Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0666400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:27240118:27241139:-1 gene:Os01g0666400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0666400-01)
Sequence

GAGTGGGACCGCCAGGCCGCGCTCTGCGACTACATCCCCTTCCGCCCCGCCGGCGCGCCC
GCCGCCGTCGTGGCGCTGCGGGGCACGCTCCTCAGGGCGCCCACGTTCCGCCGCGACGTC
ACCGACGACCTCCGGTTCCTCGCGTGGGACAGCCTCAAGGGCTCCGTCCGCTTCGCCGGC
GCGCTCGCCGCGCTGCGCGCCGCCACGGGCAGGCTCGGCGCCGGGAGCGTGTGCGTCGGC
GGCCACTCGCTGGGCGCCGGGTTCGCGCTGCAGGTGGGGAAGGCGCTCGCCAAGGAGGGC
GTCTTCGTGGAGTGCCACGTCTTCAACCCGCCGTCCGTGTCGCTGGCCATGAGCCTCAGG
GGTTTCGCCGAGACCGCCGGCGAGCTGTGGGGGCGCGTGCGGTCGTGGATCCCCTACTAC
GGTGGCTCCTCCTCCTCCTCCTCCCAGGCCGCGGACGCCGGCGGCGGCGGCGAGAGCGAG
GAGGCGAAGGCGATGTGCAGGTGGCTGCCGCACCTGTACATCAACACCAACGACTACATC
TGCTGCTACTACAACGACGCGGCGGCCGGGACGGCGACCGTGGCGGCCGGAGGAGGAGGA
GGCGGGAGCGCGAGCGGCAAGGCGGTGGCGGCGGCTGCGGCGGTGCGAGGGACCGGCGGC
GGCGGCGCGCGCGTGGCGAGGATGCTGGTGGCGTCCAAGGGCCCGACCAAGTTCTTGGAG
GCGCATGGGCTGGAGCAGTGGTGGGCCGACGACGTCGAGCTGCAGGTGGCGCTCAACCAC
AGCAAGCTCATCGACCGGCAGCTCAGGTCGCTCTACGCCGCCCCGCCGGCCGCCGCAAGC
TAG

Peptide Sequence

PEP ID

Os01t0666400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:27240118:27241139:-1 gene:Os01g0666400 transcript:Os01t0666400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0666400-01)
Sequence

EWDRQAALCDYIPFRPAGAPAAVVALRGTLLRAPTFRRDVTDDLRFLAWDSLKGSVRFAG
ALAALRAATGRLGAGSVCVGGHSLGAGFALQVGKALAKEGVFVECHVFNPPSVSLAMSLR
GFAETAGELWGRVRSWIPYYGGSSSSSSQAADAGGGGESEEAKAMCRWLPHLYINTNDYI
CCYYNDAAAGTATVAAGGGGGGSASGKAVAAAAAVRGTGGGGARVARMLVASKGPTKFLE
AHGLEQWWADDVELQVALNHSKLIDRQLRSLYAAPPAAAS

Transcript Sequence

Transcript ID

Os01t0666400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:27240118:27241139:-1 gene:Os01g0666400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0666400-01)
Sequence

TCGAGTGGGACCGCCAGGCCGCGCTCTGCGACTACATCCCCTTCCGCCCCGCCGGCGCGC
CCGCCGCCGTCGTGGCGCTGCGGGGCACGCTCCTCAGGGCGCCCACGTTCCGCCGCGACG
TCACCGACGACCTCCGGTTCCTCGCGTGGGACAGCCTCAAGGGCTCCGTCCGCTTCGCCG
GCGCGCTCGCCGCGCTGCGCGCCGCCACGGGCAGGCTCGGCGCCGGGAGCGTGTGCGTCG
GCGGCCACTCGCTGGGCGCCGGGTTCGCGCTGCAGGTGGGGAAGGCGCTCGCCAAGGAGG
GCGTCTTCGTGGAGTGCCACGTCTTCAACCCGCCGTCCGTGTCGCTGGCCATGAGCCTCA
GGGGTTTCGCCGAGACCGCCGGCGAGCTGTGGGGGCGCGTGCGGTCGTGGATCCCCTACT
ACGGTGGCTCCTCCTCCTCCTCCTCCCAGGCCGCGGACGCCGGCGGCGGCGGCGAGAGCG
AGGAGGCGAAGGCGATGTGCAGGTGGCTGCCGCACCTGTACATCAACACCAACGACTACA
TCTGCTGCTACTACAACGACGCGGCGGCCGGGACGGCGACCGTGGCGGCCGGAGGAGGAG
GAGGCGGGAGCGCGAGCGGCAAGGCGGTGGCGGCGGCTGCGGCGGTGCGAGGGACCGGCG
GCGGCGGCGCGCGCGTGGCGAGGATGCTGGTGGCGTCCAAGGGCCCGACCAAGTTCTTGG
AGGCGCATGGGCTGGAGCAGTGGTGGGCCGACGACGTCGAGCTGCAGGTGGCGCTCAACC
ACAGCAAGCTCATCGACCGGCAGCTCAGGTCGCTCTACGCCGCCCCGCCGGCCGCCGCAA
GCTAGGCCGACGAAATTGCTCTCAACCAATGACGTTGATTGTACTGCTTTAGTACCCAGA
TTACATTCTACCTGGAGGATTTACTTACGAGTATCTCAAAGGTTTATAGAAGAGTGGTTA
AAAAAATTGCGTAAAAAAAATTAAGATTAGGATATCTCAAAAACAAATAAAGCGAGTTTG
AT