Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0636700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:25524187:25532029:-1 gene:Os01g0636700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CSB description:DEAD-like helicase, N-terminal domain containing protein. (Os01t0636700-01)
Sequence	ATGGTACAGATTAAGGAACTTGGCGAGGGCAGCAGCCATGCTGGGCAAGTTGTTATAAGA GGGCTGCCTAGCGAATTGTCATATGCTGACCTAGCAGACTATTTCATTAAATATGGAAAG ATAGTTGATTTGATTATTATCAGGGCCAAGGGCACAGCCCAGGCAGGGGATTCTGCTAAA ATTACTTATGCCGATGCTGCCATTTCTGATAAAATAATCAAGTGCAGGCATATTATCAAA GGAAAACATGTTGTAGTTGATAGAACATTAATGGAAGACACCATTCAGTATAAGGACAAG AAGACAAACCGGAGGATAACTCTGGATGGCCTTCCCTGGACAGTGTCCAATGATGATATT GTGCACTTCTTCTCTCCATATGGAACAGTAGTTGACCATCAGATCACTCAGAAGGATGAA AATAAACTTTCTGAAGGATCAGGGTTTGTGCTCTTCAGTTCTGAGCTAGCTGTAATTAAA ATTCTCTCAAATGGCAACACTGTTAATCTTGGTGGTGAAAAGGTGTCTATTAATAGATCA GGTGCTTTTGTTATCGCAGCAACTGGACACCATATAAAACACCCCTTTCTCCTTCCTAGT GAGATATTTTCTAGTCTCTTCCCTCATCAAAAGGATGGGCTTGAATGGCTCTGGAGGCTC CACTGTGAAAAATCCGGTGGGGGAATTCTTGCGGATGATATGGGCCTAGGCAAAACCCGC CAGGCTTCAGCCTTTCTAGCTGGCCTTTTTTATTCCGATTTGACACAAAGGGTATTGATT GTTGCCCCGGGCACAATCTTGCATCAGTGGATTGCTGAATTAACAAAAGTTGGTTTTAAT GAAGATCTTATACATAGCTTCTGGTGTGCCAAGACAAGGCATGATTCTCTAGCGCAGGTG CTAAAGGAAGGTGGTGTTCTGCTTATTACGTATGATCTGGTGAGGTTGTATAATGAAGAA CTAAACGGCATGAGCAGTAAAAGCTCAAAGATGAGAAGAGCTTGTCCTTCATGGGACTAT GTGATTCTTGATGAGGGTCACGTGCTGAAGAACCCAAATACGAAAAATGCTGCTGCGCTG AAAAGCTTATCTCGTGGGCAAACAGTTGTCCTCACAGGAACACCGGTTCAAAATAACCTT TCGGAATTTCATTCACTAATGAGTCTTTGCTGTCCTACTGTCTTGGGCTCTCTTGCTGCT TTTGAAAGAGACTTCTGTAAACCAATTGACATGGGAAATGTGCTTGAGGCAACAACTGAA GTAGTAATGATATCTTCTAAAAAGGCCATGGAGTTCCGCAAAATGGTGCGACCTTATTTT CTTAGGCGCACCAAGGAAAGTATTGAAAGCCTTTTACCTAATAAAGCTGATCTTGTCATC TGGCTGAAGCTAACGCCATATCAGATATAA

Peptide Sequence

PEP ID	Os01t0636700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:25524187:25532029:-1 gene:Os01g0636700 transcript:Os01t0636700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CSB description:DEAD-like helicase, N-terminal domain containing protein. (Os01t0636700-01)
