Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0642600-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:25825625:25826696:-1 gene:Os01g0642600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF617, plant family protein. (Os01t0642600-00)
Sequence	ATGAGGACCATCATGGCGAGGAGCCCTCACGAGTCATCCTTCTCCTTCTCCAGGAGGCAC TTCAAGTGGCCAGTTCTTGGCAAGAGCAGCAGCCATGGCGCCAGCAATGCAGGGGAGGAC GACTTCATCAAGGCAGAGGACGACGAGGAGGCCACCATGGCCTTCTCCTCCACCTGCCCG TCGTTCCACTCCGAGGACTTCGTGTCCCCTCCGCCCTGCAAGCCGCTCAAGCAGCAGCAG CAGCAGCAGCCGCAGCAGCAGCGCAGGAAGGGACGCACGGCCGTGTCCCGCCTGCGCACG GCGCTGGCCGCGGCCCTCGCCGGCCGGCACCGCCAGGTCGGGCTCGGCGCCCGGCTCACC GGCACGCTCTACGGGCACCGCCGCGGCCACGTCCACCTCGCGTTCCAGGTGGACCCGCGC GCGTGCCCCGCGCTGCTCCTGGAGCTGGCCGCGCCCACGGCGTCGCTGGTGCGCGAGATG GCCTCGGGCCTCGTGCGCATCGCGCTCGAGTGCGAGCGCGCCAAGGGCGGCGGCGCCTGC GCGTTCCCCACCGCCGCCGCGGCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGC GCCGGCGGCAGGAAGCTGGTGGAGGAGACGGTGTGGCGCGCGTACTGCAACGGCAGGAGC TGCGGGTACGCGGTGCGGCGCGAGTGCGGCGCCGCGGACTGGCGCGTGCTGCGCGCGCTG GAGCCCGTGTCCATGGGCGCGGGTGTCATACCGGCGGCGTGCGGCGGCGGGGAGGGCGAC GTCATGTACATGCGCGCGCGGTTCGAGCGCGTCGTTGGCTCCCGCGACTCCGAGGCGTTC TACATGATGAACCCGGACTGCGGCGGCAGCGGCAGCAACAACAATGGCGGCCCGGAGCTC AGCGTCTACCTCCTTAGAGTTTGA

Peptide Sequence

PEP ID	Os01t0642600-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:25825625:25826696:-1 gene:Os01g0642600 transcript:Os01t0642600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF617, plant family protein. (Os01t0642600-00)
Sequence	MRTIMARSPHESSFSFSRRHFKWPVLGKSSSHGASNAGEDDFIKAEDDEEATMAFSSTCP SFHSEDFVSPPPCKPLKQQQQQQPQQQRRKGRTAVSRLRTALAAALAGRHRQVGLGARLT GTLYGHRRGHVHLAFQVDPRACPALLLELAAPTASLVREMASGLVRIALECERAKGGGAC AFPTAAAAPSSSSSSSSSSSAGGRKLVEETVWRAYCNGRSCGYAVRRECGAADWRVLRAL EPVSMGAGVIPAACGGGEGDVMYMRARFERVVGSRDSEAFYMMNPDCGGSGSNNNGGPEL SVYLLRV

Transcript Sequence

Transcript ID	Os01t0642600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:25825625:25826696:-1 gene:Os01g0642600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF617, plant family protein. (Os01t0642600-00)
Sequence	TAGAAAAGAACACACCGCGGTCACACACACTCTCTTCAGCAACAAACGATGAGGACCATC ATGGCGAGGAGCCCTCACGAGTCATCCTTCTCCTTCTCCAGGAGGCACTTCAAGTGGCCA GTTCTTGGCAAGAGCAGCAGCCATGGCGCCAGCAATGCAGGGGAGGACGACTTCATCAAG GCAGAGGACGACGAGGAGGCCACCATGGCCTTCTCCTCCACCTGCCCGTCGTTCCACTCC GAGGACTTCGTGTCCCCTCCGCCCTGCAAGCCGCTCAAGCAGCAGCAGCAGCAGCAGCCG CAGCAGCAGCGCAGGAAGGGACGCACGGCCGTGTCCCGCCTGCGCACGGCGCTGGCCGCG GCCCTCGCCGGCCGGCACCGCCAGGTCGGGCTCGGCGCCCGGCTCACCGGCACGCTCTAC GGGCACCGCCGCGGCCACGTCCACCTCGCGTTCCAGGTGGACCCGCGCGCGTGCCCCGCG CTGCTCCTGGAGCTGGCCGCGCCCACGGCGTCGCTGGTGCGCGAGATGGCCTCGGGCCTC GTGCGCATCGCGCTCGAGTGCGAGCGCGCCAAGGGCGGCGGCGCCTGCGCGTTCCCCACC GCCGCCGCGGCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGCGCCGGCGGCAGG AAGCTGGTGGAGGAGACGGTGTGGCGCGCGTACTGCAACGGCAGGAGCTGCGGGTACGCG GTGCGGCGCGAGTGCGGCGCCGCGGACTGGCGCGTGCTGCGCGCGCTGGAGCCCGTGTCC ATGGGCGCGGGTGTCATACCGGCGGCGTGCGGCGGCGGGGAGGGCGACGTCATGTACATG CGCGCGCGGTTCGAGCGCGTCGTTGGCTCCCGCGACTCCGAGGCGTTCTACATGATGAAC CCGGACTGCGGCGGCAGCGGCAGCAACAACAATGGCGGCCCGGAGCTCAGCGTCTACCTC CTTAGAGTTTGATCACTCGAGCGTCTCCCATTCTCACGTTTTCTTGTATCGTGTCAGTTC TTGCATGCTTTGTTGTTTCCTGTTGTAGGCTAGTAGTACTTTAGTAGGTAGT