGCCACCAAAAGAATCCTAAAATGGTATCTCC