Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0667700-04
CDS Infomation	cds chromosome:IRGSP-1.0:1:27303264:27312185:-1 gene:Os01g0667700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein, E3 ligase OsZFP1 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0667700-01);Similar to RING-finger protein like. (Os01t0667700-02);Similar to RING-finger protein like. (Os01t0667700-03);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0667700-04)
Sequence	ATGGCATATAGAAATACGGTATGCACTCCCCAAGTAATTGATCTAGAAACTGAACAAGGG CACTCTCATATTCATTCTGAAAGTTTTAATCGCACTGGGAATGATTCATCTGACCAAGGT GCACAACATGCTGTCAGAGGGGTAGGAAATGCTACAAACATTGGTCTATCTGATATGCGA AGTTACTATGATGCGGGCATGAACCATCCACATCAACCTGTTCATAACTTGCCTCCAAAT TTAGGAGTTGATTCAGGTTTTGTCTTCCCATCCAGTATGTACAACCCCTGCATGTCGACA ACATCTATGAACCAATATGTTTCTCACACTCAGAGCTTCGGATTGCCATCAAACCAAGTT GTTCTAGGAAGCATGGATGAAGGTAGCAGAAATGAAAATGCTGGTGAAAGTGCTAGAGGA TTCATTAAAAGGAAAAATGCTGCAGTTGCAGGAAGTTACCACTGTGCTAATGGATTTGCA AGTTCAAGCTCTTCTCATGCATCTCTGAATCCTACACATAGGCCATGGGATCCTTCTTTT GAGTCAAATGTTTTGCCTAACACTGCATCATATAACCCATCAGAGTACCATAGCCAGACC AGTTGGCCATCTATGGAAGGATCTTCCATTCCCAGTAATGGCTTTAATTTGATGGGTGCT CACCCAGAATCAGCACAGCATGGTAATTATGCATTTCCAACTAGTCACATCAGCCAGTGC TTTCAACCTACTAGCAATACATGGATTTCCCAGTCTGCAAATGGTATTGCTGATGGAATA CCACAGTGGGAATATGTCAATGGAATGAATAATGCTCCAGGCAGATTTTCCCGTTCAGGT ATGACAGAAACAGTGAATGGAAGCTTCCGTGAATATCAGAATGGCCCTTCAACCTTATGT CGAGGGCCTTTACCCTATTTTCATCAGCATGCTGGCATGCATGCTCATAATCTGCTTGAT CATACACAAGTGCAAGCTCCTTACCAACAATGCCACAATAATCCTGTCTTACATGGTGTA AATCATTCTGGCAACCGGTTCCATTTGGGTCCAAGGATTCCAGTTCTTTTCTCTAATTCT GAACGTACTTTTGGGCCTCCACATCATCCACTCTTGGCAAATCCAGTGAACCACAGAAAT ATACGAATCCTGCCACCTGAGCATGCTACAATAATGGATTTTTCAAGATTGTATGAAGTG TCAAATGTTGTAGATGAGCATAGAGATATGCGGCTAGATATAGACAGCATGACATATGAG GAGCTTTTAGCATTAGAAGAGCAGATTGGAGATGTAAATACTGGTCTGGCAAAAAGCTAC ATTGTAGAGAAATTGAAGACTAGCTTATTTGTGCCAGGATCATCCTGCATGTCTAATAAG TCTTCTGAATCTTCCATGGAGAATGATGCTTGCATAATATGCCAGGAAGAGTATCAGGTT AAAGAATGCATTGGAACCCTTGACTGTGGCCACAGGTACCACGAAGATTGCATAAAACAA TGGTTGATGGTAAAGAATTTATGCCCCATCTGCAAGACGACAGCTTTGTCAACCGGAAGA AGAAGTGGATAA

Peptide Sequence

PEP ID	Os01t0667700-04
PEP Infomation	pep chromosome:IRGSP-1.0:1:27303264:27312185:-1 gene:Os01g0667700 transcript:Os01t0667700-04 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein, E3 ligase OsZFP1 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0667700-01);Similar to RING-finger protein like. (Os01t0667700-02);Similar to RING-finger protein like. (Os01t0667700-03);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0667700-04)
Sequence	MAYRNTVCTPQVIDLETEQGHSHIHSESFNRTGNDSSDQGAQHAVRGVGNATNIGLSDMR SYYDAGMNHPHQPVHNLPPNLGVDSGFVFPSSMYNPCMSTTSMNQYVSHTQSFGLPSNQV VLGSMDEGSRNENAGESARGFIKRKNAAVAGSYHCANGFASSSSSHASLNPTHRPWDPSF ESNVLPNTASYNPSEYHSQTSWPSMEGSSIPSNGFNLMGAHPESAQHGNYAFPTSHISQC FQPTSNTWISQSANGIADGIPQWEYVNGMNNAPGRFSRSGMTETVNGSFREYQNGPSTLC RGPLPYFHQHAGMHAHNLLDHTQVQAPYQQCHNNPVLHGVNHSGNRFHLGPRIPVLFSNS ERTFGPPHHPLLANPVNHRNIRILPPEHATIMDFSRLYEVSNVVDEHRDMRLDIDSMTYE ELLALEEQIGDVNTGLAKSYIVEKLKTSLFVPGSSCMSNKSSESSMENDACIICQEEYQV KECIGTLDCGHRYHEDCIKQWLMVKNLCPICKTTALSTGRRSG

