Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0673500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:27660018:27666746:-1 gene:Os01g0673500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0673500-01);Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3) (Katanin p60 subunit A1) (p60 katanin). Splice isoform 2. (Os01t0673500-02);Similar to predicted protein. (Os01t0673500-03)
Sequence	ATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGAGGTCTAC TACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGACGGCGAC GGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCACCCGCCCC TCCGCGGCGCACGCCAACGGCGGCGCCGACCTGGCCGTCTTCGAGCAGTTCGAGCGGCTG GAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAAATCCCTA CTTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAGGGATATC ATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGCAAAGCGT CTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAGGTCTGCTA TCACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGACAATGCTAGCA AAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATCAATTGTC AGTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGCAAGGCAT CATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACGTGGTGAA GCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACAGATGGAT GGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCCATGGGAA CTGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACCAGAGCAA GAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAATGAATATC CCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACGCCTTGTG TGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGGAAGGCAA GAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGACATTGAG CTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGAAAAATTC AATCAAGACTATGGCAGTCATGTCCTCAGCTAA

Peptide Sequence

PEP ID	Os01t0673500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:27660018:27666746:-1 gene:Os01g0673500 transcript:Os01t0673500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0673500-01);Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3) (Katanin p60 subunit A1) (p60 katanin). Splice isoform 2. (Os01t0673500-02);Similar to predicted protein. (Os01t0673500-03)
Sequence	MTGADEPSITRWTFEDFEVYYEVRLGIRREPGGDEDGDGDGGGGRGYAPLGSGSAGSTRP SAAHANGGADLAVFEQFERLERKVELRNGAIEAGPPQKSLLPSFESAEMRNLAETLLRDI IRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFKGLLSPWKGILLFGPPGTGKTMLA KAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGE ARSEHEASRRLKTELLIQMDGLTKTDDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEQ EARHAMFEELLPSVPGTMNIPYDVLVEKTEGYSGSDIRLVCKEAAMQPLRRLMSVLEGRQ EEVPEDELPEVGPVTTEDIELALRNTRPSAHLHVHRYEKFNQDYGSHVLS

Transcript Sequence

Transcript ID	Os01t0673500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:27660018:27666746:-1 gene:Os01g0673500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0673500-01);Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3) (Katanin p60 subunit A1) (p60 katanin). Splice isoform 2. (Os01t0673500-02);Similar to predicted protein. (Os01t0673500-03)
Sequence	GCTCCTCCTCACATCGCCAGCTCGTCCGCTTGCCCCGCACCGCAACCGCGGCGCGGAGGA GGAGAGCTCTCGCGCCGCGCGTGCGCGCGCGCGTGCGGGCGTGCGCGGGCGATCGAATCC GATCGCCATGACCGGCGCCGACGAGCCGTCCATCACCCGCTGGACCTTCGAGGACTTCGA GGTCTACTACGAGGTGCGCCTCGGCATCCGCCGCGAGCCCGGGGGAGATGAAGACGGCGA CGGCGACGGCGGCGGAGGTCGCGGCTACGCGCCGCTTGGATCCGGCTCCGCGGGCAGCAC CCGCCCCTCCGCGGCGCACGCCAACGGCGGCGCCGACCTGGCCGTCTTCGAGCAGTTCGA GCGGCTGGAGAGGAAGGTGGAGCTGCGGAATGGAGCAATTGAAGCTGGGCCTCCGCAGAA ATCCCTACTTCCTTCTTTTGAATCTGCAGAAATGCGCAATTTAGCTGAGACATTGTTGAG GGATATCATTCGTGGGAGTCCAGATGTCAAATGGGAAAGCATTAAAGGTTTGGAGAATGC AAAGCGTCTTCTGAAAGAAGCAGTTGTGATGCCTATAAAATACCCCAAGTACTTCAAAGG TCTGCTATCACCTTGGAAAGGTATATTGCTTTTTGGTCCACCAGGAACAGGAAAGACAAT GCTAGCAAAAGCTGTGGCTACTGAGTGCAAAACAACCTTCTTCAATATTTCAGCCTCATC AATTGTCAGTAAATGGCGTGGTGATTCGGAGAAACTAGTGAAAGTCTTATTTGAGCTTGC AAGGCATCATGCACCATCCACCATTTTTCTCGATGAGATTGATGCTATTATTAGCCAACG TGGTGAAGCTCGTAGTGAACATGAAGCCAGTCGGCGATTGAAGACTGAGCTATTAATACA GATGGATGGGTTAACTAAGACAGATGATCTCGTTTTTGTTCTAGCCGCCACAAATTTGCC ATGGGAACTGGATGCAGCAATGTTGCGCCGTTTGGAGAAACGTATTCTTGTTCCCTTACC AGAGCAAGAAGCTAGACATGCCATGTTTGAAGAGCTCTTGCCATCTGTTCCTGGCACAAT GAATATCCCATATGATGTTCTTGTGGAGAAAACTGAAGGATATTCAGGCTCTGATATACG CCTTGTGTGCAAGGAGGCGGCAATGCAACCCCTTAGAAGGTTAATGTCGGTTCTTGAAGG AAGGCAAGAAGAAGTGCCTGAGGATGAGTTGCCTGAAGTTGGTCCAGTAACGACAGAAGA CATTGAGCTTGCACTAAGGAATACACGGCCATCTGCTCATCTTCATGTACATAGATACGA AAAATTCAATCAAGACTATGGCAGTCATGTCCTCAGCTAAAGGTGAGTTGCAAAAGCAAA GGTTATTTGCACAACATAGATTGCTGAATTTCCTCCTTGAAGCTTGAACTGTTCCCTAGT ATTGTGGAAATCCTCCTGACGGAATCTTGCCGATAAGACTTTTCATTTGCACCTAGTATG GTTGATAGAATGCTGAATTACCGCTGATGTATTTACAACTAATGAGCATTCTCTTTACAC AATATTTGTTCCTGTACCATGTATATTATCATTTGTTTGACGAATAATAAGCTATTTGGG TAATCCTTGCCCTTTCGGAATATGAGAGAAACATTGTACATTTGTACTGGGTACC