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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0643900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:25923454:25924149:1 gene:Os01g0643900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oleosin family protein. (Os01t0643900-01)
Sequence

ATGGCAGACCGACCACCCGCCGCGCGCGCAGCCTTACCCGGTCCGCCCCGGCCGCTGCGC
GGCCAAGCGCACACGGACCTCCCGCTCCGCCGGCGCATCCAGCATCACGCGTACGACTCC
GCGAGGCTCGTCGGTTTCCTCGCCCTGGCTGTCACCCTCGCGGCGCTCCTTGTCCTCGCG
GGCGTCACGCTCACCGTCGCCTTCGTCGCGCTTGTCGTCCTCAGCCCGCTCCTGCTCCTC
ACCAGCCCTCTCTGGGTGCCGATGGCCGCCGCGGTCTTCGTCTCCGGGGCCGCCTCGATC
ATCGGCTGGTGCCTCGCCGTGGGCGCGGTGGCGGCCGGCACGTGGGCGTACCGGTACTTC
ACGGGGCGGCATCGTCGACCCGTGGGCGCACACCGGGTGGACTACGACGTCGGCGCGGGC
ACCGCGAGCGGCTGGATGGGCTACTACGCGCGGGAGTACGGCGCGCGCCCCCGCGTCCAC
GTGAAGGACGCCGCTCCCGGGGCGTAG

Peptide Sequence

PEP ID

Os01t0643900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:25923454:25924149:1 gene:Os01g0643900 transcript:Os01t0643900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oleosin family protein. (Os01t0643900-01)
Sequence

MADRPPAARAALPGPPRPLRGQAHTDLPLRRRIQHHAYDSARLVGFLALAVTLAALLVLA
GVTLTVAFVALVVLSPLLLLTSPLWVPMAAAVFVSGAASIIGWCLAVGAVAAGTWAYRYF
TGRHRRPVGAHRVDYDVGAGTASGWMGYYAREYGARPRVHVKDAAPGA

Transcript Sequence

Transcript ID

Os01t0643900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:25923454:25924149:1 gene:Os01g0643900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oleosin family protein. (Os01t0643900-01)
Sequence

GATTCACTCTCCTAGTCCTAGAGTCCTGGTCCATCTTTCTTGGCTTCTTGATATGGCAGA
CCGACCACCCGCCGCGCGCGCAGCCTTACCCGGTCCGCCCCGGCCGCTGCGCGGCCAAGC
GCACACGGACCTCCCGCTCCGCCGGCGCATCCAGCATCACGCGTACGACTCCGCGAGGCT
CGTCGGTTTCCTCGCCCTGGCTGTCACCCTCGCGGCGCTCCTTGTCCTCGCGGGCGTCAC
GCTCACCGTCGCCTTCGTCGCGCTTGTCGTCCTCAGCCCGCTCCTGCTCCTCACCAGCCC
TCTCTGGGTGCCGATGGCCGCCGCGGTCTTCGTCTCCGGGGCCGCCTCGATCATCGGCTG
GTGCCTCGCCGTGGGCGCGGTGGCGGCCGGCACGTGGGCGTACCGGTACTTCACGGGGCG
GCATCGTCGACCCGTGGGCGCACACCGGGTGGACTACGACGTCGGCGCGGGCACCGCGAG
CGGCTGGATGGGCTACTACGCGCGGGAGTACGGCGCGCGCCCCCGCGTCCACGTGAAGGA
CGCCGCTCCCGGGGCGTAGGCGGCACGCGGCTCTCCTTGCCGCGTGTGGCGTCTCGACTC
TCGCGGACGTACTCTCGGTGTCGCCGTGCGTGTCTCCATGCCATATGTTTTGTAGTGTCA
CGCCTTGAGCGCTATATATATTGCAAGTTTGCAACT