Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0666500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:27243443:27246045:-1 gene:Os01g0666500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cytochrome B561-related. (Os01t0666500-01)
Sequence

ATGTCGTCGCCGGGAGAGAGCGGGCCTTCGGCTTCGGCAAAGGACACGGATGCCGCGCAG
AGGGCGCAGGAGCAGGAGCCCGGGAAGCAGGGGGGCGCGACGAGGGAGCGGCGGATGGAG
TCGCTGGGGTGGCTGACGGAGTCGGCGGTGATGCCGAAGAAGCACAAGGCCATCGAGGGG
GTCGGCGCCGCGTCCATCCTCGACCTCAAGGCGCAGCTCTACCGCACCCAGGAGGAGGCC
CGCAAGCCCACCGCCCACGACGCCGCCGCGGCGGCTGCTGCCTCGGGCGAGTTCCGCCGG
GCCAAGAAGCGCGCCGCTCCTGGTGACCCCCTCGGCGCGAAGAATTCCGGCGTCGATGCC
CGCGCCCACAAAGATAAGTTGGAGCTAAAAGCTGTGAAGGATGGTTCAGTAAGTTATGCT
GCCTTAGAAAAGAAGGCAGAATTGTATGAAAAATTATCAAGAGGCGAGATACCTGATGAA
GAAGACAAGGAAAAATATTGTGTTGACTTTTTCCAAAAGAGTTTCGATCATGTCTATGAG
CCTCGGCAACCAGAGAGCCAGAGTGTTATTGACAGGGCAGAACCAGAAAATGACAATGAT
GATTCTATGTCAAGTGCCAAACCAGTAGGCCTTGGTCGAACTGGCACTACTATTGACAGA
GATGAGCACAAGCGCTTTGTAAGGGAGGTTCATGAGGAAGTAAGTGAGGCAAGGCAGAAG
GCTTCAACAATGAAATCCCGACGACAAGAGCAGGAGGCTGCTCGTAGAGAGAAACTCAAG
CAGGCTTATTTGAAGAAACGCCTGGAGAAGTTACTTGCTGAGAAACGGGCCACTTCAGCA
ACCGACGACCAACCAGCTAGCTAG

Peptide Sequence

PEP ID

Os01t0666500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:27243443:27246045:-1 gene:Os01g0666500 transcript:Os01t0666500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cytochrome B561-related. (Os01t0666500-01)
Sequence

MSSPGESGPSASAKDTDAAQRAQEQEPGKQGGATRERRMESLGWLTESAVMPKKHKAIEG
VGAASILDLKAQLYRTQEEARKPTAHDAAAAAAASGEFRRAKKRAAPGDPLGAKNSGVDA
RAHKDKLELKAVKDGSVSYAALEKKAELYEKLSRGEIPDEEDKEKYCVDFFQKSFDHVYE
PRQPESQSVIDRAEPENDNDDSMSSAKPVGLGRTGTTIDRDEHKRFVREVHEEVSEARQK
ASTMKSRRQEQEAARREKLKQAYLKKRLEKLLAEKRATSATDDQPAS

Transcript Sequence

Transcript ID

Os01t0666500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:27243443:27246045:-1 gene:Os01g0666500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cytochrome B561-related. (Os01t0666500-01)
Sequence

GCCGACCTCCCCTCTCCTTTCCTCTTCTTCCCCACCGGCGAGTCGGCGGCGACCGATCCC
TCCCCGAGCCGCCGCCGCCGCCGCGATGTCGTCGCCGGGAGAGAGCGGGCCTTCGGCTTC
GGCAAAGGACACGGATGCCGCGCAGAGGGCGCAGGAGCAGGAGCCCGGGAAGCAGGGGGG
CGCGACGAGGGAGCGGCGGATGGAGTCGCTGGGGTGGCTGACGGAGTCGGCGGTGATGCC
GAAGAAGCACAAGGCCATCGAGGGGGTCGGCGCCGCGTCCATCCTCGACCTCAAGGCGCA
GCTCTACCGCACCCAGGAGGAGGCCCGCAAGCCCACCGCCCACGACGCCGCCGCGGCGGC
TGCTGCCTCGGGCGAGTTCCGCCGGGCCAAGAAGCGCGCCGCTCCTGGTGACCCCCTCGG
CGCGAAGAATTCCGGCGTCGATGCCCGCGCCCACAAAGATAAGTTGGAGCTAAAAGCTGT
GAAGGATGGTTCAGTAAGTTATGCTGCCTTAGAAAAGAAGGCAGAATTGTATGAAAAATT
ATCAAGAGGCGAGATACCTGATGAAGAAGACAAGGAAAAATATTGTGTTGACTTTTTCCA
AAAGAGTTTCGATCATGTCTATGAGCCTCGGCAACCAGAGAGCCAGAGTGTTATTGACAG
GGCAGAACCAGAAAATGACAATGATGATTCTATGTCAAGTGCCAAACCAGTAGGCCTTGG
TCGAACTGGCACTACTATTGACAGAGATGAGCACAAGCGCTTTGTAAGGGAGGTTCATGA
GGAAGTAAGTGAGGCAAGGCAGAAGGCTTCAACAATGAAATCCCGACGACAAGAGCAGGA
GGCTGCTCGTAGAGAGAAACTCAAGCAGGCTTATTTGAAGAAACGCCTGGAGAAGTTACT
TGCTGAGAAACGGGCCACTTCAGCAACCGACGACCAACCAGCTAGCTAGTCCAGGTTTTG
TATGTCCTCACTTATGTCCTGTAGCAGCCTTAGTAGTTTCATGGCAATTCATCATGAGTT
TTCCTTTGAAAGTGGTTCTTTGATTTAGCAGAACCAAATTCAGAAAACGTTGTCATGTAA
AGTTGTTTCTACAGTTTGATTCAAACAATGTTGTTTCTACAGCATGTAATTGTACAAATC
TACACAATTGAAAGGCATCTTCATCTT