Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0645400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:25994669:25996837:1 gene:Os01g0645400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YUCCA-LIKE GENE 1 description:Flavin monooxygenase-like enzyme , Auxin biosynthesis (Os01t0645400-01);Flavin monooxygenase-like enzyme , Auxin biosynthesis (Os01t0645400-02)
Sequence	ATGGACAACAAGCCGGCGCAAGAACGCCGCGAGACGTGGGTCCCGGGCGCCGTCATCGTC GGCGCGGGCCCGTCGGGGCTCGCCGCGGCGGCGTGCCTCGCGGCGCGGGGCGTTCCGGCG ACGGTGCTTGAGCGGTCCGACTCGCTGGCGTCCACGTGGCGCCACCGCATGTACGACCGC CTCGCTCTCCACCTGCCCAAGCGCTTCTGCGAGCTGCCGCTCCTCCCGTTCCCGGAGGAG TACCCGACGTACCCGTCCAAGGACCAGTTCGTGGCGTACATGGAGGCGTACGCCGCGGCG GCGGGCGTCGCGCCGCGCTTCGGCGCCACCGTCGAGGAGGCCGCGTTCGACGCGGCCGTC GGCGCATGGAGGGTGCGTCTCGACGGCGGGGAGGTGCTCATGGCGCGGTGGCTCGTCGTC GCGACGGGGGAGAACGCCGAGCCGCGGGTGCCGGACTTTCCCGGCATGCAGAAGTTCGCC GGGTGTGCCATGCATACTTCCGAGTACAAGTCCGGCGAGCAGTTTGCCGGTAAGAAGGTG TTGGTCGTGGGATGCGGGAATTCTGGCATGGAAGTGAGCTTGGATTTGTGCCGGCATGGC GCGAAGCCCTCCATGGTGGTGCGCAACACGGTGCATGTCCTACCAAGGGAAATGTTCGGT CTATCCACGTTCGGCATCGCCATGGCGCTGCTGCGATGGCTACCGGTTCAGCTCGTCGAC CGGTTCCTTCTCACGGCGGCTCACCTCATCCTCGGTAACACGGGGCAGTTCGGCCTAAGG CGGCCCAAAACAGGGCCCATCGAGCTCAAGAACCTCACCGGCAGGACACCCGTACTGGAC GTTGGGACGCTAGACCACATCAAATCCGGCAAAATTAAGGTAGTGGGAGCAGTGAAGGAG ATGACGAGGCAAGGGGTCAGGTTCACGGATGGCAAGGAGGAGCAATTCGACACAATAATC CTCGCCACAGGCTACAGGAGCAACGTGCCATCTTGGCTCAAGGTAAAGCAGAGTGTGACT CACTCTTGTTCGTTTTATTTTTCTTTCTGTCCGCACTGCACTATACTACTACTAGTGATA TATATCTCGAGATGA

Peptide Sequence

PEP ID	Os01t0645400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:25994669:25996837:1 gene:Os01g0645400 transcript:Os01t0645400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YUCCA-LIKE GENE 1 description:Flavin monooxygenase-like enzyme , Auxin biosynthesis (Os01t0645400-01);Flavin monooxygenase-like enzyme , Auxin biosynthesis (Os01t0645400-02)
Sequence	MDNKPAQERRETWVPGAVIVGAGPSGLAAAACLAARGVPATVLERSDSLASTWRHRMYDR LALHLPKRFCELPLLPFPEEYPTYPSKDQFVAYMEAYAAAAGVAPRFGATVEEAAFDAAV GAWRVRLDGGEVLMARWLVVATGENAEPRVPDFPGMQKFAGCAMHTSEYKSGEQFAGKKV LVVGCGNSGMEVSLDLCRHGAKPSMVVRNTVHVLPREMFGLSTFGIAMALLRWLPVQLVD RFLLTAAHLILGNTGQFGLRRPKTGPIELKNLTGRTPVLDVGTLDHIKSGKIKVVGAVKE MTRQGVRFTDGKEEQFDTIILATGYRSNVPSWLKVKQSVTHSCSFYFSFCPHCTILLLVI YISR

