Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0656900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:26717834:26722446:1 gene:Os01g0656900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0656900-01)
Sequence	ATGGCTGCCGCGATGGCCACCGGCGGGCTCGACCCCGCCGCCCGCGAGGCCGAGCTCGCC CACCTCCCGGGCCCCAAGCTCGTCGACCACCTCTGCACCACCCACCGCCGGGCCGACTAC GAGGCAGTCGCGCGGGTGCTCGACGCCCGGGACCGCAGGCTCGAGGCCGCGCTCGCCGAG AACGAGGACCTGCGGAGGAAGTGCGACGCGCTGCTGGTCGGTCAGCGCCGGCCGCGGGAG GAGGAGGAGGAGGAGGCGGCCGGGGAGAAGCCGCCCCCCGGAATCATCGCCGCCCCGGAA CCGGCACGGCGGGACGAGGAGGAAGTCGAGGGGTCGTCAGAGGAAGGGGAGGTTAGAGGC GTCGACTTTATTGACCTCTCCTCCTCCTCCTCCGACGACGAGGAGGAGAAGGAGGTGGAG GCGGGCCGCGGCGCTGGTTCGAGGGTTCCGATCATCAAGGAGGCGCCCGATGACGCGGAG GGGGACGAGGACGACACCTTGCCGCTGAGCCAGCTCTGGAAGAGGCGTCGGCTAGGTGAG CCCGGGGCTGTGAAATCGGAGAAAGGAGATGGGCACAATCCGGTCGATTCTGGGGGGAAT GATCCACCGAAATGTACTTCTGCGAGGACGGATGTTCCGGAAGCATCAACCGGGGAGATG GTGAGTAGGCCTGGGGATTCGATGGTAGCAGCTTTCGTGCAGGGTAAGGGAACAGTGCAA CCGGAGAATGTGGGTGGGGAAATGCCCAGGGTAATGCTGCATTCCCCGGCACAAGTTATC CGGAGCACCTTGCAGAAAAGAAAATTTGGCAAGAAAGATGGTTCATCTGCTATTCCAGGG GACACTACTTCTTCCCAAGCAAGAAGTACAAGCCTTGCACCCAAGAGAGAAGGTTCAGCT GCTGTTCCAGGGTACACTACGTCTTCCCAAGCAAGAAATACAGGCCTTTCACCCAAGAAA TGCAGGGATTCAACGAGCCCAGATGATGAAATGTGCAATGCACTTGCTGATTCTGTACAG GTTGGAGCTGGTAGCACGATGCCGAGGGGTCCCGGTGAGCAAGACAAAGGAATTGGTGCA GTGCAAAGGGCAACGGTGCTGCATGGGACTAGTGGAATTGGGGAGCAAGGCGGTAAGCTT GATTCTACTCCGACTAAAGTTAGGGAATCGAACAGGAGAGAGGGAGGACTGCAGAACAAA TCAATCGATTCGAAGTCAAATGATGCGCTGAAACACCAGGATAAAAAAGATGGTAGAATG GTACAGAAAGGGGATCTCTCAGTGCAGTCATGTGTGCCTGCTAGGCCAATAGTTGCTAGT GTTCCTTCGGTAACTAAAAATTCTGAAAAGGGAAACAGTGAAAAGGGAGTTAGTCAACCA CCAAAGGGAAATGACCAAATGAACAAGATGTCAATGGTGGAATCATCATCCAAATGTGGG TATGAGAAAGTCGGGGCTGATGTGCAGAAGTGCTCACCTCTACCAAGACAAAGTGAAGAA GGAAGTGTAGCAAGGGGAGTAGTTTCATTTGAAGAGACTGGAATAGCAACAGTTCATCCT CTGAGCATTCGCAATCTGTCAGGACCAGAACTTCGAAACTTAAACAAAGGAGGTGGTGAA TTGTCAAAGAAATTGGTGGTTGAAGGGTCACCAAAATATGGAGAAAAGAATAATGATGCT CGTTCAGAGAAAAACTCATCTCCATTAGGACAGAGTGAAGATGTCAAGATCATTCGTGAA GGGGCTTCAAATGAAGAGCCAAGGGTGGGAAGATTGTCTCCTTCGATCCTAAGCAACTAC TCAACAGGTGAACAAATTCATTCAGTGAGTAAGAATGCTGAATTATGCAGTCCGACAGCC AAAAAAGCTTTGTTTGAACCTGGATCTTCATGTACGCCTTTAAAGCACACGGTTTGTCCA CCTTCCAGTGGTAAAAGCATCTCTATCCAGGCAAAAGGGGAAATAAATTTGTTACCTTCA