Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0658500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:26785190:26788557:-1 gene:Os01g0658500 gene_biotype:protein_coding transcript_biotype:protein_coding description:ESCRT-II complex, vps25 subunit domain containing protein. (Os01t0658500-01);Similar to Vacuolar protein sorting protein 25. (Os01t0658500-02)
Sequence	ATGCAGAGGCTGGGGGATTTCAGGCTCCCGCCCTTCTTCAACTACCCGCCTTACTTCACA TTGCAGCCTGTGCGAGAAACACGTGAAAAGCAAGTGCAGCTGTGGAAAGATCTGATACTT GATTATTGTAGAAGTCAAAAGCTATATATAATCTCCCTAGAAGAAGATTTCCCATTGTTC TCCAATCCAAAGATCGAGAGATCTCTTAGCCATGAAGCAAAGGAAGTATTCCTTGCTGCT CTTGTTTATGAAGGACGTGCAGAATGGATGGACAAAGGTCATAAGAAGTGCCTCATTCTT TGGTTGCGGATACAAGATTGGGCTAACTACATATTAAATTTTGTAAAGGATAATGGGCTG GAAGATAGTGTAATGACTGTTGAAGAAATACGTTCAGGAATTGAAACACGTGGGACTGAA CTTGCCGGAATTGACCGTGGTGTTCTCATGAGGGCTTTGAAGTTACTGGAACAGAAGGGC AAAGCAGCGATTTTTAAGGGCACTTCAGCTGATGATGAAGGTGTAAAATTTTCGGCTTAG

Peptide Sequence

PEP ID	Os01t0658500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:26785190:26788557:-1 gene:Os01g0658500 transcript:Os01t0658500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:ESCRT-II complex, vps25 subunit domain containing protein. (Os01t0658500-01);Similar to Vacuolar protein sorting protein 25. (Os01t0658500-02)
Sequence	MQRLGDFRLPPFFNYPPYFTLQPVRETREKQVQLWKDLILDYCRSQKLYIISLEEDFPLF SNPKIERSLSHEAKEVFLAALVYEGRAEWMDKGHKKCLILWLRIQDWANYILNFVKDNGL EDSVMTVEEIRSGIETRGTELAGIDRGVLMRALKLLEQKGKAAIFKGTSADDEGVKFSA

Transcript Sequence

Transcript ID	Os01t0658500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:26785190:26788557:-1 gene:Os01g0658500 gene_biotype:protein_coding transcript_biotype:protein_coding description:ESCRT-II complex, vps25 subunit domain containing protein. (Os01t0658500-01);Similar to Vacuolar protein sorting protein 25. (Os01t0658500-02)
Sequence	CCGTCGCTCGGCGAGCCGCCGGCCCGACGGCGCCGCACGCGCAGGGAGCACTCGACCGGC GCTCGCCTTGGACGAAGGCGCCGGTTAGCCGCGAGGCAGCCGCCCAGCGCTCGCGTTCCC CCCTCCTGATCCGTGGGGTTGCTCAGCGGGGCGCCGTGCCGGAGGAGATGCAGAGGCTGG GGGATTTCAGGCTCCCGCCCTTCTTCAACTACCCGCCTTACTTCACATTGCAGCCTGTGC GAGAAACACGTGAAAAGCAAGTGCAGCTGTGGAAAGATCTGATACTTGATTATTGTAGAA GTCAAAAGCTATATATAATCTCCCTAGAAGAAGATTTCCCATTGTTCTCCAATCCAAAGA TCGAGAGATCTCTTAGCCATGAAGCAAAGGAAGTATTCCTTGCTGCTCTTGTTTATGAAG GACGTGCAGAATGGATGGACAAAGGTCATAAGAAGTGCCTCATTCTTTGGTTGCGGATAC AAGATTGGGCTAACTACATATTAAATTTTGTAAAGGATAATGGGCTGGAAGATAGTGTAA TGACTGTTGAAGAAATACGTTCAGGAATTGAAACACGTGGGACTGAACTTGCCGGAATTG ACCGTGGTGTTCTCATGAGGGCTTTGAAGTTACTGGAACAGAAGGGCAAAGCAGCGATTT TTAAGGGCACTTCAGCTGATGATGAAGGTGTAAAATTTTCGGCTTAGTGTCTGGGGCCTG TGTGGCAGATCAATTATCCTGACCAGCATCTTTGAATGACGAGAATTCTTGCCAACCAGG ACGCTGATCACGTCCTCCCCAAACATATTTATCTGCCTTACTGTTCACTGCTGCTGCTGT TAAATGCCATGTTGGCCTGTCCATCTTTGACTGAAAAAACACTGTAATCAGAACTTAATT CATTTCCACAAGCATACCTACAAAACCCTCCTGTTGTTGTGTGATAAAACTAGGAACTTG TCTTGCATCTCATGCAAATAAATTTTCTATTTAATCAGG