Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0666000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:27226175:27230292:-1 gene:Os01g0666000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diphosphate phosphatase). (Os01t0666000-01)
Sequence	ATGCCGGCCGACGCGCGAGCTGCTCCGCCGTCGTGCCCGTTCCCGACGATACGGTCGCAT GGCGCCGCCGTGGCGAGGTCGCACGCCTACGACTGGCTCGCGCTGCTCCTCCTCGTCGCC GTCGACGGCCTCCTCAACGCCATCGAGCCGTTCCACCGGTTCGTCGGCGCCGGCATGATG ACCGATCTCAGATACCCCATGAAGCGCAACACCGTCCCCATCTGGGCCGTCCCGATCGTC GCTGTCATTGGGCCCATGATTGTCTTCACCGTCGTCTACTTCAGGAGGAGGAACGTGTAC GATCTTCACCATGCTGTGCTAGGCATTCTGTTTTCGGTGCTGATTACCGGCGTGCTCACC GACGCGATCAAGGATGCCGTCGGCCGCCCGAGGCCGAACTTCTTCTGGCGCTGCTTCCCC GACGGAATCGCGGTGTTCGATAACGTCACCACGGGAGTCATCTGCCACGGCGACGCGAGC GTGATCAAGGAGGGACACAAGAGCTTCCCGAGCGGCCACACTTCATGGTCTTTCGCCGGT CTGGGGTTCCTGTCGTGGTACCTTGCCGGGAAGATCACGGTGTTCGACCGGCGCGGGCAC GTCGCCAAGCTGTGCGTCGTCCTCGCGCCTCTGCTCGTTGCGGCGATGGTCGCCATCTCG AGGGTGGACGACTACTGGCACCATTGGCAAGACGTCTGCACGGGAGGCGTCCTTGGATTG GTGGTTGCCTCTGTCTGCTATCTTCAGTTCTTCCCGGCTCCTTCAGATGAGAAAGGGTTC TGGCCTCACGCGCACTTTAGGTACATCACCGAGAGGGGAAGCGAGAACCCAACGCAGCAA GCCACCGAACCACTGGACGCCATGGAAACCGGTAGGGGAGGCCAATGA

Peptide Sequence

PEP ID	Os01t0666000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:27226175:27230292:-1 gene:Os01g0666000 transcript:Os01t0666000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diphosphate phosphatase). (Os01t0666000-01)
Sequence	MPADARAAPPSCPFPTIRSHGAAVARSHAYDWLALLLLVAVDGLLNAIEPFHRFVGAGMM TDLRYPMKRNTVPIWAVPIVAVIGPMIVFTVVYFRRRNVYDLHHAVLGILFSVLITGVLT DAIKDAVGRPRPNFFWRCFPDGIAVFDNVTTGVICHGDASVIKEGHKSFPSGHTSWSFAG LGFLSWYLAGKITVFDRRGHVAKLCVVLAPLLVAAMVAISRVDDYWHHWQDVCTGGVLGL VVASVCYLQFFPAPSDEKGFWPHAHFRYITERGSENPTQQATEPLDAMETGRGGQ

Transcript Sequence

Transcript ID	Os01t0666000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:27226175:27230292:-1 gene:Os01g0666000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diphosphate phosphatase). (Os01t0666000-01)
Sequence	ATGAATAGAGAGGTGAAAACTGGAGAGAAACTCCCAAGCAACTCCCAAAGTCTCAATCTG CTCAACGGACATGTTCCAATGATTCACTTGTTCGTTATTAATTGTTACATTTTCTTTGTT TATATATACGCACATGTAAGGATGCAGGAAGACGATCGATCAAGGTTCACCTCGGAAAAG AAAAAAGAACAGAAAGAAAGACGATCTAGAGGGAGCCAAAGATTGCAAGATCGATCGCAA GGTAACGTACACGTACAGGTGAGAGGAATCGATGCCGGCCGACGCGCGAGCTGCTCCGCC GTCGTGCCCGTTCCCGACGATACGGTCGCATGGCGCCGCCGTGGCGAGGTCGCACGCCTA CGACTGGCTCGCGCTGCTCCTCCTCGTCGCCGTCGACGGCCTCCTCAACGCCATCGAGCC GTTCCACCGGTTCGTCGGCGCCGGCATGATGACCGATCTCAGATACCCCATGAAGCGCAA CACCGTCCCCATCTGGGCCGTCCCGATCGTCGCTGTCATTGGGCCCATGATTGTCTTCAC CGTCGTCTACTTCAGGAGGAGGAACGTGTACGATCTTCACCATGCTGTGCTAGGCATTCT GTTTTCGGTGCTGATTACCGGCGTGCTCACCGACGCGATCAAGGATGCCGTCGGCCGCCC GAGGCCGAACTTCTTCTGGCGCTGCTTCCCCGACGGAATCGCGGTGTTCGATAACGTCAC CACGGGAGTCATCTGCCACGGCGACGCGAGCGTGATCAAGGAGGGACACAAGAGCTTCCC GAGCGGCCACACTTCATGGTCTTTCGCCGGTCTGGGGTTCCTGTCGTGGTACCTTGCCGG GAAGATCACGGTGTTCGACCGGCGCGGGCACGTCGCCAAGCTGTGCGTCGTCCTCGCGCC TCTGCTCGTTGCGGCGATGGTCGCCATCTCGAGGGTGGACGACTACTGGCACCATTGGCA AGACGTCTGCACGGGAGGCGTCCTTGGATTGGTGGTTGCCTCTGTCTGCTATCTTCAGTT CTTCCCGGCTCCTTCAGATGAGAAAGGGTTCTGGCCTCACGCGCACTTTAGGTACATCAC CGAGAGGGGAAGCGAGAACCCAACGCAGCAAGCCACCGAACCACTGGACGCCATGGAAAC CGGTAGGGGAGGCCAATGAACAAGGTGCAAGCAAGACCAATCTTGTGTATATAAGGCCAT AATGTACAGCTCCTCCTCAAGGCACGGGAGGTAATCGTCGTTAGTTTGTAAATACTTTGG CGTGGGCCAATGGTACCGACTAACTTGACTACTGACCTGACGCAAATAGGTGTTGTTTGT ACATACTGTATGTATTTTCAACGAAGTTTGTACATATGTATTGGTTTTGCTTACTTATGT ACTCCTATGTATTTTAAATAATTTTAGTGTCTAAAATTCCGTTCTTCTCCCAAGAATGGC ACGGGGTCAGATCAAGCTCTGTGTTAAGGCCTGAACTGGCCCATCCTATTTGGGCTTGAA TTCAAGAAATCATTGTGAAAAGAAATAAGTCTATTTTGTGTCCC