Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0636400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:25501902:25504409:-1 gene:Os01g0636400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os01t0636400-01)
Sequence

ATGGTGAACTTGGTGGAAGCGCCGAAGCCGCTGGTGTACTTCCTCCTGAGGAGGGCAGGG
CTCCGGCAGCACACCGTCGACGTCGACGGCGCCGGCACGGTGATCAGCTTCTGGATGCCC
GAGGGCAAGGTCCCCAAGGACAGGGGCACCGTGCGGGACGTCGCGCCCGAAGGCGCAGCA
GCAGCTGACAGCGGCAAGCAGCAGAAGGCGGCGGCGAAGCCCGCCGGCAACGGCAAGGAG
AGGCCCGCCGTCGTGCTCGTGCACGGCTTCGCCGCCGAGGGCGTCGTCACGTGGCAGTTC
CAGGCTGGTGTGCTGGCGAAGCACTACGACGTGTACGTGCCGGACCTGCTCTACTTCGGC
GGGTCGACGTCGCCGTCGACGGACCGGTCGCCGGGGTTCCAGGCGGAGTGCCTCGCGGCG
GCGCTGCGGAAGCTCGGGGTGGAGCGGTGCACGGTGGTGGGGTTCAGCTACGGCGGGATG
GTGTCGTTCAAGATGGCGGAGTCACACCCGGACCTGGTCACCTCCCTCGTCGTGTCCGGC
TCCGTCATCGCCATGACCGACTCCATCAGCGAGGCCTCGCTGGAGAGGATCGGCGTCAAG
TCGTCGGCCGAGCTGCTGCTGCCGGAGACCGTCAAGGGACTCAAGGCGCTGCTCTCCATT
GCCACCCACAGGAAGCTCTGGTTCCCTGACCGCATTCACAGAGACTACCTCGAGGTGATG
TTCACCAACCGAAAGGAAAGAGCCGAGCTGCTGGAAGGTTTGGTGGTCAGCAACAAAGAC
GCCACCGTGCCCGTTCTGCCGCAGAAAATACTCCTGCTATGGGGGGAGAACGACAACATT
TTCAACATTGAGCTCGCCATGACGATGAAAGAGCAGCTCGGAGAGAAGGCAATGCTGCAG
AGCATCAGCAAGGCAGGGCACCTGGTTCACATAGAGAGGCCCTGCGTCTACAACCAGCAC
CTCAAGGAGTTCCTCGCGTACGTCAACGCTGAATCCCCCAAGGAGACCGCCTGA

Peptide Sequence

PEP ID

Os01t0636400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:25501902:25504409:-1 gene:Os01g0636400 transcript:Os01t0636400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os01t0636400-01)
Sequence

MVNLVEAPKPLVYFLLRRAGLRQHTVDVDGAGTVISFWMPEGKVPKDRGTVRDVAPEGAA
AADSGKQQKAAAKPAGNGKERPAVVLVHGFAAEGVVTWQFQAGVLAKHYDVYVPDLLYFG
GSTSPSTDRSPGFQAECLAAALRKLGVERCTVVGFSYGGMVSFKMAESHPDLVTSLVVSG
SVIAMTDSISEASLERIGVKSSAELLLPETVKGLKALLSIATHRKLWFPDRIHRDYLEVM
FTNRKERAELLEGLVVSNKDATVPVLPQKILLLWGENDNIFNIELAMTMKEQLGEKAMLQ
SISKAGHLVHIERPCVYNQHLKEFLAYVNAESPKETA

Transcript Sequence

Transcript ID

Os01t0636400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:25501902:25504409:-1 gene:Os01g0636400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os01t0636400-01)
Sequence

AAACACACACACACACACACAAAGGTTGCTACTACCACCATCTAGTCCTCCAGTACTCTG
TGCATTGCAAGGAGAGCAGAGTAAGGCAGGATCCATGGTGAACTTGGTGGAAGCGCCGAA
GCCGCTGGTGTACTTCCTCCTGAGGAGGGCAGGGCTCCGGCAGCACACCGTCGACGTCGA
CGGCGCCGGCACGGTGATCAGCTTCTGGATGCCCGAGGGCAAGGTCCCCAAGGACAGGGG
CACCGTGCGGGACGTCGCGCCCGAAGGCGCAGCAGCAGCTGACAGCGGCAAGCAGCAGAA
GGCGGCGGCGAAGCCCGCCGGCAACGGCAAGGAGAGGCCCGCCGTCGTGCTCGTGCACGG
CTTCGCCGCCGAGGGCGTCGTCACGTGGCAGTTCCAGGCTGGTGTGCTGGCGAAGCACTA
CGACGTGTACGTGCCGGACCTGCTCTACTTCGGCGGGTCGACGTCGCCGTCGACGGACCG
GTCGCCGGGGTTCCAGGCGGAGTGCCTCGCGGCGGCGCTGCGGAAGCTCGGGGTGGAGCG
GTGCACGGTGGTGGGGTTCAGCTACGGCGGGATGGTGTCGTTCAAGATGGCGGAGTCACA
CCCGGACCTGGTCACCTCCCTCGTCGTGTCCGGCTCCGTCATCGCCATGACCGACTCCAT
CAGCGAGGCCTCGCTGGAGAGGATCGGCGTCAAGTCGTCGGCCGAGCTGCTGCTGCCGGA
GACCGTCAAGGGACTCAAGGCGCTGCTCTCCATTGCCACCCACAGGAAGCTCTGGTTCCC
TGACCGCATTCACAGAGACTACCTCGAGGTGATGTTCACCAACCGAAAGGAAAGAGCCGA
GCTGCTGGAAGGTTTGGTGGTCAGCAACAAAGACGCCACCGTGCCCGTTCTGCCGCAGAA
AATACTCCTGCTATGGGGGGAGAACGACAACATTTTCAACATTGAGCTCGCCATGACGAT
GAAAGAGCAGCTCGGAGAGAAGGCAATGCTGCAGAGCATCAGCAAGGCAGGGCACCTGGT
TCACATAGAGAGGCCCTGCGTCTACAACCAGCACCTCAAGGAGTTCCTCGCGTACGTCAA
CGCTGAATCCCCCAAGGAGACCGCCTGATTTGCTCTGAAGAATTGGAGTTCCACGCTCCT
GAACTTTGTATTGGTTTGTTTTAGTTTGAAAAGACAAATATGTTCACGAACCGTAAAAAC
GCTTGTGCCTGGATTGAGAATTTGGGGACTCTGAATAGGTTTCAGCTGTTTAGATAAACT
GTAATGTGAGAATGAGTCAACGTACCTCATAAATGAATCGATTTGTTTTG