Sequence	MVQIKELGEGSSHAGQVVIRGLPSELSYADLADYFIKYGKIVDLIIIRAKGTAQAGDSAK ITYADAAISDKIIKCRHIIKGKHVVVDRTLMEDTIQYKDKKTNRRITLDGLPWTVSNDDI VHFFSPYGTVVDHQITQKDENKLSEGSGFVLFSSELAVIKILSNGNTVNLGGEKVSINRS GAFVIAATGHHIKHPFLLPSEIFSSLFPHQKDGLEWLWRLHCEKSGGGILADDMGLGKTR QASAFLAGLFYSDLTQRVLIVAPGTILHQWIAELTKVGFNEDLIHSFWCAKTRHDSLAQV LKEGGVLLITYDLVRLYNEELNGMSSKSSKMRRACPSWDYVILDEGHVLKNPNTKNAAAL KSLSRGQTVVLTGTPVQNNLSEFHSLMSLCCPTVLGSLAAFERDFCKPIDMGNVLEATTE VVMISSKKAMEFRKMVRPYFLRRTKESIESLLPNKADLVIWLKLTPYQI

Transcript Sequence

Transcript ID	Os01t0636700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:25524187:25532029:-1 gene:Os01g0636700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CSB description:DEAD-like helicase, N-terminal domain containing protein. (Os01t0636700-01)
Sequence	CCGTTGTAAATCCGCTCCAATTGACTCTACCAACCCACCCGTGCTCTCTCCTGCCGTGCT CGTCGACAGCAATCAGAACTCGGAAGCCGACCGGGAAGTCGCCGCGCCGCCATCGTGCTC GCCGCCGGTCGCCGTCTCGGAGGAGGAAAAAAGAAAGGAAAAACTGCAGCGATGGTACAG ATTAAGGAACTTGGCGAGGGCAGCAGCCATGCTGGGCAAGTTGTTATAAGAGGGCTGCCT AGCGAATTGTCATATGCTGACCTAGCAGACTATTTCATTAAATATGGAAAGATAGTTGAT TTGATTATTATCAGGGCCAAGGGCACAGCCCAGGCAGGGGATTCTGCTAAAATTACTTAT GCCGATGCTGCCATTTCTGATAAAATAATCAAGTGCAGGCATATTATCAAAGGAAAACAT GTTGTAGTTGATAGAACATTAATGGAAGACACCATTCAGTATAAGGACAAGAAGACAAAC CGGAGGATAACTCTGGATGGCCTTCCCTGGACAGTGTCCAATGATGATATTGTGCACTTC TTCTCTCCATATGGAACAGTAGTTGACCATCAGATCACTCAGAAGGATGAAAATAAACTT TCTGAAGGATCAGGGTTTGTGCTCTTCAGTTCTGAGCTAGCTGTAATTAAAATTCTCTCA AATGGCAACACTGTTAATCTTGGTGGTGAAAAGGTGTCTATTAATAGATCAGGTGCTTTT GTTATCGCAGCAACTGGACACCATATAAAACACCCCTTTCTCCTTCCTAGTGAGATATTT TCTAGTCTCTTCCCTCATCAAAAGGATGGGCTTGAATGGCTCTGGAGGCTCCACTGTGAA AAATCCGGTGGGGGAATTCTTGCGGATGATATGGGCCTAGGCAAAACCCGCCAGGCTTCA GCCTTTCTAGCTGGCCTTTTTTATTCCGATTTGACACAAAGGGTATTGATTGTTGCCCCG GGCACAATCTTGCATCAGTGGATTGCTGAATTAACAAAAGTTGGTTTTAATGAAGATCTT ATACATAGCTTCTGGTGTGCCAAGACAAGGCATGATTCTCTAGCGCAGGTGCTAAAGGAA GGTGGTGTTCTGCTTATTACGTATGATCTGGTGAGGTTGTATAATGAAGAACTAAACGGC