GCTATGTCAAGGCACTGGGAAACCGCTGCACACATGATTGCCTCACTTAGGGGAAACATG GAGCTCTCTATGCAAGCTCTCTGTGCTCTTTACCGCCAAAGGAAGTTAGTAATCATGTCA ACTGAAGGACAACAAACTGGGACTACTGGACTCACCAAAATTGATGCCGTCAGGGCAATT AGGTTGTTAGAATTTCTTTTGGACGGTAAGCTTAAAGGGCCTCTGAAAAGAACTGCCAAG GAACTACTAAGCCATGATGCTACAGGGCCCACTTTCCTGGAGAAAGTAGCACTAAGTTTC TCCAAAGAACTGTTCGATATTTACAAGAACAAGAAGGATCCGTACTTCTGTTGA

Peptide Sequence

PEP ID	Os01t0656900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:26717834:26722446:1 gene:Os01g0656900 transcript:Os01t0656900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0656900-01)
Sequence	MAAAMATGGLDPAAREAELAHLPGPKLVDHLCTTHRRADYEAVARVLDARDRRLEAALAE NEDLRRKCDALLVGQRRPREEEEEEAAGEKPPPGIIAAPEPARRDEEEVEGSSEEGEVRG VDFIDLSSSSSDDEEEKEVEAGRGAGSRVPIIKEAPDDAEGDEDDTLPLSQLWKRRRLGE PGAVKSEKGDGHNPVDSGGNDPPKCTSARTDVPEASTGEMVSRPGDSMVAAFVQGKGTVQ PENVGGEMPRVMLHSPAQVIRSTLQKRKFGKKDGSSAIPGDTTSSQARSTSLAPKREGSA AVPGYTTSSQARNTGLSPKKCRDSTSPDDEMCNALADSVQVGAGSTMPRGPGEQDKGIGA VQRATVLHGTSGIGEQGGKLDSTPTKVRESNRREGGLQNKSIDSKSNDALKHQDKKDGRM VQKGDLSVQSCVPARPIVASVPSVTKNSEKGNSEKGVSQPPKGNDQMNKMSMVESSSKCG YEKVGADVQKCSPLPRQSEEGSVARGVVSFEETGIATVHPLSIRNLSGPELRNLNKGGGE LSKKLVVEGSPKYGEKNNDARSEKNSSPLGQSEDVKIIREGASNEEPRVGRLSPSILSNY STGEQIHSVSKNAELCSPTAKKALFEPGSSCTPLKHTVCPPSSGKSISIQAKGEINLLPS AMSRHWETAAHMIASLRGNMELSMQALCALYRQRKLVIMSTEGQQTGTTGLTKIDAVRAI RLLEFLLDGKLKGPLKRTAKELLSHDATGPTFLEKVALSFSKELFDIYKNKKDPYFC

Transcript Sequence

Transcript ID	Os01t0656900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:26717834:26722446:1 gene:Os01g0656900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0656900-01)
Sequence	GATTTCTCCCAAACCAAAACCAACCAAACCTCGCGGGCGGCCGCCTAGGGCTTATGGCTG CCGCGATGGCCACCGGCGGGCTCGACCCCGCCGCCCGCGAGGCCGAGCTCGCCCACCTCC CGGGCCCCAAGCTCGTCGACCACCTCTGCACCACCCACCGCCGGGCCGACTACGAGGCAG TCGCGCGGGTGCTCGACGCCCGGGACCGCAGGCTCGAGGCCGCGCTCGCCGAGAACGAGG ACCTGCGGAGGAAGTGCGACGCGCTGCTGGTCGGTCAGCGCCGGCCGCGGGAGGAGGAGG AGGAGGAGGCGGCCGGGGAGAAGCCGCCCCCCGGAATCATCGCCGCCCCGGAACCGGCAC GGCGGGACGAGGAGGAAGTCGAGGGGTCGTCAGAGGAAGGGGAGGTTAGAGGCGTCGACT TTATTGACCTCTCCTCCTCCTCCTCCGACGACGAGGAGGAGAAGGAGGTGGAGGCGGGCC GCGGCGCTGGTTCGAGGGTTCCGATCATCAAGGAGGCGCCCGATGACGCGGAGGGGGACG AGGACGACACCTTGCCGCTGAGCCAGCTCTGGAAGAGGCGTCGGCTAGGTGAGCCCGGGG CTGTGAAATCGGAGAAAGGAGATGGGCACAATCCGGTCGATTCTGGGGGGAATGATCCAC