Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0654500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:26533072:26537108:-1 gene:Os01g0654500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NADP-isocitrate dehydrogenase. (Os01t0654500-01)
Sequence	ATGGCGTTCGAGAAGATCAAGGTCGCCAACCCCATCGTCGAGATGGACGGTGATGAGATG ACCAGGATATTCTGGCAGTCTATCAAGGACAAGCTTATCTTTCCATTTTTGGATCTGGAC ATTAAGTACTATGACTTGGGAGTTCTCCACCGTGATGCAACTGATGACAAGGTCACCGTG GAGGCTGCAGAGGCTACTCTCAAGTACAATGTGGCTATTAAGTGTGCGACGATTACTCCA GATGAGGCTCGGGTTAAGGAGTTCAACCTAAAGCAAATGTGGAAGAGCCCCAATGGCACA ATTAGGAATATTATCAATGGCACTGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCA AGGCTTGTTCCAGGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAG TACCGAGCAACTGATGCAGTTCTGAAGGGGCCTGGCAAGCTCAAGCTGGTTTTTGAGGGA AAGGATGAGCAGATTGATCTGGAGGTGTTCAACTTCACTGGTGCTGGAGGAGTTGCTTTG TCTATGTACAACACTGATGAGTCAATCCGAGCTTTTGCTGAAGCTTCTATGACAACTGCT TATGAGAAGAAATGGCCGCTTTATCTTAGCACCAAAAACACAATCCTGAAGAAATATGAT GGAAGGTTCAAGGATATTTTCCAGGAGGTCTATGAAGCTGGGTGGAAATCCAAGTTTGAG GCTGCCGGAATATGGTATGAGCATCGTCTCATCGATGACATGGTTGCTTATGCACTTAAG AGTGAAGGGGGCTATGTGTGGGCTTGCAAGAATTACGATGGAGATGTGCAGAGTGATTTC TTAGCTCAAGGCTTTGGTTCATTGGGTTTGATGACATCAGTATTGGTGTGCCCTGATGGA AAAACAATTGAAGCTGAAGCTGCCCATGGCACGGTTACCCGTCATTTCCGTGTTCACCAG AAGGGAGGTGAAACCAGCACAAACAGCATTGCTTCAATCTTTGCTTGGACCAGAGGACTT GCACACAGGGCAAAGCTTGACGACAATGCTAGACTTCTTGACTTTGCACTAAAACTTGAA GCTGCTTGCGTTGGAACCGTGGAATCTGGGAAGATGACCAAAGACCTTGCTCTTCTTATT CACGGGTCTTCAAACGTCACAAGAAGCCATTACCTGAACACTGAAGAGTTCATTGATGCG GTTGCTGCGGAGCTCCGGTCAAGACTGGCAGCCAACTGA

Peptide Sequence

PEP ID	Os01t0654500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:26533072:26537108:-1 gene:Os01g0654500 transcript:Os01t0654500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NADP-isocitrate dehydrogenase. (Os01t0654500-01)
Sequence	MAFEKIKVANPIVEMDGDEMTRIFWQSIKDKLIFPFLDLDIKYYDLGVLHRDATDDKVTV EAAEATLKYNVAIKCATITPDEARVKEFNLKQMWKSPNGTIRNIINGTVFREPIICKNVP RLVPGWTKPICIGRHAFGDQYRATDAVLKGPGKLKLVFEGKDEQIDLEVFNFTGAGGVAL SMYNTDESIRAFAEASMTTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSKFE AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDG KTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLDFALKLE AACVGTVESGKMTKDLALLIHGSSNVTRSHYLNTEEFIDAVAAELRSRLAAN

Transcript Sequence

Transcript ID	Os01t0654500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:26533072:26537108:-1 gene:Os01g0654500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NADP-isocitrate dehydrogenase. (Os01t0654500-01)
Sequence	ACATCCTCCTCCGCCGCCGGCTGCTTCCCACCGGCTCCCGATCTCCGAGGCAAGCAGCGC CGCACCCGGCCGCTGCCGCCGCCGCCATGGCGTTCGAGAAGATCAAGGTCGCCAACCCCA TCGTCGAGATGGACGGTGATGAGATGACCAGGATATTCTGGCAGTCTATCAAGGACAAGC TTATCTTTCCATTTTTGGATCTGGACATTAAGTACTATGACTTGGGAGTTCTCCACCGTG ATGCAACTGATGACAAGGTCACCGTGGAGGCTGCAGAGGCTACTCTCAAGTACAATGTGG CTATTAAGTGTGCGACGATTACTCCAGATGAGGCTCGGGTTAAGGAGTTCAACCTAAAGC AAATGTGGAAGAGCCCCAATGGCACAATTAGGAATATTATCAATGGCACTGTATTCAGAG AGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGGATGGACTAAGCCCATTTGCA TTGGAAGGCATGCTTTTGGTGATCAGTACCGAGCAACTGATGCAGTTCTGAAGGGGCCTG GCAAGCTCAAGCTGGTTTTTGAGGGAAAGGATGAGCAGATTGATCTGGAGGTGTTCAACT TCACTGGTGCTGGAGGAGTTGCTTTGTCTATGTACAACACTGATGAGTCAATCCGAGCTT TTGCTGAAGCTTCTATGACAACTGCTTATGAGAAGAAATGGCCGCTTTATCTTAGCACCA AAAACACAATCCTGAAGAAATATGATGGAAGGTTCAAGGATATTTTCCAGGAGGTCTATG AAGCTGGGTGGAAATCCAAGTTTGAGGCTGCCGGAATATGGTATGAGCATCGTCTCATCG ATGACATGGTTGCTTATGCACTTAAGAGTGAAGGGGGCTATGTGTGGGCTTGCAAGAATT ACGATGGAGATGTGCAGAGTGATTTCTTAGCTCAAGGCTTTGGTTCATTGGGTTTGATGA CATCAGTATTGGTGTGCCCTGATGGAAAAACAATTGAAGCTGAAGCTGCCCATGGCACGG TTACCCGTCATTTCCGTGTTCACCAGAAGGGAGGTGAAACCAGCACAAACAGCATTGCTT CAATCTTTGCTTGGACCAGAGGACTTGCACACAGGGCAAAGCTTGACGACAATGCTAGAC TTCTTGACTTTGCACTAAAACTTGAAGCTGCTTGCGTTGGAACCGTGGAATCTGGGAAGA TGACCAAAGACCTTGCTCTTCTTATTCACGGGTCTTCAAACGTCACAAGAAGCCATTACC TGAACACTGAAGAGTTCATTGATGCGGTTGCTGCGGAGCTCCGGTCAAGACTGGCAGCCA ACTGAGCTTTTTACAAGATACTCTTGCCAACTTCAGTGCTTCATTTCCCTTCTTTTAAAG TCATTTTGGCTGTATCACCATTACCATTCGAGTTCTCATTCTGGACTGAATGAACATTTA CAGCATCGGTACAAATTGTTGTCGATCCAAGCAGTCCATAGATGCTGATATCACGTAGAC GGGACCTCCCAAATAAAGGATATATAGAACAATCTGTCATTGCTGATAGTTGTTTTATCC CTATCAGTTAGCGTCCGACTGGAAAATTATCTATGTTCCTCATTTGGATGGTTTGATAAT TTCTTGATTGATAATTCGTACCTTGGAATCTGGGCTGAAGGAAGCATGGTGCACAATTCG AAGTTT