Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0666600-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:27246279:27247948:1 gene:Os01g0666600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0666600-00)
Sequence

ATGGCGTGCAGCTTCCCGCCTTCGTCCGCCACGAGGCTCCAGGCCGTGGACGCGGCGGCC
GTGAGGAGCAGCAGGGTGCCGCCTAGGGCGGCGACCGTATCCCCGGTGCAGAGATCGCTG
GGCGCCGGCTGCAAGGCCGCGGCTGCCGCCCGGCAGGAAGGCGCGACGCAGGACCCCGCC
ATCTCAGTTTCTTCGGCGCGCACCCAGTTGGATCTCCTGGAGCAGCTGACAACCCCTACA
TCTGATGGCATTGGCGTGGAGAACGGTGCTCCTACAGAACCCCGTGTGCAAACTACTATT
CGTGAGCAACTTTCAGCGGTTATCGGTGACAGGGACGGTGAGTACACCCTCCCGTTGGGC
AAGAAGCTCAAGGAAGGTCTGAAGAAACTCAACTCCCTGACCGTCTCCCAGAGGAGGAAC
ATCAAGAGGCAGGCCCTGCTCACCAAGGTCAGTGGACGGAATGACTCAGTGTTCTTCGCC
ACCGTTGGCGCATTTGTCCTAGTGCCGCCATTGGCCATCTTAGCTATTGCAGTCCTGACT
GGTTATGTGCAGCTCTTGCCGTGA

Peptide Sequence

PEP ID

Os01t0666600-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:27246279:27247948:1 gene:Os01g0666600 transcript:Os01t0666600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0666600-00)
Sequence

MACSFPPSSATRLQAVDAAAVRSSRVPPRAATVSPVQRSLGAGCKAAAAARQEGATQDPA
ISVSSARTQLDLLEQLTTPTSDGIGVENGAPTEPRVQTTIREQLSAVIGDRDGEYTLPLG
KKLKEGLKKLNSLTVSQRRNIKRQALLTKVSGRNDSVFFATVGAFVLVPPLAILAIAVLT
GYVQLLP

Transcript Sequence

Transcript ID

Os01t0666600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:27246279:27247948:1 gene:Os01g0666600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0666600-00)
Sequence

ATTTTTGTTTTTGCCACGACCGACTTTCCAGCGAAGTCGAGGAAGAGGAGGAGGAGAGGG
TGAGCCATGGCGTGCAGCTTCCCGCCTTCGTCCGCCACGAGGCTCCAGGCCGTGGACGCG
GCGGCCGTGAGGAGCAGCAGGGTGCCGCCTAGGGCGGCGACCGTATCCCCGGTGCAGAGA
TCGCTGGGCGCCGGCTGCAAGGCCGCGGCTGCCGCCCGGCAGGAAGGCGCGACGCAGGAC
CCCGCCATCTCAGTTTCTTCGGCGCGCACCCAGTTGGATCTCCTGGAGCAGCTGACAACC
CCTACATCTGATGGCATTGGCGTGGAGAACGGTGCTCCTACAGAACCCCGTGTGCAAACT
ACTATTCGTGAGCAACTTTCAGCGGTTATCGGTGACAGGGACGGTGAGTACACCCTCCCG
TTGGGCAAGAAGCTCAAGGAAGGTCTGAAGAAACTCAACTCCCTGACCGTCTCCCAGAGG
AGGAACATCAAGAGGCAGGCCCTGCTCACCAAGGTCAGTGGACGGAATGACTCAGTGTTC
TTCGCCACCGTTGGCGCATTTGTCCTAGTGCCGCCATTGGCCATCTTAGCTATTGCAGTC
CTGACTGGTTATGTGCAGCTCTTGCCGTGAATATATATGAAGGTGTGTGTTTTTTAGTAC
TCATCTTCAGACCTTTAATATATAGGAACATACTTTTGCTCTGCAAGAGAAACTGTATAT
ATATATGGTCAGATTTGTATATGGGTAAGTAGGTTTGGTCCATTTTGATCTGCTTGCTAC
GGTATATGTGATGCTGTAACTTGTAAGAATTTGATGTGCCATAAATCTAGCACAAGGGAG
CATCGATAGAATGGATCT