CGAAATGTACTTCTGCGAGGACGGATGTTCCGGAAGCATCAACCGGGGAGATGGTGAGTA GGCCTGGGGATTCGATGGTAGCAGCTTTCGTGCAGGGTAAGGGAACAGTGCAACCGGAGA ATGTGGGTGGGGAAATGCCCAGGGTAATGCTGCATTCCCCGGCACAAGTTATCCGGAGCA CCTTGCAGAAAAGAAAATTTGGCAAGAAAGATGGTTCATCTGCTATTCCAGGGGACACTA CTTCTTCCCAAGCAAGAAGTACAAGCCTTGCACCCAAGAGAGAAGGTTCAGCTGCTGTTC CAGGGTACACTACGTCTTCCCAAGCAAGAAATACAGGCCTTTCACCCAAGAAATGCAGGG ATTCAACGAGCCCAGATGATGAAATGTGCAATGCACTTGCTGATTCTGTACAGGTTGGAG CTGGTAGCACGATGCCGAGGGGTCCCGGTGAGCAAGACAAAGGAATTGGTGCAGTGCAAA GGGCAACGGTGCTGCATGGGACTAGTGGAATTGGGGAGCAAGGCGGTAAGCTTGATTCTA CTCCGACTAAAGTTAGGGAATCGAACAGGAGAGAGGGAGGACTGCAGAACAAATCAATCG ATTCGAAGTCAAATGATGCGCTGAAACACCAGGATAAAAAAGATGGTAGAATGGTACAGA AAGGGGATCTCTCAGTGCAGTCATGTGTGCCTGCTAGGCCAATAGTTGCTAGTGTTCCTT CGGTAACTAAAAATTCTGAAAAGGGAAACAGTGAAAAGGGAGTTAGTCAACCACCAAAGG GAAATGACCAAATGAACAAGATGTCAATGGTGGAATCATCATCCAAATGTGGGTATGAGA AAGTCGGGGCTGATGTGCAGAAGTGCTCACCTCTACCAAGACAAAGTGAAGAAGGAAGTG TAGCAAGGGGAGTAGTTTCATTTGAAGAGACTGGAATAGCAACAGTTCATCCTCTGAGCA TTCGCAATCTGTCAGGACCAGAACTTCGAAACTTAAACAAAGGAGGTGGTGAATTGTCAA AGAAATTGGTGGTTGAAGGGTCACCAAAATATGGAGAAAAGAATAATGATGCTCGTTCAG AGAAAAACTCATCTCCATTAGGACAGAGTGAAGATGTCAAGATCATTCGTGAAGGGGCTT CAAATGAAGAGCCAAGGGTGGGAAGATTGTCTCCTTCGATCCTAAGCAACTACTCAACAG GTGAACAAATTCATTCAGTGAGTAAGAATGCTGAATTATGCAGTCCGACAGCCAAAAAAG CTTTGTTTGAACCTGGATCTTCATGTACGCCTTTAAAGCACACGGTTTGTCCACCTTCCA GTGGTAAAAGCATCTCTATCCAGGCAAAAGGGGAAATAAATTTGTTACCTTCAGCTATGT CAAGGCACTGGGAAACCGCTGCACACATGATTGCCTCACTTAGGGGAAACATGGAGCTCT CTATGCAAGCTCTCTGTGCTCTTTACCGCCAAAGGAAGTTAGTAATCATGTCAACTGAAG GACAACAAACTGGGACTACTGGACTCACCAAAATTGATGCCGTCAGGGCAATTAGGTTGT TAGAATTTCTTTTGGACGGTAAGCTTAAAGGGCCTCTGAAAAGAACTGCCAAGGAACTAC TAAGCCATGATGCTACAGGGCCCACTTTCCTGGAGAAAGTAGCACTAAGTTTCTCCAAAG AACTGTTCGATATTTACAAGAACAAGAAGGATCCGTACTTCTGTTGACAGCAAGGAAGCG ATACGTGGTTTAACATTCAGATATCCATAACTTGTCATATAGTAGGGTCACTATAGTTTG TTGTCATGAACAGCTGCTGCTGAAATTAGCAGTTTACTCACCTTCCCTGACTACAACAAT TAGCAGTCTAGGTCCTCCGTCCGTGAACCATGGTTTCAGCTAATAGTCATGAAGCTTGGT CGTGGTGGGCAACTATTCTATGCATTTAAACCCGCCAGCCCGGCGAAAAAAAATTCTATA CATTTAAATACGAAATATTGAAGAGACATCGGAAGCACTACAAGAGTTTGAAGCTCCAGT GCCTTCCACTGTTTTAAGATGTTGATGCTGCAAAGTATAGCACCTCTTGTGTTGCATAGT TTTGTGACTGCACAGAGCCTCCATCCAGTAGATCCCATTTTGTGAGTTCGAGTTCTTGAG ACATCATGTAATGCAGGGGTCAATTGATGGATGCAGATATCTCTTGCAAAGTTTTTGAAT TGATC