Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0648700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:26173196:26177230:-1 gene:Os01g0648700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bromodomain containing protein. (Os01t0648700-01)
Sequence

ATGCCTCGCCCAAAGCGCCGCCGGTCGCCCTTGCCGCCGCCGGCGCCGCCTGGCTTCCCC
ACGGAGCGGAAACACCATCTGCCGGAGCTGCAGCCTCCAGCGGTGGCCGCGGCGTCTCCT
GGCGTCGCTGGAGTTCCCGCCGATCTTGGCGACGCGCTCCTGCGCTGCGGCAAGCTCCTG
GACAAGCTCCTGGAGCACGAGGACGGGTGGGTCTTCGCCGAGCCGGTGGACGCGCGCGCC
CTCCGCCTCGTCGACTACTACCTGCGCATCTCCGACCCCATGGACCTCGGCACCGTCCGC
CGCCGCCTCGAGCGCCGCCGCTACGCGGACCCGTGGGCGTTCGCCGCCGACGTCCGGCTC
ACCTTCAACAACGCCATGTCCTACAACAGCGCGGGCGACCCCGTGTACGAGAGCGCCGCC
GAGCTCTCCGAAATCTTCGAGGCCGGGTGGCCCTCCGTTCTCGCGGCGCCACCGCGCCCG
CCCGACGCCGAGCGCAAGCGGAGGCTCAGTGGTTTGCTCCCGCGGCTGCCGGTGGGTGCA
CAGGTGACGGTGGCCGAGATCATGAAGAAGCGGGACGGGTGCCTGCGGGAGGTGAACGGG
ATGATGGAGGTGGACCTGGACAGGGCGGACTCCGCGACGCTGGACGAGCTCGACCGGATG
GTCGCGGAGCACGGGGCCGCCCTCGCCGGCGTGGTTAAGGTGAAGCAGGAGCCATGA

Peptide Sequence

PEP ID

Os01t0648700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:26173196:26177230:-1 gene:Os01g0648700 transcript:Os01t0648700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bromodomain containing protein. (Os01t0648700-01)
Sequence

MPRPKRRRSPLPPPAPPGFPTERKHHLPELQPPAVAAASPGVAGVPADLGDALLRCGKLL
DKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPWAFAADVRL
TFNNAMSYNSAGDPVYESAAELSEIFEAGWPSVLAAPPRPPDAERKRRLSGLLPRLPVGA
QVTVAEIMKKRDGCLREVNGMMEVDLDRADSATLDELDRMVAEHGAALAGVVKVKQEP

Transcript Sequence

Transcript ID

Os01t0648700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:26173196:26177230:-1 gene:Os01g0648700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bromodomain containing protein. (Os01t0648700-01)
Sequence

AAAGCCCCACACACTCCTCGTTCTCCAGCCACCTCCAGCCCTACTATGCCTCGCCCAAAG
CGCCGCCGGTCGCCCTTGCCGCCGCCGGCGCCGCCTGGCTTCCCCACGGAGCGGAAACAC
CATCTGCCGGAGCTGCAGCCTCCAGCGGTGGCCGCGGCGTCTCCTGGCGTCGCTGGAGTT
CCCGCCGATCTTGGCGACGCGCTCCTGCGCTGCGGCAAGCTCCTGGACAAGCTCCTGGAG
CACGAGGACGGGTGGGTCTTCGCCGAGCCGGTGGACGCGCGCGCCCTCCGCCTCGTCGAC
TACTACCTGCGCATCTCCGACCCCATGGACCTCGGCACCGTCCGCCGCCGCCTCGAGCGC
CGCCGCTACGCGGACCCGTGGGCGTTCGCCGCCGACGTCCGGCTCACCTTCAACAACGCC
ATGTCCTACAACAGCGCGGGCGACCCCGTGTACGAGAGCGCCGCCGAGCTCTCCGAAATC
TTCGAGGCCGGGTGGCCCTCCGTTCTCGCGGCGCCACCGCGCCCGCCCGACGCCGAGCGC
AAGCGGAGGCTCAGTGGTTTGCTCCCGCGGCTGCCGGTGGGTGCACAGGTGACGGTGGCC
GAGATCATGAAGAAGCGGGACGGGTGCCTGCGGGAGGTGAACGGGATGATGGAGGTGGAC
CTGGACAGGGCGGACTCCGCGACGCTGGACGAGCTCGACCGGATGGTCGCGGAGCACGGG
GCCGCCCTCGCCGGCGTGGTTAAGGTGAAGCAGGAGCCATGAGTGGTGGATAATCAAATT
TCAGAAGGTCCTGCAAGATTCTACCTCAGTGTCCCTTTTTTGTCGAGGTTCCTGCTCTGT
GAACTGCTGATATATCTTTGTTTCAGAATGCTGTTGGCTTCAACAGGACTTCGTGAGACC
ATGAGTCCATAACACCGTAGTTATCATATCCTAGATATGTCAACTTTGCATTTTGTCAGA
TGTCATACCGTTGTGTTTGTAAGTTGGAACAAGCGGGGGTTGTATGTTGGGATCAGGGTT
TTCTGATACTGAAACGTTTGGTGAACTAGAAGGGGAAAATATGCAAAAATATGCAGTGCA
AACTCTTATGTAGTGTAAAACTGAAAACTATTATATGATACATAATATATGTCTGAAATG
TCTATGTT