Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0654100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:26514543:26521761:1 gene:Os01g0654100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP synthetase). (Os01t0654100-01);CTP synthase domain containing protein. (Os01t0654100-02);Similar to CTP synthase. (Os01t0654100-03)
Sequence	ATGAAGTACGTGCTGGTGACAGGAGGGGTGGTGAGCGGCCTCGGCAAGGGCGTGACCGCG AGCAGCATCGGCGTCGTGCTCAAGGCCTGCGGGCTCCGCGTCACCACCATCAAGATTGAC CCATACCTCAACACTGATGCTGGAACCATGTCTCCGTTCGAGCATGGTGAGGTCTTCGTT TTGGACGATGGTGGAGAGGTGGACTTGGACCTTGGAAATTACGAACGTTTTCTGGACATC AAATTGACCCGTGATAACAACATAACCACGGGAAAAATATATCAGTCAGTCATTAACAAA GAAAGGAGAGGAGACTACTTGGGGAAAACCATTCAGGTTGTGCCACATATTACAGATGAA ATTCAAGATTGGATTGAACGTGTAGCGATGAATCCGGTCGATGGTAAAGAAGGACCTCCT GATGTTTGTGTCATAGAACTTGGTGGCACCATAGGGGATATTGAATCAATGCCCTTTATT GAAGCATTAGGTCAATTTTCCTACCGTGTTGGACCTGGAAACTTCTGTCTGGTCCATGTC AGTCTTGTTCCAGTTTTAAATGTAGTTGGTGAACAGAAAACTAAACCTACCCAGCATAGT GTTCGTGGGCTAAGAGGCCTTGGATTGGCACCTGACATTTTAGCATGTCGCAGTACCGAG CCACTGGAAGAAAACGTGAAAGCAAAGCTCTCACAATTTTGTCACGTTCCAGTCTCAAGT ATTATTAATCTCCATGACGTTACAAACATTTGGCACATCCCCTTGTTGCTAAGGGACCAA AGGGCCCATGAAGCTATTCTGAAAGTTCTAGACCTTCAATTTGTCGGTAAAGTACCACGA GAACCCAAGTTGGTTGAATGGACCGAAAGAGCCAGCAAGTTTGACAAGTTGAAGGCTACG GTTAAGATTGCGATGGTTGGAAAATATACTGGGCTGTCCGATTCCTACCTGTCTGTTCTA AAGGCACTTTTGCATGCATCGGTTGCTATGGGAAGAAAGCTTGTAGTGGAGTGGGTTCCT TCCTGTGATCTTGAAGATTCTGCAGCCAAAGAGACCCCTGAAGCCCATAAAAAAGCATGG AAGCTACTCAAGGGTGCAGAGGGTATACTTGTCCCTGGAGGCTTTGGAGATAGAGGTGTT CAGGGAAAAATTCTTGCTGCAAAATATGCACGAGAAAATAATGTTCCTTATCTCGGCATT TGCTTGGGTATGCAAATTGCAGTGATTGATTTTGCCTGTTCTATCATGAAATTACCGGGT GCAAATAGCACAGAGTTTGACCCAGATACAATGTCACCCTGCGTCATTTTCATGCCAGAG GGTTCCAAAACCCATATGGGGGCAACTATGCGGCTTGGATCAAGGAGAACATATTTCCAT GCCACTGCATGCAAATCTGCAAAGCTGTATGGTAATGCTAGATTCGTAGACGAAAGACAT CGACACAGATATGAGGTAAATCCTGAAATGGTACCAGAGTTTGAGAAGGCCGGACTTTCA TTTGTTGGCAAGGATGAGAGTGGAAGACGCATGGAGATTATTGAACTACCCAGTCATAAA TTTTTCATTGGAGTACAGTTCCATCCTGAATTCAAGTCAAGACCAGGGAAGCCATCTCCA CTTTTCTTAGGATTAATAGCAGCAGCATCTGGACAACTAGAAACTTTGCTCCAACCAAGT TCCAACATTGTCAATCCAAATCCTATGCCCAGATTTCCCATTCCCAAAAAGACGATTTAC CATGCCAAGAAGCCACTGGACAGCTTGGTAAACGGATACTTTGCAAATGGCAACGTCATC CACACTTGA

