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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0633000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:25350681:25351536:-1 gene:Os01g0633000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L31. (Os01t0633000-01)
Sequence

ATGGCGCTCTCCCTCTCCACCTCCTTCCTCCCGACCCAAGCCGCCGCGGCGGCCACGAGG
ACCACCCTCCGCTCCCTCGTCCCCTCCCAGAGGATGCGGTGCTCGATGCGGAAGAAGGGG
CTGCACCCGGAGATCTACGAGGACGCGAAGGTGTACTGCAACGGGGAGCTGGTGCTGGTG
ACGGGGGGAACCAAGCCGGAGTACACGGTGGACGTGTGGTCGGGGAACCACCCCTACTAC
GTCGGCGACACGTCGGCGATGGTCGTCATGGACAGCCAGATCGAGAAGTTCCGCAAGAAG
TGGGGCCACATCAAGGAGTACTGGCCCGAGGACCAGTGGAGGGAGATGCACCCCGACGGC
GACCCGGAGTTCGACCCGGAGGAGGAGGGATCCGCCGGCGCCAGCTGA

Peptide Sequence

PEP ID

Os01t0633000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:25350681:25351536:-1 gene:Os01g0633000 transcript:Os01t0633000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L31. (Os01t0633000-01)
Sequence

MALSLSTSFLPTQAAAAATRTTLRSLVPSQRMRCSMRKKGLHPEIYEDAKVYCNGELVLV
TGGTKPEYTVDVWSGNHPYYVGDTSAMVVMDSQIEKFRKKWGHIKEYWPEDQWREMHPDG
DPEFDPEEEGSAGAS

Transcript Sequence

Transcript ID

Os01t0633000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:25350681:25351536:-1 gene:Os01g0633000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L31. (Os01t0633000-01)
Sequence

AACACACACCAGAAACCGATAAGGGACACGAAACAGGGGAATCCGGAGCAAAGTGCGACG
CGAGCGCGCGAGGAAGCAGCAGCCATGGCGCTCTCCCTCTCCACCTCCTTCCTCCCGACC
CAAGCCGCCGCGGCGGCCACGAGGACCACCCTCCGCTCCCTCGTCCCCTCCCAGAGGATG
CGGTGCTCGATGCGGAAGAAGGGGCTGCACCCGGAGATCTACGAGGACGCGAAGGTGTAC
TGCAACGGGGAGCTGGTGCTGGTGACGGGGGGAACCAAGCCGGAGTACACGGTGGACGTG
TGGTCGGGGAACCACCCCTACTACGTCGGCGACACGTCGGCGATGGTCGTCATGGACAGC
CAGATCGAGAAGTTCCGCAAGAAGTGGGGCCACATCAAGGAGTACTGGCCCGAGGACCAG
TGGAGGGAGATGCACCCCGACGGCGACCCGGAGTTCGACCCGGAGGAGGAGGGATCCGCC
GGCGCCAGCTGAGCCCCCGCTTCGCCTCTCGCCTCCGCCGCCGGCCTCGCCGGTGCGGTT
TCTCTTGGTTGATTTTGGGAATTGCGTAAAATGGATTAGCTCCTCTTGCTTGCGCCTCTC
GTTACACGTGCATTCGCATTGCTCTCTAGGTGTTCGATCGGTGTTCTCAGTGGATACGTG
TGATCATATTTGTGGTATCGAACTGTTTGTTCTCTGCCTGTACTCTTTGACATCGATATA
AAATGGAGATATTGCAATTTGCACACTC