Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0670800-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:27501506:27507181:-1 gene:Os01g0670800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin response factor-2, auxin response factor 2, OsETTIN2 description:Similar to Auxin response factor 2. (Os01t0670800-01);Ortholog of Arabidopsis ETTIN, Awn development (Os01t0670800-02)
Sequence	ATGGTGGGCATCGACCTCAACACCGTGGAGGAGGAGGAAGACGAGGAGGAGGGCGGCGCC ACCGGCACCGTCACGGCGCCTGCGGAGGCGAGGGCGGGGGGCGCGGTGTGCCTGGAGCTG TGGCACGCCTGCGCTGGCCCCGTGGCGCCGCTGCCGCGGAAGGGCAGCGCCGTCGTGTAC CTGCCGCAGGGCCACCTCGAGCACCTCGGGGCCGCGCCCGGCTCCGGCCCCGGCGCCGCG GTGCCGCCGCACGTGTTCTGCCGCGTCGTCGACGTCAGCCTCCACGCGGACGCCGCGACG GACGAGGTGTACGCGCAGGTCTCGTTGGTCGCCGACAACGAGGAAGTGGAGAGGCGGATG CGGGAGGGAGAGGACGGCGCGGCCTGCGACGGCGAGGGCGAGGACGCCGTGAAGCGGCCG GCCCGGATTCCCCACATGTTCTGCAAGACGCTCACGGCCTCCGACACCAGCACGCACGGC GGCTTCTCCGTGCCTCGCCGCGCCGCCGAGGACTGCTTCCCGCCGCTGGACTACAGCCTG CAGAGGCCATTCCAGGAGCTCGTGGCAAAGGATCTGCACGGCACGGAATGGAGGTTCAGA CATATCTATCGAGGCCAACCACGGAGGCACCTTTTAACCACTGGATGGAGCGGGTTTATC AACAAGAAGAAGCTAGTATCTGGGGATGCAGTGCTATTCCTCAGAGGTGAAGATGGAGAG CTTCGATTGGGAGTGCGCCGAGCTGCTCAGCTAAAAAATGCATCTCCTTTTCCTGCACTT CATAACCAGATCTCAAATACTAGTAGTCTTAGTGAAGTTGCACATGCTGTGGCCGTGAAA AGTATTTTTCACATCTACTACAATCCCAGGTTAAGTCAGTCTGAGTTCATTATACCATAT TGGAAGTTTATGAGAAGCTTCAGTCAACCCTTTTCTGTTGGAATGCGATTCAAATTGAGA TATGAGAGTGAGGATGCTTCTGAAAGAAGGCGTACTGGAATAATAATTGGAAGCAGAGAG GCAGATCCAATGTGGCATGGTTCGAAGTGGAAATGTTTAGTGGTGAAATGGGATGATGAT GTGGAGTGCCGTCGGCCTAATGGGGTATCTCCTTGGGAGATTGAGCTTAGTGGATCAGTT TCAGGATCTCATCTGTCCACTCCCCATTCAAAACGGCTGAAATCATGCTTCCCCCAAGTT AATCCAGATATTGTGCTTCCAAATGGAAGTGTTTCTTCAGATTTTGCGGAGTCTGCCAGA TTCCACAAGGTCTTGCAAGGTCAAGAATTGTTGGGTTTAAAAACTCGTGATGGTACTGTT AATACAGCTTCTCAGGCGACTGAGGCAAGAAATTTTCAGTACACTGATGAACGAAGTTGC TCTATCAACATGAGTAACAATATCTTAGGGGTTCCGAGACTTGGGGTGAAAACTCCAAGT GGAAACCCTGGGTTTTCCTACCATTGCTCAGGCTTTGGGGAATCTCAAAGATTCCAAGAG GTCTTGCAAGGTCAAGAAGTGTTTCGTCCTTACCGAGGAGGGACTTTGTCCGATGCCTGT ATAAGAGGTTCTGGCTTCCGTCAACCTGATGGCAACCATGCACCTGGTGCAGCATTTAAA TGGCTTGCACCACAAGGATGTGATCATCATGGGATAACCACATCAGTTCTGCCGCAAGCA TCCTCTCCATCATCTGTCTTAATGTTTCCACAAACTAGTTCAAAGATGCCTGGCCTTGAA TACATATACGGATGCCTGGATAGAAATGAGAATAGCCGACATTTTAAGATTGGACCTACA CAAGATATGACAAGAACTGATCAAACATTACGACTCTGGCCTCATCTTATTTCAGGCAAA GTGCTAGATGAGTGTACGAGAAATGAGAAGCTGCACTCTCCAGTCAGTGGTGCTGAGCAT GAATCAAATAACAAGTGTCTTAATACAAATGGCTGCAAAATCTTTGGTATATCATTGACT GAAAAGGCCCAAGCAGGCGATGAAGTGGATTGTGGCAATGCCAGTTATCATTCTCGGCTC CAGTCTTTAAAACCACAGATGCCAAAATCATTGGGCAGCAGTTGTGCCACGGTCCATGAA CAAAGGCCTGTTGTTGGCAGGGTCGTTGATATTTCAGCAGTGAATACGATGATCTGA

