Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0643300-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:25863960:25868266:1 gene:Os01g0643300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 10A description:Auxin efflux carrier protein, Auxin transport, Drought tolerance (Os01t0643300-01);Similar to Auxin efflux carrier protein. (Os01t0643300-02)
Sequence	ATGATATCCGGGCACGACTTCTACACGGTGATGGCGGCGGTGGTGCCGCTGTACGTGGCG ATGTTCCTGGCGTACGGGTCGGTGCGGTGGTGGGGCATCTTCACGCCGGACCAGTGCTCC GGCATCAACCGCTTCGTCGCCATCTTCGCCGTGCCGCTCCTGTCCTTCCACTTCATCTCC ACCAACGACCCGTACGCCATGAACCTCCGCTTCCTGGCGGCGGACACGCTGCAGAAGCTG CTCGTCCTGGCGGGGCTCGCCGCGTGGTCGCGCCTCCCCTCGCGGACCGGCGCGCCGCGG CTGGACTGGTCCATCACGCTCTTCTCCCTCTCCACGCTGCCCAACACGCTCGTCATGGGG ATCCCGCTGCTGATCGCCATGTACGGGCCATACTCCGGCTCGCTCATGGTCCAGATCGTC GTGCTCCAGTGCATCATCTGGTACACGCTGATGCTCTTCCTCTTCGAGTTCCGCGCCGCG CGGATGCTGATCGCCGACCAGTTCCCGGACACGGCGGCGTCCATCGTGTCCCTGCACGTC GACCCGGACGTGGTGTCGCTGGAGGGCGGCCACGCGGAGACGGAGGCCGAGGTGGCGGCG GACGGGCGGCTGCACGTCACCGTGCGCCGGTCCTCGGTGTCGCGGCGGTCGCTGCTGGTC ACGCCGCGGCCGTCGAACCTGACGGGAGCGGAGATCTACTCGCTTAGCTCGTCGCGGAAC CCAACCCCGCGGGGCTCCAACTTCAACCACGCCGACTTCTTCGCCATGGTCGGCGGCGGG CCACCGCCCCCGACGCCCGCTGCGGTGCGCGGCTCGAGCTTCGGCGCCTCCGAGCTCTAC TCGCTGCAATCGTCGCGGGGCCCAACCCCGAGGCAGTCCAACTTCGACGAGCACTCGGCA CGGCCGCCGAAACCACCGGCAACGACCACGGGGGCACTCAACCACGATGCCAAGGAGCTC CACATGTTCGTGTGGAGCTCGAGCGCGTCTCCCGTCTCAGAAGTCAGCGGCCTGCCTGTG TTCAGTGGCGGCGGCGGCGGCGGCGCTCTCGACGTCGGCGCCAAGGAAATCCACATGGTC ATCCCCGCCGACCTGCCGCAGAACAACGGCTCAGGCAAAGAGCACGAGGAGTACGGCGCA GTGGCATTGGGTGGCGGCGGCGGCGGAGAGAACTTCAGCTCGACGGCGGAGCTGCACCCG AAGGTCGTCGACGTCGACGGACCGAACGCCGGCGGCGGCGCCGCGGGCGCGGGGCAGTAC CAAATGCCGCCGGCGAGCGTGATGACACGCCTCATCCTCATAATGGTGTGGCGCAAGCTC ATCCGCAACCCCAACACTTACTCCAGCCTCCTCGGCCTCGCCTGGTCCCTCGTCGCCTTC CGGTGGCACGTCTCCATGCCAGCAATCGTCGAGAAGTCCATCTCCATTCTCTCGGACGCA GGCCTGGGGATGGCCATGTTTAGCCTGGGATTGTTCATGGCGCTGCAGCCCAGCATCATC GCGTGTGGCAAATCAGCCGCCGTCGTCTCCATGGCCGTCCGCTTCCTCGCGGGCCCTGCC GTCATGGCCGCCGCGTCAATCGCCATCGGACTCCGCGGGACGCTCCTGCACGTCGCCATT GTTCAGGCGGCTCTACCACAAGGGATTGTGCCTTTTGTTTTTGCAAAAGAATACAATGTC CACCCGGCCATCCTGAGCACAGCGGTAATTTTTGGCATGCTAATAGCTCTTCCAATCACA TTGCTGTACTACATCCTTCTTGGACTATGA

Peptide Sequence

PEP ID	Os01t0643300-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:25863960:25868266:1 gene:Os01g0643300 transcript:Os01t0643300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 10A description:Auxin efflux carrier protein, Auxin transport, Drought tolerance (Os01t0643300-01);Similar to Auxin efflux carrier protein. (Os01t0643300-02)
Sequence	MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPDTAASIVSLHV DPDVVSLEGGHAETEAEVAADGRLHVTVRRSSVSRRSLLVTPRPSNLTGAEIYSLSSSRN PTPRGSNFNHADFFAMVGGGPPPPTPAAVRGSSFGASELYSLQSSRGPTPRQSNFDEHSA RPPKPPATTTGALNHDAKELHMFVWSSSASPVSEVSGLPVFSGGGGGGALDVGAKEIHMV IPADLPQNNGSGKEHEEYGAVALGGGGGGENFSSTAELHPKVVDVDGPNAGGGAAGAGQY QMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDA GLGMAMFSLGLFMALQPSIIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAI VQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL

