Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0661500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:27008803:27012114:1 gene:Os01g0661500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mov34/MPN/PAD-1 family protein. (Os01t0661500-01)
Sequence

CCATGGGTGGCAGGAGTGCTAAATGGCAGAGTTGAAATCAATGCAAATAAATGTGGGACG
CATCCAACGCCAAGTAAACCATATTATGTGGATAAAATCGATACCAATGAACAAAAGGTT
GTCCACTATCAAGTTAATTGTAGACCAGCAAGAGATCGCAATACCGGTTCCTACTCTGTG
AAGCACCATTACCCATCTCCTATTGTTTCTTGGATAGAAGACCTTTCGAGCTTCGGCAAT
GTTTCTTTTAGCCAGGATCCTGAATATGCTGATGAGCAATCAAGATCTTCAGTGGGGCAG
TCTTCAGCATCTGTCAATTTGCATGACATGCAGATATCAGTTAGATTGACAGATGAATTC
ATCGAACTTGCAAAGGAGAATACAGGCAACAATGTAGAGACTTGTGGAATCCTAGGTGCT
TCATTTAGAGATGGGACTTACTATGTGACTATGTTGATCATACCAAAGCAAGAAGCAACT
GCTCATTCTTGCCAGGCTGTCAGTGAGGAGGAGATACATGCTATTTTATCGGAGCAATCA
CTTTACCCTGCAGGGTGGATACATACACACCCTTCACAAACGTGTTTCTTATCATCAATT
GATCTGCACACTCAATACTCCTACCAGGTTATGTTACCAGAGGCCGTTGCGATTGTGATT
GCTCCCACTGATCCTACTAGGAACTGTGGAATATTCAGGCTGACAGACCCAGGAGGGATG
GGTGTGCTTAGGGAGTGCAGTGAAAGTGGGTTCCACGCCCACCGGGAGACAACGGACGGC
GGCCCAATCTATGAAACCTGCTCCAAGGTTATATTCAACCCAAATTTGAGGTTCGAGATT
GTTGACCTGCGTTCCGCTCCCTGA

Peptide Sequence

PEP ID

Os01t0661500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:27008803:27012114:1 gene:Os01g0661500 transcript:Os01t0661500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mov34/MPN/PAD-1 family protein. (Os01t0661500-01)
Sequence

PWVAGVLNGRVEINANKCGTHPTPSKPYYVDKIDTNEQKVVHYQVNCRPARDRNTGSYSV
KHHYPSPIVSWIEDLSSFGNVSFSQDPEYADEQSRSSVGQSSASVNLHDMQISVRLTDEF
IELAKENTGNNVETCGILGASFRDGTYYVTMLIIPKQEATAHSCQAVSEEEIHAILSEQS
LYPAGWIHTHPSQTCFLSSIDLHTQYSYQVMLPEAVAIVIAPTDPTRNCGIFRLTDPGGM
GVLRECSESGFHAHRETTDGGPIYETCSKVIFNPNLRFEIVDLRSAP

Transcript Sequence

Transcript ID

Os01t0661500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:27008803:27012114:1 gene:Os01g0661500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mov34/MPN/PAD-1 family protein. (Os01t0661500-01)
Sequence

GTCCTTTGCGCTTGCGGTAAGAACAGCGCGCGCGCGCTCGCCTTTCCCCTCCCTCTCTCT
CCCGCGTCCCTTCTCCAATCCTTGGCCCGAGCGAACTCCAGTGAGGTTGTCCAGCTGCTG
TTCCGGATTTCTCAAGGTCGAAGTCTGGTGCCAAGACCTAGCCATGGGTGGCAGGAGTGC
TAAATGGCAGAGTTGAAATCAATGCAAATAAATGTGGGACGCATCCAACGCCAAGTAAAC
CATATTATGTGGATAAAATCGATACCAATGAACAAAAGGTTGTCCACTATCAAGTTAATT
GTAGACCAGCAAGAGATCGCAATACCGGTTCCTACTCTGTGAAGCACCATTACCCATCTC
CTATTGTTTCTTGGATAGAAGACCTTTCGAGCTTCGGCAATGTTTCTTTTAGCCAGGATC
CTGAATATGCTGATGAGCAATCAAGATCTTCAGTGGGGCAGTCTTCAGCATCTGTCAATT
TGCATGACATGCAGATATCAGTTAGATTGACAGATGAATTCATCGAACTTGCAAAGGAGA
ATACAGGCAACAATGTAGAGACTTGTGGAATCCTAGGTGCTTCATTTAGAGATGGGACTT
ACTATGTGACTATGTTGATCATACCAAAGCAAGAAGCAACTGCTCATTCTTGCCAGGCTG
TCAGTGAGGAGGAGATACATGCTATTTTATCGGAGCAATCACTTTACCCTGCAGGGTGGA
TACATACACACCCTTCACAAACGTGTTTCTTATCATCAATTGATCTGCACACTCAATACT
CCTACCAGGTTATGTTACCAGAGGCCGTTGCGATTGTGATTGCTCCCACTGATCCTACTA
GGAACTGTGGAATATTCAGGCTGACAGACCCAGGAGGGATGGGTGTGCTTAGGGAGTGCA
GTGAAAGTGGGTTCCACGCCCACCGGGAGACAACGGACGGCGGCCCAATCTATGAAACCT
GCTCCAAGGTTATATTCAACCCAAATTTGAGGTTCGAGATTGTTGACCTGCGTTCCGCTC
CCTGAACAATGTAATTCAGCCTCAAACTCTCCATGTACTCCCTGCGTGCTGCCAAAATAT
GCAAGTAAAAAAAAACAAATGCCATAATCGTCCAGGCAATACGGCAATATCTGCTCATCG
TTTGGATGGGTTGGGTGGGTATTACTAATCCATGGTATCAACTGAGCTTTGATGATGGTA
CAGTAATATGGTATTTGTAAGAATGAAGTGTAACTGGGAGAGAGAAGAAAAGCAGTGATG
AATTGTCTTACAACTTCTGGCCTTTGTACCGACACTTCTCTAAAAGAATTAAAGACCAGC
ACTCTTGGT