ATGAGCAGTAAAAGCTCAAAGATGAGAAGAGCTTGTCCTTCATGGGACTATGTGATTCTT GATGAGGGTCACGTGCTGAAGAACCCAAATACGAAAAATGCTGCTGCGCTGAAAAGCTTA TCTCGTGGGCAAACAGTTGTCCTCACAGGAACACCGGTTCAAAATAACCTTTCGGAATTT CATTCACTAATGAGTCTTTGCTGTCCTACTGTCTTGGGCTCTCTTGCTGCTTTTGAAAGA GACTTCTGTAAACCAATTGACATGGGAAATGTGCTTGAGGCAACAACTGAAGTAGTAATG ATATCTTCTAAAAAGGCCATGGAGTTCCGCAAAATGGTGCGACCTTATTTTCTTAGGCGC ACCAAGGAAAGTATTGAAAGCCTTTTACCTAATAAAGCTGATCTTGTCATCTGGCTGAAG CTAACGCCATATCAGATATAATTATATGAAACATTTATGAAGAGCAATTTGATTGATAAG ACAGTGAAGGGATCAACATTTGTTGCAACAATGCTGCTCCAAAAGATATGCAACCATCCT CAGAACTTGACAGCTGTAGATTCCTGTGAGGAACAATTAGCGTTGAAAGAAAACAGGACG TTACAGGGCATTGTCAAAAAACTTGAAGCTTTGATTGCAAAGAATACCACAAAGACATCA AATTGTCTCAAGTCATGCAAGCTTACATTTATACTGCAATTGTTGGAAAAACTTAAGGAA GAAGGGCACAAGGTGCTAATTTTCTCACAGACGCGCCTAATGCTTGATGAAATAGAGGAG GCACTAACCAACAAGGGAGTACATTTTGCTCGTATGGATGGGACTGTTACAGCTTCTAAA AGAGAAGCTATTATTAAGGGCTTTCAAAGTAAAGATGGGCCTCCCATATTTTTAATGACC ACAAAAGTGGGTGGTATAGGTCTAAATTTAACTAATGCTTCCAGAGTTATCATCGCTGAT CCATCTTGGAATCCGAGCCTGGATAATCAATGCGTTGATAGAGTGTACAGAATTGGACAG GAGAAGAATGTCATCATCTATAGGCTTATAACCTCGTGTACTATTGAGGAAAGAATATAT GAAAAACAGGTATCCAAAGAAGGGATTTTCAAAGCTGCAACAGAAGAACGTGATTTCAGG CGCTACATCAACAAACTGGGTTACAAAGAATTTTTAAAACTTCCTGAGATGGGTTTCGGA ACATCCTTATTACAGAAAAGGCTTGAGATAGAGACCATGACAGATAACATTAGGGCAACA TTGAAGAGTCATTTGATATTTTTGAGACAGCAAGGTATAGTAGGCGTATCAGTTCACAAC ACATTGTTTGAGAAAACAATTAATCTTCCTCCTCAAAAGATTGATATGAAGTATCTTCCT CCTCAAAAGATTGATATGGGTGATGAAAATAGAAGTACGGTTGGGCATTCAAGATCTCAG CACCGCCGATCGCTTTCAGATAGTTGCATAGATTGGTCTGAGTTAGCAGTGAATCCAAAA GCAAAACCTGTTAGAAATACATCATTCAGAGTTGAAAAAGTTGAAGTAGACCGGACTGTG AAAATTGAAGCTAAAAGGGCTGAGCTAGAATGCAAGACTAAGTTGTATGAACATATCAAG GAAGCAGCTCATGACTCTGGAGCCAATGTTCTTCGACAAATGAAGGCTATTGAAAAAGAG ATTTCTGAACTAACATCACAAGAAGAGATAGAAGAAAAGAAAAGGAAAGGGGGTTAGCGA TGGTCAAACTGCTGAAGAACTCGCGCCAAGTGAAATCTGCCAGTAGACATTTATTGTTGT CTTCCTTTTGCTTTTTTTTGGGGTTCAGGTTTGTATTGCTGTAGAAGCTGGCGATGATGT AGAATTTGTGCCAGTAGAAATTGGTGCTCCAGGATGCAAACAACAAAGTTCATTGGTCGA TTGACTTTTTACTCTCTGTGTCTGTGTCTCAGTTTGCTTTTTGGTTAAGTTCAATGGAGA TCGAACATGGTAC