Transcript Sequence

Transcript ID	Os01t0643300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:25863960:25868266:1 gene:Os01g0643300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 10A description:Auxin efflux carrier protein, Auxin transport, Drought tolerance (Os01t0643300-01);Similar to Auxin efflux carrier protein. (Os01t0643300-02)
Sequence	AAGAAGCCACTCCACTCGGCCGCTCCTGCATGTATAACTAGCTAGTTCTAGCTCGCTCAG GCACTCGATCCACCGCCGGGCGCGTTGGATTGAGATAGGCTGAGGAGATGATATCCGGGC ACGACTTCTACACGGTGATGGCGGCGGTGGTGCCGCTGTACGTGGCGATGTTCCTGGCGT ACGGGTCGGTGCGGTGGTGGGGCATCTTCACGCCGGACCAGTGCTCCGGCATCAACCGCT TCGTCGCCATCTTCGCCGTGCCGCTCCTGTCCTTCCACTTCATCTCCACCAACGACCCGT ACGCCATGAACCTCCGCTTCCTGGCGGCGGACACGCTGCAGAAGCTGCTCGTCCTGGCGG GGCTCGCCGCGTGGTCGCGCCTCCCCTCGCGGACCGGCGCGCCGCGGCTGGACTGGTCCA TCACGCTCTTCTCCCTCTCCACGCTGCCCAACACGCTCGTCATGGGGATCCCGCTGCTGA TCGCCATGTACGGGCCATACTCCGGCTCGCTCATGGTCCAGATCGTCGTGCTCCAGTGCA TCATCTGGTACACGCTGATGCTCTTCCTCTTCGAGTTCCGCGCCGCGCGGATGCTGATCG CCGACCAGTTCCCGGACACGGCGGCGTCCATCGTGTCCCTGCACGTCGACCCGGACGTGG TGTCGCTGGAGGGCGGCCACGCGGAGACGGAGGCCGAGGTGGCGGCGGACGGGCGGCTGC ACGTCACCGTGCGCCGGTCCTCGGTGTCGCGGCGGTCGCTGCTGGTCACGCCGCGGCCGT CGAACCTGACGGGAGCGGAGATCTACTCGCTTAGCTCGTCGCGGAACCCAACCCCGCGGG GCTCCAACTTCAACCACGCCGACTTCTTCGCCATGGTCGGCGGCGGGCCACCGCCCCCGA CGCCCGCTGCGGTGCGCGGCTCGAGCTTCGGCGCCTCCGAGCTCTACTCGCTGCAATCGT CGCGGGGCCCAACCCCGAGGCAGTCCAACTTCGACGAGCACTCGGCACGGCCGCCGAAAC CACCGGCAACGACCACGGGGGCACTCAACCACGATGCCAAGGAGCTCCACATGTTCGTGT GGAGCTCGAGCGCGTCTCCCGTCTCAGAAGTCAGCGGCCTGCCTGTGTTCAGTGGCGGCG GCGGCGGCGGCGCTCTCGACGTCGGCGCCAAGGAAATCCACATGGTCATCCCCGCCGACC TGCCGCAGAACAACGGCTCAGGCAAAGAGCACGAGGAGTACGGCGCAGTGGCATTGGGTG GCGGCGGCGGCGGAGAGAACTTCAGCTCGACGGCGGAGCTGCACCCGAAGGTCGTCGACG TCGACGGACCGAACGCCGGCGGCGGCGCCGCGGGCGCGGGGCAGTACCAAATGCCGCCGG CGAGCGTGATGACACGCCTCATCCTCATAATGGTGTGGCGCAAGCTCATCCGCAACCCCA ACACTTACTCCAGCCTCCTCGGCCTCGCCTGGTCCCTCGTCGCCTTCCGGTGGCACGTCT CCATGCCAGCAATCGTCGAGAAGTCCATCTCCATTCTCTCGGACGCAGGCCTGGGGATGG CCATGTTTAGCCTGGGATTGTTCATGGCGCTGCAGCCCAGCATCATCGCGTGTGGCAAAT CAGCCGCCGTCGTCTCCATGGCCGTCCGCTTCCTCGCGGGCCCTGCCGTCATGGCCGCCG CGTCAATCGCCATCGGACTCCGCGGGACGCTCCTGCACGTCGCCATTGTTCAGGCGGCTC TACCACAAGGGATTGTGCCTTTTGTTTTTGCAAAAGAATACAATGTCCACCCGGCCATCC TGAGCACAGCGGTAATTTTTGGCATGCTAATAGCTCTTCCAATCACATTGCTGTACTACA TCCTTCTTGGACTATGATCAAGAAAGCTTATGGACGCTCTCACATAAAACGGAAGAAATG GGGGCAAAGAGAGAGAAAAAAAAGCGATCCTGTCCATCTCAAACAGCGTATGCTTATATG TATAGCCTGTTGTCGGACATTGCCCATGATGACAAGACAACGAAGTTGTTACAGAGCTAT ATATCTCTGCGACATTTGTACAAGAGATAACGACAGAATGTACTCAAATATAACCGATAT TAGATATGTGTTCTGTTAAAGATCTCAAC