Peptide Sequence

PEP ID	Os01t0670800-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:27501506:27507181:-1 gene:Os01g0670800 transcript:Os01t0670800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin response factor-2, auxin response factor 2, OsETTIN2 description:Similar to Auxin response factor 2. (Os01t0670800-01);Ortholog of Arabidopsis ETTIN, Awn development (Os01t0670800-02)
Sequence	MVGIDLNTVEEEEDEEEGGATGTVTAPAEARAGGAVCLELWHACAGPVAPLPRKGSAVVY LPQGHLEHLGAAPGSGPGAAVPPHVFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRM REGEDGAACDGEGEDAVKRPARIPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSL QRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGE LRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPY WKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIGSREADPMWHGSKWKCLVVKWDDD VECRRPNGVSPWEIELSGSVSGSHLSTPHSKRLKSCFPQVNPDIVLPNGSVSSDFAESAR FHKVLQGQELLGLKTRDGTVNTASQATEARNFQYTDERSCSINMSNNILGVPRLGVKTPS GNPGFSYHCSGFGESQRFQEVLQGQEVFRPYRGGTLSDACIRGSGFRQPDGNHAPGAAFK WLAPQGCDHHGITTSVLPQASSPSSVLMFPQTSSKMPGLEYIYGCLDRNENSRHFKIGPT QDMTRTDQTLRLWPHLISGKVLDECTRNEKLHSPVSGAEHESNNKCLNTNGCKIFGISLT EKAQAGDEVDCGNASYHSRLQSLKPQMPKSLGSSCATVHEQRPVVGRVVDISAVNTMI

Transcript Sequence

Transcript ID	Os01t0670800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:27501506:27507181:-1 gene:Os01g0670800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin response factor-2, auxin response factor 2, OsETTIN2 description:Similar to Auxin response factor 2. (Os01t0670800-01);Ortholog of Arabidopsis ETTIN, Awn development (Os01t0670800-02)
Sequence	GCCTCTCCTCACCCACTCCGCTCTCCGCTCCATTAAACCCAAGCGAGGGACCTCGATCGC CTCCCCTCCTCGCTTCCCTCCCCGTCTCTCCTCTTTCGACCGCGTTGGAAGCAAGCGCGG CGGCGGCGCGGCGAGCTGCCGGTGGGGGGTTGCGGCTATGGTGGGCATCGACCTCAACAC CGTGGAGGAGGAGGAAGACGAGGAGGAGGGCGGCGCCACCGGCACCGTCACGGCGCCTGC GGAGGCGAGGGCGGGGGGCGCGGTGTGCCTGGAGCTGTGGCACGCCTGCGCTGGCCCCGT GGCGCCGCTGCCGCGGAAGGGCAGCGCCGTCGTGTACCTGCCGCAGGGCCACCTCGAGCA CCTCGGGGCCGCGCCCGGCTCCGGCCCCGGCGCCGCGGTGCCGCCGCACGTGTTCTGCCG CGTCGTCGACGTCAGCCTCCACGCGGACGCCGCGACGGACGAGGTGTACGCGCAGGTCTC