Peptide Sequence

PEP ID	Os01t0654100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:26514543:26521761:1 gene:Os01g0654100 transcript:Os01t0654100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP synthetase). (Os01t0654100-01);CTP synthase domain containing protein. (Os01t0654100-02);Similar to CTP synthase. (Os01t0654100-03)
Sequence	MKYVLVTGGVVSGLGKGVTASSIGVVLKACGLRVTTIKIDPYLNTDAGTMSPFEHGEVFV LDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVINKERRGDYLGKTIQVVPHITDE IQDWIERVAMNPVDGKEGPPDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHV SLVPVLNVVGEQKTKPTQHSVRGLRGLGLAPDILACRSTEPLEENVKAKLSQFCHVPVSS IINLHDVTNIWHIPLLLRDQRAHEAILKVLDLQFVGKVPREPKLVEWTERASKFDKLKAT VKIAMVGKYTGLSDSYLSVLKALLHASVAMGRKLVVEWVPSCDLEDSAAKETPEAHKKAW KLLKGAEGILVPGGFGDRGVQGKILAAKYARENNVPYLGICLGMQIAVIDFACSIMKLPG ANSTEFDPDTMSPCVIFMPEGSKTHMGATMRLGSRRTYFHATACKSAKLYGNARFVDERH RHRYEVNPEMVPEFEKAGLSFVGKDESGRRMEIIELPSHKFFIGVQFHPEFKSRPGKPSP LFLGLIAAASGQLETLLQPSSNIVNPNPMPRFPIPKKTIYHAKKPLDSLVNGYFANGNVI HT

Transcript Sequence

Transcript ID	Os01t0654100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:26514543:26521761:1 gene:Os01g0654100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP synthetase). (Os01t0654100-01);CTP synthase domain containing protein. (Os01t0654100-02);Similar to CTP synthase. (Os01t0654100-03)
Sequence	ACATCCCCATTGCAGAACCTCTCTCCCTTCTTGGTTCTTCTTCTCATCTCCTCCCACTCC AGCTCTGCCCCTGAGCCAAGAACTGAGCAGCAGAGAGCTCGTGGTCTCTTTGCCAGCTTC TCCTCAGTCCTCACCAAGCTGTTCTTGCAGAGAAAACATAGCCAAAGAGCTAATTTGAGC TCCCACCATGAAGTACGTGCTGGTGACAGGAGGGGTGGTGAGCGGCCTCGGCAAGGGCGT GACCGCGAGCAGCATCGGCGTCGTGCTCAAGGCCTGCGGGCTCCGCGTCACCACCATCAA GATTGACCCATACCTCAACACTGATGCTGGAACCATGTCTCCGTTCGAGCATGGTGAGGT CTTCGTTTTGGACGATGGTGGAGAGGTGGACTTGGACCTTGGAAATTACGAACGTTTTCT GGACATCAAATTGACCCGTGATAACAACATAACCACGGGAAAAATATATCAGTCAGTCAT