Transcript Sequence

Transcript ID	Os01t0667700-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:27303264:27312185:-1 gene:Os01g0667700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein, E3 ligase OsZFP1 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0667700-01);Similar to RING-finger protein like. (Os01t0667700-02);Similar to RING-finger protein like. (Os01t0667700-03);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0667700-04)
Sequence	CGGCTCCTCCCCTCTCCCCCGATCCCCTTCCTCCACCTCCACCCCCCACCCGCCGATCGC CCCCCGCGAGCTCGTCCCGTCGCGGCGGGCGATCGCTCCACCCACCCATCCACCTCCACC TTCCCGCGCGATTCCCCGAGAGGCGAGGCGAGGCGAGGCCGCTATAGCTCCGCTCCGCTC CCCGACCACCACGACGCGGCTGGCGGCGGATCCTCCACTCCACCCACCCACCCCGCTTCC GCCGATCGGATCGCGTGCTCCCCCCGAGGTAGAGGTGATGATAAATCATAGTTAGTGACT TAGCTTGCAGCAGTTCTTTCTTGCAGCTAAGACAAATAATAATTGGCGTTATGGCATATA GAAATACGGTATGCACTCCCCAAGTAATTGATCTAGAAACTGAACAAGGGCACTCTCATA TTCATTCTGAAAGTTTTAATCGCACTGGGAATGATTCATCTGACCAAGGTGCACAACATG CTGTCAGAGGGGTAGGAAATGCTACAAACATTGGTCTATCTGATATGCGAAGTTACTATG ATGCGGGCATGAACCATCCACATCAACCTGTTCATAACTTGCCTCCAAATTTAGGAGTTG ATTCAGGTTTTGTCTTCCCATCCAGTATGTACAACCCCTGCATGTCGACAACATCTATGA ACCAATATGTTTCTCACACTCAGAGCTTCGGATTGCCATCAAACCAAGTTGTTCTAGGAA GCATGGATGAAGGTAGCAGAAATGAAAATGCTGGTGAAAGTGCTAGAGGATTCATTAAAA GGAAAAATGCTGCAGTTGCAGGAAGTTACCACTGTGCTAATGGATTTGCAAGTTCAAGCT CTTCTCATGCATCTCTGAATCCTACACATAGGCCATGGGATCCTTCTTTTGAGTCAAATG TTTTGCCTAACACTGCATCATATAACCCATCAGAGTACCATAGCCAGACCAGTTGGCCAT CTATGGAAGGATCTTCCATTCCCAGTAATGGCTTTAATTTGATGGGTGCTCACCCAGAAT CAGCACAGCATGGTAATTATGCATTTCCAACTAGTCACATCAGCCAGTGCTTTCAACCTA CTAGCAATACATGGATTTCCCAGTCTGCAAATGGTATTGCTGATGGAATACCACAGTGGG AATATGTCAATGGAATGAATAATGCTCCAGGCAGATTTTCCCGTTCAGGTATGACAGAAA CAGTGAATGGAAGCTTCCGTGAATATCAGAATGGCCCTTCAACCTTATGTCGAGGGCCTT TACCCTATTTTCATCAGCATGCTGGCATGCATGCTCATAATCTGCTTGATCATACACAAG TGCAAGCTCCTTACCAACAATGCCACAATAATCCTGTCTTACATGGTGTAAATCATTCTG GCAACCGGTTCCATTTGGGTCCAAGGATTCCAGTTCTTTTCTCTAATTCTGAACGTACTT TTGGGCCTCCACATCATCCACTCTTGGCAAATCCAGTGAACCACAGAAATATACGAATCC TGCCACCTGAGCATGCTACAATAATGGATTTTTCAAGATTGTATGAAGTGTCAAATGTTG TAGATGAGCATAGAGATATGCGGCTAGATATAGACAGCATGACATATGAGGAGCTTTTAG CATTAGAAGAGCAGATTGGAGATGTAAATACTGGTCTGGCAAAAAGCTACATTGTAGAGA AATTGAAGACTAGCTTATTTGTGCCAGGATCATCCTGCATGTCTAATAAGTCTTCTGAAT CTTCCATGGAGAATGATGCTTGCATAATATGCCAGGAAGAGTATCAGGTTAAAGAATGCA TTGGAACCCTTGACTGTGGCCACAGGTACCACGAAGATTGCATAAAACAATGGTTGATGG TAAAGAATTTATGCCCCATCTGCAAGACGACAGCTTTGTCAACCGGAAGAAGAAGTGGAT AACGAACAGGAATAATCTTATTAGTTATTTACTTCCGACAAATATTCAGCTCAATTTTGT ATATAAGAAACGGTAGACCATTCTGCTACCTGTATTTGTTGCTCACTTTGTTGTGATCCG GGAGTAACTCAGCTTCCTAAACTGTACAGCCATAACATTGATCATTTTCTTCGGTGTAGA ATATTTTAAATTACTCAGTTCGCCCCCATCTGTATCATAAGGCGGACCGACAAAAAAACT CACAATGTCATTTCTAGGCAAACATTGTATCTACCATCAGATTAAAAATCAGAACAGAAC ATGTGCTCTTCTGT