Transcript Sequence

Transcript ID	Os01t0645400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:25994669:25996837:1 gene:Os01g0645400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YUCCA-LIKE GENE 1 description:Flavin monooxygenase-like enzyme , Auxin biosynthesis (Os01t0645400-01);Flavin monooxygenase-like enzyme , Auxin biosynthesis (Os01t0645400-02)
Sequence	ACCTAGTTGGCAGTAAAAAAAGCGCCGCTACCTACACACACAACCGCTCTGCACAAGGGG CCATGGACAACAAGCCGGCGCAAGAACGCCGCGAGACGTGGGTCCCGGGCGCCGTCATCG TCGGCGCGGGCCCGTCGGGGCTCGCCGCGGCGGCGTGCCTCGCGGCGCGGGGCGTTCCGG CGACGGTGCTTGAGCGGTCCGACTCGCTGGCGTCCACGTGGCGCCACCGCATGTACGACC GCCTCGCTCTCCACCTGCCCAAGCGCTTCTGCGAGCTGCCGCTCCTCCCGTTCCCGGAGG AGTACCCGACGTACCCGTCCAAGGACCAGTTCGTGGCGTACATGGAGGCGTACGCCGCGG CGGCGGGCGTCGCGCCGCGCTTCGGCGCCACCGTCGAGGAGGCCGCGTTCGACGCGGCCG TCGGCGCATGGAGGGTGCGTCTCGACGGCGGGGAGGTGCTCATGGCGCGGTGGCTCGTCG TCGCGACGGGGGAGAACGCCGAGCCGCGGGTGCCGGACTTTCCCGGCATGCAGAAGTTCG CCGGGTGTGCCATGCATACTTCCGAGTACAAGTCCGGCGAGCAGTTTGCCGGTAAGAAGG TGTTGGTCGTGGGATGCGGGAATTCTGGCATGGAAGTGAGCTTGGATTTGTGCCGGCATG GCGCGAAGCCCTCCATGGTGGTGCGCAACACGGTGCATGTCCTACCAAGGGAAATGTTCG GTCTATCCACGTTCGGCATCGCCATGGCGCTGCTGCGATGGCTACCGGTTCAGCTCGTCG ACCGGTTCCTTCTCACGGCGGCTCACCTCATCCTCGGTAACACGGGGCAGTTCGGCCTAA GGCGGCCCAAAACAGGGCCCATCGAGCTCAAGAACCTCACCGGCAGGACACCCGTACTGG ACGTTGGGACGCTAGACCACATCAAATCCGGCAAAATTAAGGTAGTGGGAGCAGTGAAGG AGATGACGAGGCAAGGGGTCAGGTTCACGGATGGCAAGGAGGAGCAATTCGACACAATAA TCCTCGCCACAGGCTACAGGAGCAACGTGCCATCTTGGCTCAAGGTAAAGCAGAGTGTGA CTCACTCTTGTTCGTTTTATTTTTCTTTCTGTCCGCACTGCACTATACTACTACTAGTGA TATATATCTCGAGATGATACGGATTATATGGTCAACTGTCAAGCCCAAGGATGTTAATTA TATGTCTATATGTACGTGTGCTTTATGTGTTGTAGGATGCCGGTGACTTGTTCACGAGGG AGGGCATTTCCAAGGTCCCCTTCCCTAACAGCTGGAGAGGGCGGAATGGTCTCTACACCG TCGGATTCACTCAGCGGGGGCTCCTCGGCACGTCATCGGACGCCCTCAACGTCGCCAAAG ACATACATTGCCAATGGAGAGAAAGGGACCGATCTGCTATTAATGTACTTGAAATAAGCA ACTCTTCCTTTTGATTTGACTGGAAATGTACAGTGTTTTGATTAGGAATATTGTATTGTG TGCATATAACACCATGTTCTATCTCCCTTTTCAAC