TAACAAAGAAAGGAGAGGAGACTACTTGGGGAAAACCATTCAGGTTGTGCCACATATTAC AGATGAAATTCAAGATTGGATTGAACGTGTAGCGATGAATCCGGTCGATGGTAAAGAAGG ACCTCCTGATGTTTGTGTCATAGAACTTGGTGGCACCATAGGGGATATTGAATCAATGCC CTTTATTGAAGCATTAGGTCAATTTTCCTACCGTGTTGGACCTGGAAACTTCTGTCTGGT CCATGTCAGTCTTGTTCCAGTTTTAAATGTAGTTGGTGAACAGAAAACTAAACCTACCCA GCATAGTGTTCGTGGGCTAAGAGGCCTTGGATTGGCACCTGACATTTTAGCATGTCGCAG TACCGAGCCACTGGAAGAAAACGTGAAAGCAAAGCTCTCACAATTTTGTCACGTTCCAGT CTCAAGTATTATTAATCTCCATGACGTTACAAACATTTGGCACATCCCCTTGTTGCTAAG GGACCAAAGGGCCCATGAAGCTATTCTGAAAGTTCTAGACCTTCAATTTGTCGGTAAAGT ACCACGAGAACCCAAGTTGGTTGAATGGACCGAAAGAGCCAGCAAGTTTGACAAGTTGAA GGCTACGGTTAAGATTGCGATGGTTGGAAAATATACTGGGCTGTCCGATTCCTACCTGTC TGTTCTAAAGGCACTTTTGCATGCATCGGTTGCTATGGGAAGAAAGCTTGTAGTGGAGTG GGTTCCTTCCTGTGATCTTGAAGATTCTGCAGCCAAAGAGACCCCTGAAGCCCATAAAAA AGCATGGAAGCTACTCAAGGGTGCAGAGGGTATACTTGTCCCTGGAGGCTTTGGAGATAG AGGTGTTCAGGGAAAAATTCTTGCTGCAAAATATGCACGAGAAAATAATGTTCCTTATCT CGGCATTTGCTTGGGTATGCAAATTGCAGTGATTGATTTTGCCTGTTCTATCATGAAATT ACCGGGTGCAAATAGCACAGAGTTTGACCCAGATACAATGTCACCCTGCGTCATTTTCAT GCCAGAGGGTTCCAAAACCCATATGGGGGCAACTATGCGGCTTGGATCAAGGAGAACATA TTTCCATGCCACTGCATGCAAATCTGCAAAGCTGTATGGTAATGCTAGATTCGTAGACGA AAGACATCGACACAGATATGAGGTAAATCCTGAAATGGTACCAGAGTTTGAGAAGGCCGG ACTTTCATTTGTTGGCAAGGATGAGAGTGGAAGACGCATGGAGATTATTGAACTACCCAG TCATAAATTTTTCATTGGAGTACAGTTCCATCCTGAATTCAAGTCAAGACCAGGGAAGCC ATCTCCACTTTTCTTAGGATTAATAGCAGCAGCATCTGGACAACTAGAAACTTTGCTCCA ACCAAGTTCCAACATTGTCAATCCAAATCCTATGCCCAGATTTCCCATTCCCAAAAAGAC GATTTACCATGCCAAGAAGCCACTGGACAGCTTGGTAAACGGATACTTTGCAAATGGCAA CGTCATCCACACTTGATTAGCAGTTGTGCAAATCCTAAGCGAGGCCTTGTTTGAGATTTG TTTCTACGGTTTTCTGCTTGAACCCTAATCTTTTCTTCTTCTTCGTTTTCGTGTTTTTTT TTTGGCTTTGTATTTGTCTCTGCTCAACTGAGAAGGCTAAGAGTTGCAAGCTCCAGATAC ACGGTTCCCATGTTTTAAGAGGAAACGTCCTCCGGTCATGTTGAAGCAAAGTTTAGCTAT AGGGTGGTGTAGTGTGCTGTTTATTTCCTGCTGAGGCCTCAATTAAGGCTGGAAATGTAT TGGTAGCTTTAGTATAGCCTGGCATCTCAACTATTTGTACATTGGGAAAAAAACCTACCT AAGTACTGAATATACAAATGCTTGGCCAAGATTGCTTACTTCAATGAAGAGTTGGGCATC TCTGTATCCTTTTCTTTTAACAGCAGGCGATCTGAGACATGAATATGCT