Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0662800-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:27055948:27056849:-1 gene:Os01g0662800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 9 description:Zinc finger, NHR/GATA-type domain containing protein. (Os01t0662800-00)
Sequence

ATGCTGCACGAGGCGGCGCCCTGCACGTGCGGGCTGCTCTACGGCAGCTGCGGCGGCGGC
TGCTCGCTGCTGTTCCCGGCGGGGGCGCCGGGGGACCACCACCACCACCACCACTACAAG
CAGTACTGCGGCGCCGGCGACGGGGAGTACCCCGACGTGCCGTACGGCGGCGGCGGCTCG
GTGGACTGCACGCTGTCGCTCGGCACGCCGTCGACCAGGCGCGCCGAGGCCGCGGTAGCG
GGGTTGCCGTGGGATCAGTCGTCTTTGCAGCCCAGCTGCAACGGGCGGCAGGAGATGAGC
GGCGCCGCGGCGCCGCGCACGGAGCCCAGCGGTGGCGCGGGCGCCGCCGCCGCGTCGGCT
CCTCGCCGCTGCGCCAACTGCGACACGACCTCCACGCCGCTCTGGCGGAACGGCCCACGC
GGACCAAAGTCGCTGTGCAACGCGTGTGGCATCCGGTACAAGAAAGAGGAGAGGCGCGCC
GCCGCGGCGGCCGTGGCGCCGACGGCGCTGGCGTCGGACGGCGGGGTGGAGTACGCGTAC
GGGTACCCGCGGCAGCAGCAGCAGTGGGGATGCTATGGGCCGGCCGTGGCAAAGGCGGCG
TCCTTCGGCATGTTCGGTGACGCGGCGGGCGAGGACGGGCCGTGCCTGCCGTGGGGGCTC
GGCGTCATGCCCTCGTCGCCGGCGTTCGGCGCCGTCCGGGAGATGCCAAGCCTGTTCCAG
TACTACTAG

Peptide Sequence

PEP ID

Os01t0662800-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:27055948:27056849:-1 gene:Os01g0662800 transcript:Os01t0662800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 9 description:Zinc finger, NHR/GATA-type domain containing protein. (Os01t0662800-00)
Sequence

MLHEAAPCTCGLLYGSCGGGCSLLFPAGAPGDHHHHHHYKQYCGAGDGEYPDVPYGGGGS
VDCTLSLGTPSTRRAEAAVAGLPWDQSSLQPSCNGRQEMSGAAAPRTEPSGGAGAAAASA
PRRCANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEERRAAAAAVAPTALASDGGVEYAY
GYPRQQQQWGCYGPAVAKAASFGMFGDAAGEDGPCLPWGLGVMPSSPAFGAVREMPSLFQ
YY

Transcript Sequence

Transcript ID

Os01t0662800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:27055948:27056849:-1 gene:Os01g0662800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 9 description:Zinc finger, NHR/GATA-type domain containing protein. (Os01t0662800-00)
Sequence

ATGCTGCACGAGGCGGCGCCCTGCACGTGCGGGCTGCTCTACGGCAGCTGCGGCGGCGGC
TGCTCGCTGCTGTTCCCGGCGGGGGCGCCGGGGGACCACCACCACCACCACCACTACAAG
CAGTACTGCGGCGCCGGCGACGGGGAGTACCCCGACGTGCCGTACGGCGGCGGCGGCTCG
GTGGACTGCACGCTGTCGCTCGGCACGCCGTCGACCAGGCGCGCCGAGGCCGCGGTAGCG
GGGTTGCCGTGGGATCAGTCGTCTTTGCAGCCCAGCTGCAACGGGCGGCAGGAGATGAGC
GGCGCCGCGGCGCCGCGCACGGAGCCCAGCGGTGGCGCGGGCGCCGCCGCCGCGTCGGCT
CCTCGCCGCTGCGCCAACTGCGACACGACCTCCACGCCGCTCTGGCGGAACGGCCCACGC
GGACCAAAGTCGCTGTGCAACGCGTGTGGCATCCGGTACAAGAAAGAGGAGAGGCGCGCC
GCCGCGGCGGCCGTGGCGCCGACGGCGCTGGCGTCGGACGGCGGGGTGGAGTACGCGTAC
GGGTACCCGCGGCAGCAGCAGCAGTGGGGATGCTATGGGCCGGCCGTGGCAAAGGCGGCG
TCCTTCGGCATGTTCGGTGACGCGGCGGGCGAGGACGGGCCGTGCCTGCCGTGGGGGCTC
GGCGTCATGCCCTCGTCGCCGGCGTTCGGCGCCGTCCGGGAGATGCCAAGCCTGTTCCAG
TACTACTAGCTAGGCTACCAG