Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0667000-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:27269167:27270223:-1 gene:Os01g0667000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 141 description:No apical meristem (NAM) protein domain containing protein. (Os01t0667000-00)
Sequence

CTCCGCCCACGGGTCGTCTCCGGCGACAAGCCGCCGCCGTCGTCGTCGTCGTGCGGGTTC
ATCATCCACGAGGCGGACGTGTACTCCGCCGACCCCGCCGACCTCACGAGGGGGTTCGCG
CCGGCGGTGGCGAGGAGCAGCGGCGACGAGGCGTGGTACTTCTTCAGCGCCGTGAGGGGG
CTCAAGGGCGGCCGCAAGGCGCGCACGGTGGACGACGGCGCCGGGTGCTGGCACTCGGAG
GCCGGCGCGAAGCCCGTGCTCGCCGCCTCCTCCGGCCGCCGCCTGGGGCACCGGCAGAGC
TTCTCCTTCATCACCAAGGACGACGACGGCCAGCGCGTCCGCTCCGGGTGGCTGATGGTG
GAGCTCAGCCTCGACGTCGACGAAGAGGAGCAGCTGGTCCTGAGCAAGGTCTACTTCAGC
CCGCGCGCGCCCGGCGCCAGGAAACCCACGACGGCGGCGGCGATGTCCCGCCACAAGAGG
AAGCTGTCCACCACCGACATCGCCTCACCGCCGCGGCGCCAGAGACGCCACCGTGTAGTA
CCATCATCTCCACCGGAGGAGCCGAACACGTCCCCGTCGCCGGCGGCTGCGCCTCCGGAC
CAGCAGGAAGGCGGCGACGACGACCCCGACCGCGGGAGCATTTCGTGGTGGCTGCGGAGG
GTGTTCGGCCTGACCGCCACCTTTACCGAGGAGGAGTCCATCGAGCTCAACCCATGGCTG
AAGGACATCCTGAGGCCGTTCCCGCCTCCCTTGCCGCCGACGCCGCCGCCTCCATGCCCG
AGCCCTCGCCGGAAGCTGATCGACATGCCGGAGATCAGGGAGTTCATCATGCGCGGGTCG
TACCTCGGCGGTGGCCCTGCACCTCCGCGCTACGAGTGCGATCATCCGGCCATGGTGATG
ACCGGCGGCGATGATCAGCAGCAGCTCGATGAGCAGCGCAGAGACGATGTTGGCGATGAT
CGAGCTCATTACGATCGGGTGGACGGCCAGCTGCAGTTCGAACGGCACTACCTGCAGTTG
TAA

Peptide Sequence

PEP ID

Os01t0667000-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:27269167:27270223:-1 gene:Os01g0667000 transcript:Os01t0667000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 141 description:No apical meristem (NAM) protein domain containing protein. (Os01t0667000-00)
Sequence

LRPRVVSGDKPPPSSSSCGFIIHEADVYSADPADLTRGFAPAVARSSGDEAWYFFSAVRG
LKGGRKARTVDDGAGCWHSEAGAKPVLAASSGRRLGHRQSFSFITKDDDGQRVRSGWLMV
ELSLDVDEEEQLVLSKVYFSPRAPGARKPTTAAAMSRHKRKLSTTDIASPPRRQRRHRVV
PSSPPEEPNTSPSPAAAPPDQQEGGDDDPDRGSISWWLRRVFGLTATFTEEESIELNPWL
KDILRPFPPPLPPTPPPPCPSPRRKLIDMPEIREFIMRGSYLGGGPAPPRYECDHPAMVM
TGGDDQQQLDEQRRDDVGDDRAHYDRVDGQLQFERHYLQL

Transcript Sequence

Transcript ID

Os01t0667000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:27269167:27270223:-1 gene:Os01g0667000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 141 description:No apical meristem (NAM) protein domain containing protein. (Os01t0667000-00)
Sequence

CCACCCTTCCGAGCAGGAGCTCATCGAGACGTAGCTCCGCCCACGGGTCGTCTCCGGCGA
CAAGCCGCCGCCGTCGTCGTCGTCGTGCGGGTTCATCATCCACGAGGCGGACGTGTACTC
CGCCGACCCCGCCGACCTCACGAGGGGGTTCGCGCCGGCGGTGGCGAGGAGCAGCGGCGA
CGAGGCGTGGTACTTCTTCAGCGCCGTGAGGGGGCTCAAGGGCGGCCGCAAGGCGCGCAC
GGTGGACGACGGCGCCGGGTGCTGGCACTCGGAGGCCGGCGCGAAGCCCGTGCTCGCCGC
CTCCTCCGGCCGCCGCCTGGGGCACCGGCAGAGCTTCTCCTTCATCACCAAGGACGACGA
CGGCCAGCGCGTCCGCTCCGGGTGGCTGATGGTGGAGCTCAGCCTCGACGTCGACGAAGA
GGAGCAGCTGGTCCTGAGCAAGGTCTACTTCAGCCCGCGCGCGCCCGGCGCCAGGAAACC
CACGACGGCGGCGGCGATGTCCCGCCACAAGAGGAAGCTGTCCACCACCGACATCGCCTC
ACCGCCGCGGCGCCAGAGACGCCACCGTGTAGTACCATCATCTCCACCGGAGGAGCCGAA
CACGTCCCCGTCGCCGGCGGCTGCGCCTCCGGACCAGCAGGAAGGCGGCGACGACGACCC
CGACCGCGGGAGCATTTCGTGGTGGCTGCGGAGGGTGTTCGGCCTGACCGCCACCTTTAC
CGAGGAGGAGTCCATCGAGCTCAACCCATGGCTGAAGGACATCCTGAGGCCGTTCCCGCC
TCCCTTGCCGCCGACGCCGCCGCCTCCATGCCCGAGCCCTCGCCGGAAGCTGATCGACAT
GCCGGAGATCAGGGAGTTCATCATGCGCGGGTCGTACCTCGGCGGTGGCCCTGCACCTCC
GCGCTACGAGTGCGATCATCCGGCCATGGTGATGACCGGCGGCGATGATCAGCAGCAGCT
CGATGAGCAGCGCAGAGACGATGTTGGCGATGATCGAGCTCATTACGATCGGGTGGACGG
CCAGCTGCAGTTCGAACGGCACTACCTGCAGTTGTAA