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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0641700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:25777616:25781934:-1 gene:Os01g0641700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0121 domain containing protein. (Os01t0641700-01)
Sequence

ATGTCCTCAACCAGTTCTTCACAGCCACCAGCATCGTCAGATAGAGAATCTACACCAGCC
AGTGATAATGCAACATCTCCTGATTCAGATGGCACGAATTCTGCTGGACCCGCAAGAAGC
AGAATTGCACTGCAGTTGGATCAGCGGTCATTGCATTTTTCTGTTACTGCTTGGGTTCTT
ATTGTTGCATTGATTGGAATCCTTCCACTGACACCACGACAACTGCAATATAAGGGATAT
CGTTTGTCACTTCTCGGCACAACCTGCACCACAGGCTATGCTTTGTTTGCTTTTTATCGG
CTACCAAGAGCAGGAAACATGCATGCTGCTCAGATCTTTCACCATGTAGCTTCGTCAAAG
GATTTTATACCATTCATGTACTGTCTTATGTTTGTCATGTCTAAACTGCACTTGAAGCTT
GTTTTGGTACCAGTGATTTGCTGGGCACTTGAACATGTGGCCAGATTTCTACGGCGCCAT
TTTACTAATTCCTCTCTATACAGGACATATCTGGAGAAACCTTGCACATGGGTTGAGACA
AACACAACTGCAGTCAAATTCCTGAGTTCAAATGCGGAGATTTTGTTGGGATTTCTTTTG
ATTTTGTCTCTGTTCTCGCGACAACGCAATCCTATGCAAACGTTCATGTACTGGCAGTTA
CTGAAGCTCATGTATCACTCTCCTTTCACTGCCGGTTATCACAGAGCTATCTGGCTTAAA
ATTGGCCGTACAGTTAATCCCTATATCCATCGCTACACTCCTTTTCTTCATGACCCGATA
AATGCTGGCATGAGATGGTGGTTCAGGTAG

Peptide Sequence

PEP ID

Os01t0641700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:25777616:25781934:-1 gene:Os01g0641700 transcript:Os01t0641700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0121 domain containing protein. (Os01t0641700-01)
Sequence

MSSTSSSQPPASSDRESTPASDNATSPDSDGTNSAGPARSRIALQLDQRSLHFSVTAWVL
IVALIGILPLTPRQLQYKGYRLSLLGTTCTTGYALFAFYRLPRAGNMHAAQIFHHVASSK
DFIPFMYCLMFVMSKLHLKLVLVPVICWALEHVARFLRRHFTNSSLYRTYLEKPCTWVET
NTTAVKFLSSNAEILLGFLLILSLFSRQRNPMQTFMYWQLLKLMYHSPFTAGYHRAIWLK
IGRTVNPYIHRYTPFLHDPINAGMRWWFR

Transcript Sequence

Transcript ID

Os01t0641700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:25777616:25781934:-1 gene:Os01g0641700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0121 domain containing protein. (Os01t0641700-01)
Sequence

GGCCATGAACAAAGTTTTCGCTTTTTTTTTATGCGGGAGAGATGGGGATGATTATGCTTG
AGGGGGGATCTTGAGCGTGTGTATAGGATCGAGGGTTTTGAACCTGATTTCTGAAAGCGC
CTGGTTTGTGAGGCTCAAGAGTCTCTGCTTTTTGCCGGTTTGAGCTTTTAACGAAAGAGG
CGATGGGCTCTGTTCTGCTGAATTAGCCACCTCGAGGATGGGGAGGTTGAAGGATTGAAG
CTCTCTTTTCCTTTCGCAGAAGGTGTAGGATCCTGATTTTGTTCTTGAGGTATGTCCTCA
ACCAGTTCTTCACAGCCACCAGCATCGTCAGATAGAGAATCTACACCAGCCAGTGATAAT
GCAACATCTCCTGATTCAGATGGCACGAATTCTGCTGGACCCGCAAGAAGCAGAATTGCA
CTGCAGTTGGATCAGCGGTCATTGCATTTTTCTGTTACTGCTTGGGTTCTTATTGTTGCA
TTGATTGGAATCCTTCCACTGACACCACGACAACTGCAATATAAGGGATATCGTTTGTCA
CTTCTCGGCACAACCTGCACCACAGGCTATGCTTTGTTTGCTTTTTATCGGCTACCAAGA
GCAGGAAACATGCATGCTGCTCAGATCTTTCACCATGTAGCTTCGTCAAAGGATTTTATA
CCATTCATGTACTGTCTTATGTTTGTCATGTCTAAACTGCACTTGAAGCTTGTTTTGGTA
CCAGTGATTTGCTGGGCACTTGAACATGTGGCCAGATTTCTACGGCGCCATTTTACTAAT
TCCTCTCTATACAGGACATATCTGGAGAAACCTTGCACATGGGTTGAGACAAACACAACT
GCAGTCAAATTCCTGAGTTCAAATGCGGAGATTTTGTTGGGATTTCTTTTGATTTTGTCT
CTGTTCTCGCGACAACGCAATCCTATGCAAACGTTCATGTACTGGCAGTTACTGAAGCTC
ATGTATCACTCTCCTTTCACTGCCGGTTATCACAGAGCTATCTGGCTTAAAATTGGCCGT
ACAGTTAATCCCTATATCCATCGCTACACTCCTTTTCTTCATGACCCGATAAATGCTGGC
ATGAGATGGTGGTTCAGGTAGCATGGATATGGCTCAATTAATCATGTAAAGGTGTTTTTG
GTTACAGTTCACAGTTAACACATGGAGGATCTTTTCAGTAAGTTGTAGTTTGCGAGCGAC
ATGTTTAGTACCTTTTCTTTTTGCGATGTTGCGCTGATATTACTTTTAGTTACTGACAAG
TAATTCTTGTAACTTTACCTTGACTGTAGAACTAGTGTAGACCTTAGTAATATGGCCAAT
ACCATGAAGTGAAAAATGGAAAAGCAATTTATTACTATG