Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0644900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:25957753:25958568:1 gene:Os01g0644900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0644900-01)
Sequence

ATGGCGGCAGCCGTAGAGGAGGCCTTCCCGATCGGGTTCACGAAGGGGATACGGTCCTAC
TGGCGAAGCCGCAAGTACCATAGCGTGGACAGCAGCGCGGCGGGCCGCGGCACGAGCAAC
CTGGTGCGGCTCGGGGGCGGAAGCGGCAGCGGCAGCGACGGCGGGGCGTGGGCCGTGCGG
CTGGGAGGCATGTTCCGCACGCGCGTCAAGGCGGCGGCGCCCGCGGCGACGACGACCGCC
GTGGCGAAGGTACCCGCGCGCGTGCTGGGGCGGGTACGGGACGCGTACGTGGACGCCATG
GTCGGCGTGGCCAAGAAGCAGGCGGCCGCGGCGCTGTCGCAGCCGGGAGCCGGGACGACG
GAGGCGCTGTGGCAGAAGCGCGTGCCGGTACGACGGTCGCGCGGGCAGAGCAAGAAGCAG
CTGCGGCAGAAGGCGGACGAGCTCGGGCAGAGACTGGTCATGGAGATGTACAAGTCCGTC
CTCGCGTCGAGGGACCTCTCCAGCATGCTCCAGGCATCAAGGGCGCAATAG

Peptide Sequence

PEP ID

Os01t0644900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:25957753:25958568:1 gene:Os01g0644900 transcript:Os01t0644900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0644900-01)
Sequence

MAAAVEEAFPIGFTKGIRSYWRSRKYHSVDSSAAGRGTSNLVRLGGGSGSGSDGGAWAVR
LGGMFRTRVKAAAPAATTTAVAKVPARVLGRVRDAYVDAMVGVAKKQAAAALSQPGAGTT
EALWQKRVPVRRSRGQSKKQLRQKADELGQRLVMEMYKSVLASRDLSSMLQASRAQ

Transcript Sequence

Transcript ID

Os01t0644900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:25957753:25958568:1 gene:Os01g0644900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0644900-01)
Sequence

AAGTGCTCAAACCCTCTCAAGTTTCATCATCACCCAACACAATCGCAAGCAGCTAGCAAC
AGGGCCAACCCGACGAACGTGAGATGGCGGCAGCCGTAGAGGAGGCCTTCCCGATCGGGT
TCACGAAGGGGATACGGTCCTACTGGCGAAGCCGCAAGTACCATAGCGTGGACAGCAGCG
CGGCGGGCCGCGGCACGAGCAACCTGGTGCGGCTCGGGGGCGGAAGCGGCAGCGGCAGCG
ACGGCGGGGCGTGGGCCGTGCGGCTGGGAGGCATGTTCCGCACGCGCGTCAAGGCGGCGG
CGCCCGCGGCGACGACGACCGCCGTGGCGAAGGTACCCGCGCGCGTGCTGGGGCGGGTAC
GGGACGCGTACGTGGACGCCATGGTCGGCGTGGCCAAGAAGCAGGCGGCCGCGGCGCTGT
CGCAGCCGGGAGCCGGGACGACGGAGGCGCTGTGGCAGAAGCGCGTGCCGGTACGACGGT
CGCGCGGGCAGAGCAAGAAGCAGCTGCGGCAGAAGGCGGACGAGCTCGGGCAGAGACTGG
TCATGGAGATGTACAAGTCCGTCCTCGCGTCGAGGGACCTCTCCAGCATGCTCCAGGCAT
CAAGGGCGCAATAGCATGCAACACTACATCGTGCAAAAGTGATGCATCCGCGCAAGCTTA
ACGTGAACTAACGGCTGTATATAAGGAGATGTACATATGTTTGTTGCACAATATGCATGG
CCAGACCGGCTAGAAGACACTTATTAGACGCTCATAACCCTTGGATTCCCTTTCATCCCT
AGAAAAGAAAATCCGTGTTCCCTTCTGTTGCTTTTT