GTTGGTCGCCGACAACGAGGAAGTGGAGAGGCGGATGCGGGAGGGAGAGGACGGCGCGGC CTGCGACGGCGAGGGCGAGGACGCCGTGAAGCGGCCGGCCCGGATTCCCCACATGTTCTG CAAGACGCTCACGGCCTCCGACACCAGCACGCACGGCGGCTTCTCCGTGCCTCGCCGCGC CGCCGAGGACTGCTTCCCGCCGCTGGACTACAGCCTGCAGAGGCCATTCCAGGAGCTCGT GGCAAAGGATCTGCACGGCACGGAATGGAGGTTCAGACATATCTATCGAGGCCAACCACG GAGGCACCTTTTAACCACTGGATGGAGCGGGTTTATCAACAAGAAGAAGCTAGTATCTGG GGATGCAGTGCTATTCCTCAGAGGTGAAGATGGAGAGCTTCGATTGGGAGTGCGCCGAGC TGCTCAGCTAAAAAATGCATCTCCTTTTCCTGCACTTCATAACCAGATCTCAAATACTAG TAGTCTTAGTGAAGTTGCACATGCTGTGGCCGTGAAAAGTATTTTTCACATCTACTACAA TCCCAGGTTAAGTCAGTCTGAGTTCATTATACCATATTGGAAGTTTATGAGAAGCTTCAG TCAACCCTTTTCTGTTGGAATGCGATTCAAATTGAGATATGAGAGTGAGGATGCTTCTGA AAGAAGGCGTACTGGAATAATAATTGGAAGCAGAGAGGCAGATCCAATGTGGCATGGTTC GAAGTGGAAATGTTTAGTGGTGAAATGGGATGATGATGTGGAGTGCCGTCGGCCTAATGG GGTATCTCCTTGGGAGATTGAGCTTAGTGGATCAGTTTCAGGATCTCATCTGTCCACTCC CCATTCAAAACGGCTGAAATCATGCTTCCCCCAAGTTAATCCAGATATTGTGCTTCCAAA TGGAAGTGTTTCTTCAGATTTTGCGGAGTCTGCCAGATTCCACAAGGTCTTGCAAGGTCA AGAATTGTTGGGTTTAAAAACTCGTGATGGTACTGTTAATACAGCTTCTCAGGCGACTGA GGCAAGAAATTTTCAGTACACTGATGAACGAAGTTGCTCTATCAACATGAGTAACAATAT CTTAGGGGTTCCGAGACTTGGGGTGAAAACTCCAAGTGGAAACCCTGGGTTTTCCTACCA TTGCTCAGGCTTTGGGGAATCTCAAAGATTCCAAGAGGTCTTGCAAGGTCAAGAAGTGTT TCGTCCTTACCGAGGAGGGACTTTGTCCGATGCCTGTATAAGAGGTTCTGGCTTCCGTCA ACCTGATGGCAACCATGCACCTGGTGCAGCATTTAAATGGCTTGCACCACAAGGATGTGA TCATCATGGGATAACCACATCAGTTCTGCCGCAAGCATCCTCTCCATCATCTGTCTTAAT GTTTCCACAAACTAGTTCAAAGATGCCTGGCCTTGAATACATATACGGATGCCTGGATAG AAATGAGAATAGCCGACATTTTAAGATTGGACCTACACAAGATATGACAAGAACTGATCA AACATTACGACTCTGGCCTCATCTTATTTCAGGCAAAGTGCTAGATGAGTGTACGAGAAA TGAGAAGCTGCACTCTCCAGTCAGTGGTGCTGAGCATGAATCAAATAACAAGTGTCTTAA TACAAATGGCTGCAAAATCTTTGGTATATCATTGACTGAAAAGGCCCAAGCAGGCGATGA AGTGGATTGTGGCAATGCCAGTTATCATTCTCGGCTCCAGTCTTTAAAACCACAGATGCC AAAATCATTGGGCAGCAGTTGTGCCACGGTCCATGAACAAAGGCCTGTTGTTGGCAGGGT CGTTGATATTTCAGCAGTGAATACGATGATCTGATACATTTACTGTATCCAGGGAGTATG CTTGCAGAAATAGGGACCAACATTAGTATCATACTCACTGGTGCTGAGGACACAACTTCC ATTCTGGCTATCTCGTCCCTCTACGTGCTTGTTGCCTCAACTTCAGCATTTCCACAGGCT GTGCTACCGCATCCAGGATGATGACAGGGGAAATGCAGATGATACACGAAGGATGCTTGT CAAGTTTGTTGTAATGCACTTCTAAGTTCTAAGCTTTGAACCTCTTAACGTTGCTCCTAT TTTAAGCTCCCGTTGTAATCGGCATTTATGTTGCCTGACCTACTTGCATATTTTTCAATT TGTCCGTTAAGACAGCCCTTTTAGAGGGCTTGCTTATGTTAGCAACCCTTAATTTCCAAA TTCCAAGTATGGCGACCGTTCGAGGGGTTTGTTTGCTCCTGGGACGACATCGGTACATGA CATAGAATCCATTGGTGACACCAGGGCACATCAGAATTAAGGTGTAGGGCG