Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0645000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:25959883:25961440:-1 gene:Os01g0645000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 9 description:Similar to TIS11 protein (dTIS11). (Os01t0645000-01)
Sequence	CTTCGATCGGCACTGCCCCGAGAGGAAGCGCTTGTCTCCCCGGTGCGCTCGGCATTGGAG CTCAAGCCGTTCAACTTCGGAGACCAGCGGCTCGCGTCCTCGCCGCGCTACCTCCCCAGC GGCGACGACGCCCTGTACCGCTGCTCCTCCCCCTTCAGCCCCAGCTTCGGGTTCTCCTCG CCGTCGCCGCTAGCCACCTCCGTCTCGCTCTCGCCGTCCTCCTCCGCCTCCCTCGTCGAT GACGGCGACGACGGAGGAGCGGCCGCCGACGCCACGGGGCAGCGGCTCCAGCTCGCGCGC CTCGCGCTGCAGTACCAGGAGGTGGCCGACCGCTACGAGCTTTGCCTCTCCCACCTCGCC GAGGCCGCCGAAGAGGCGGCGGCGCTCCGTCTTGAGAACGCCGAGCTCCGCGTCACCAAC AGCGACCTCGCCCTCCGTCTCGCGCTGCTCAGCGGGAAGCATACCGCCGCCGTCGCCGTC GCCGACGAGATCCGTCGGCTCCGCCTCGGCGAGCAGAAGGTCGCGGCCGCCACCAAGGAG CGCACGCCCGAGAAGCTCGCCGTGCTGCCGAAGAGCATCTCCGTGCGGTCCACAAGCTAC CTCAAGCTGAACCAGCAATCCCAGGCCGCCACCGCCACTTCGGCGGCCCCCAACCGCAAG CCCCGCACGTCGTCGAACCCAACCAACCCCCCGAACTCGCAGCGCGCGTACGACGGCGGC AAGAAAGGCGACGAGCAGAAGGCGCAACCCGCGGACAGCGGCGCGGAGCTGGAGGTGTAC AACCAGGGCATGTTCAAGACGGAGCTGTGCAACAAGTGGGAGGAGACGGGAGACTGCCCC TACGGCGACCAGTGCCAGTTCGCGCACGGCGTCACCGAGCTCCGCCCCGTCATCCGCCAC CCTCGCTACAAGACCGCGGTGTGCCGCATGGTGCTCGCCGGCGACGTCTGCCCCTACGGC CACCGTTGCCACTTCCGCCACTCGCTCACCCCCGCCGAACGCCTCCTCCTCCGATCCTAG

Peptide Sequence

PEP ID	Os01t0645000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:25959883:25961440:-1 gene:Os01g0645000 transcript:Os01t0645000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 9 description:Similar to TIS11 protein (dTIS11). (Os01t0645000-01)
Sequence	LRSALPREEALVSPVRSALELKPFNFGDQRLASSPRYLPSGDDALYRCSSPFSPSFGFSS PSPLATSVSLSPSSSASLVDDGDDGGAAADATGQRLQLARLALQYQEVADRYELCLSHLA EAAEEAAALRLENAELRVTNSDLALRLALLSGKHTAAVAVADEIRRLRLGEQKVAAATKE RTPEKLAVLPKSISVRSTSYLKLNQQSQAATATSAAPNRKPRTSSNPTNPPNSQRAYDGG KKGDEQKAQPADSGAELEVYNQGMFKTELCNKWEETGDCPYGDQCQFAHGVTELRPVIRH PRYKTAVCRMVLAGDVCPYGHRCHFRHSLTPAERLLLRS

Transcript Sequence

Transcript ID	Os01t0645000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:25959883:25961440:-1 gene:Os01g0645000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 9 description:Similar to TIS11 protein (dTIS11). (Os01t0645000-01)
Sequence	AACCTCCTCCGTCGTCCTCTCCCCCGAATCAGCTGGTCTCTAGCTTCGATCGGCACTGCC CCGAGAGGAAGCGCTTGTCTCCCCGGTGCGCTCGGCATTGGAGCTCAAGCCGTTCAACTT CGGAGACCAGCGGCTCGCGTCCTCGCCGCGCTACCTCCCCAGCGGCGACGACGCCCTGTA CCGCTGCTCCTCCCCCTTCAGCCCCAGCTTCGGGTTCTCCTCGCCGTCGCCGCTAGCCAC CTCCGTCTCGCTCTCGCCGTCCTCCTCCGCCTCCCTCGTCGATGACGGCGACGACGGAGG AGCGGCCGCCGACGCCACGGGGCAGCGGCTCCAGCTCGCGCGCCTCGCGCTGCAGTACCA GGAGGTGGCCGACCGCTACGAGCTTTGCCTCTCCCACCTCGCCGAGGCCGCCGAAGAGGC GGCGGCGCTCCGTCTTGAGAACGCCGAGCTCCGCGTCACCAACAGCGACCTCGCCCTCCG TCTCGCGCTGCTCAGCGGGAAGCATACCGCCGCCGTCGCCGTCGCCGACGAGATCCGTCG GCTCCGCCTCGGCGAGCAGAAGGTCGCGGCCGCCACCAAGGAGCGCACGCCCGAGAAGCT CGCCGTGCTGCCGAAGAGCATCTCCGTGCGGTCCACAAGCTACCTCAAGCTGAACCAGCA ATCCCAGGCCGCCACCGCCACTTCGGCGGCCCCCAACCGCAAGCCCCGCACGTCGTCGAA CCCAACCAACCCCCCGAACTCGCAGCGCGCGTACGACGGCGGCAAGAAAGGCGACGAGCA GAAGGCGCAACCCGCGGACAGCGGCGCGGAGCTGGAGGTGTACAACCAGGGCATGTTCAA GACGGAGCTGTGCAACAAGTGGGAGGAGACGGGAGACTGCCCCTACGGCGACCAGTGCCA GTTCGCGCACGGCGTCACCGAGCTCCGCCCCGTCATCCGCCACCCTCGCTACAAGACCGC GGTGTGCCGCATGGTGCTCGCCGGCGACGTCTGCCCCTACGGCCACCGTTGCCACTTCCG CCACTCGCTCACCCCCGCCGAACGCCTCCTCCTCCGATCCTAGCTAAATTAAGGCAGTGC GCGGCCAGTCTTTTGCACCACCTGGATGGTTTATTGCTTTCGCATGTATACTATATACGA TTATACACACGAAAATGTACAAAAATACGAACATCGTAAATAACACATAAGAGGTACGTA CAGGGTACAGGAAGCCATATGGTAGAGCTAGTAGCACCGATATTGTAATGTGAATATCCA CAAACAGGATTAGTGTTTTCGTC