Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0637600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:25585914:25589162:-1 gene:Os01g0637600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:peptide deformylase 1B description:Similar to Peptide deformylase, chloroplast precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase). (Os01t0637600-01)
Sequence	ATGGCCGCGCGCCTTCACCTCCGCCTCGGCCCCCGCCTCCGCGGGTTCGCGTCCTCCTTC GCCCCCCTCCTCGCCGCGCACCCCAGAGCGCTGCCCCTCTCCCGCATGGGCTCGGTGGCG CCTCTCGCGGCGGCACGCGCCCGCCGCGGCTTCGGTTCCGCCGTCGCCACCGCGCCGCCG GCCGAGGACGAGGACTTCGCCACAGCTGCTGACCTCCAGTTCGAGCCGCCGCTCAAGGTC GTGAAGTACCCCGACCCAATCCTACGGGCTCGCAACAAGCGCATCAACACCTTCGATGAC AACCTCCGCAGCCTCACTGATGAGATGTTCGACGTTATGTACAAGACTGATGGAATTGGT CTCTCTGCACCACAAGTTGGGGTGAATGTACAGCTTATGGTATTTAATCCAGCTGGTGTG AAGGGAGAAGGAGAGGAGATTGTCCTTGTCAACCCGGTTGTATACAAAATGTCGAAGAGA TTGTTAGTGTATGAGGAAGGCTGCTTATCATTCCCTGGGATATATGCCAATGTGGTGAGA CCAGACAATGTCAAAATTGATGCTCAGGATGTTACAGGGGCAAAGATTAAAGTTAAATTG TCAGGTCTGTCTGCAAGAGTTTTCCAACATGAATTTGATCATTTACAGGGGATTCTTTTC TTTGACAGGATGTCTCTTGATGTTCTTGAGAGCGTGCGTGAGGGACTGAAGGACCTAGAG AAGAAATATGAGGAAAGTACAGGGCTAGTAAGCCCTGAAAGTATTGAGAACTACAAAGGA AGAAAGGATCTCATTAGTTTCTCAAGATGA

Peptide Sequence

PEP ID	Os01t0637600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:25585914:25589162:-1 gene:Os01g0637600 transcript:Os01t0637600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:peptide deformylase 1B description:Similar to Peptide deformylase, chloroplast precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase). (Os01t0637600-01)
Sequence	MAARLHLRLGPRLRGFASSFAPLLAAHPRALPLSRMGSVAPLAAARARRGFGSAVATAPP AEDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIG LSAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVR PDNVKIDAQDVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLE KKYEESTGLVSPESIENYKGRKDLISFSR

Transcript Sequence

Transcript ID	Os01t0637600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:25585914:25589162:-1 gene:Os01g0637600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:peptide deformylase 1B description:Similar to Peptide deformylase, chloroplast precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase). (Os01t0637600-01)
Sequence	ACCGCCCAATCGCTGCCGCGTGCGGGGGAAAAAATCGTCGACTCCCCCACCACCATGGCC GCGCGCCTTCACCTCCGCCTCGGCCCCCGCCTCCGCGGGTTCGCGTCCTCCTTCGCCCCC CTCCTCGCCGCGCACCCCAGAGCGCTGCCCCTCTCCCGCATGGGCTCGGTGGCGCCTCTC GCGGCGGCACGCGCCCGCCGCGGCTTCGGTTCCGCCGTCGCCACCGCGCCGCCGGCCGAG GACGAGGACTTCGCCACAGCTGCTGACCTCCAGTTCGAGCCGCCGCTCAAGGTCGTGAAG TACCCCGACCCAATCCTACGGGCTCGCAACAAGCGCATCAACACCTTCGATGACAACCTC CGCAGCCTCACTGATGAGATGTTCGACGTTATGTACAAGACTGATGGAATTGGTCTCTCT GCACCACAAGTTGGGGTGAATGTACAGCTTATGGTATTTAATCCAGCTGGTGTGAAGGGA GAAGGAGAGGAGATTGTCCTTGTCAACCCGGTTGTATACAAAATGTCGAAGAGATTGTTA GTGTATGAGGAAGGCTGCTTATCATTCCCTGGGATATATGCCAATGTGGTGAGACCAGAC AATGTCAAAATTGATGCTCAGGATGTTACAGGGGCAAAGATTAAAGTTAAATTGTCAGGT CTGTCTGCAAGAGTTTTCCAACATGAATTTGATCATTTACAGGGGATTCTTTTCTTTGAC AGGATGTCTCTTGATGTTCTTGAGAGCGTGCGTGAGGGACTGAAGGACCTAGAGAAGAAA TATGAGGAAAGTACAGGGCTAGTAAGCCCTGAAAGTATTGAGAACTACAAAGGAAGAAAG GATCTCATTAGTTTCTCAAGATGAATAGCTTTCGGTTCTGGCAGTTTTTCAAAACATCCT GCTGAGCTTCACATTGAAGATTGTGTATTAGAACAGTTGCCAGTATCACATATTCTTCTG TCATTCTACTTTTTGCCAGTCTTGCTGTATCTAGTTTTGTGCAACACCAGTGATATTACA ACCAGAAATTATGCTAGTGATG